EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000013026 (Gene tree)
Gene ID: 100712839
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 74533 bases
Position: chrDS562877.1:23693074-23767606
Accession: 100712839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000011726	Not1	PF04054.15	8.5e-153	1	1
ENSCPOP00000021847	Not1	PF04054.15	1.2e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045720	CNOT1-202	6735	-	ENSCPOP00000021847	2244 (aa)	-	A0A286X8U4
ENSCPOT00000013152	CNOT1-201	6885	XM_005004700	ENSCPOP00000011726	2294 (aa)	XP_005004757	H0VMT0

Gene Model

Click here to download ENSCPOG00000013026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013026	CNOT1	100	95.034	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSCPOG00000013026	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSCPOG00000013026	CNOT1	100	94.823	ENSAMEG00000017298	CNOT1	100	94.823	Ailuropoda_melanoleuca
ENSCPOG00000013026	CNOT1	90	85.908	ENSACIG00000016003	cnot1	100	86.234	Amphilophus_citrinellus
ENSCPOG00000013026	CNOT1	100	86.398	ENSAPEG00000022342	cnot1	100	86.776	Amphiprion_percula
ENSCPOG00000013026	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSCPOG00000013026	CNOT1	100	93.403	ENSAPLG00000007162	CNOT1	100	93.403	Anas_platyrhynchos
ENSCPOG00000013026	CNOT1	92	91.048	ENSACAG00000001602	CNOT1	98	91.327	Anolis_carolinensis
ENSCPOG00000013026	CNOT1	100	93.594	ENSANAG00000038198	CNOT1	100	93.594	Aotus_nancymaae
ENSCPOG00000013026	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSCPOG00000013026	CNOT1	100	87.048	ENSAMXG00000013170	cnot1	100	87.679	Astyanax_mexicanus
ENSCPOG00000013026	CNOT1	100	95.160	ENSBTAG00000020782	CNOT1	100	98.802	Bos_taurus
ENSCPOG00000013026	CNOT1	79	39.977	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSCPOG00000013026	CNOT1	100	94.992	ENSCJAG00000011318	CNOT1	100	94.992	Callithrix_jacchus
ENSCPOG00000013026	CNOT1	100	94.750	ENSCAFG00000008426	CNOT1	100	94.750	Canis_familiaris
ENSCPOG00000013026	CNOT1	100	94.927	ENSCAFG00020010156	CNOT1	100	95.229	Canis_lupus_dingo
ENSCPOG00000013026	CNOT1	100	95.160	ENSCHIG00000010452	CNOT1	100	95.160	Capra_hircus
ENSCPOG00000013026	CNOT1	100	95.160	ENSTSYG00000006888	CNOT1	100	95.160	Carlito_syrichta
ENSCPOG00000013026	CNOT1	100	93.434	ENSCCAG00000026333	CNOT1	100	93.434	Cebus_capucinus
ENSCPOG00000013026	CNOT1	100	95.076	ENSCATG00000032625	CNOT1	100	95.076	Cercocebus_atys
ENSCPOG00000013026	CNOT1	100	95.286	ENSCLAG00000006289	CNOT1	100	95.286	Chinchilla_lanigera
ENSCPOG00000013026	CNOT1	100	95.076	ENSCSAG00000004731	CNOT1	100	95.076	Chlorocebus_sabaeus
ENSCPOG00000013026	CNOT1	79	100.000	ENSCHOG00000009712	CNOT1	78	100.000	Choloepus_hoffmanni
ENSCPOG00000013026	CNOT1	95	98.472	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSCPOG00000013026	CNOT1	99	61.944	ENSCING00000009149	-	96	61.802	Ciona_intestinalis
ENSCPOG00000013026	CNOT1	91	63.188	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSCPOG00000013026	CNOT1	100	94.925	ENSCANG00000040534	CNOT1	100	94.925	Colobus_angolensis_palliatus
ENSCPOG00000013026	CNOT1	100	94.823	ENSCGRG00001016365	Cnot1	100	94.823	Cricetulus_griseus_chok1gshd
ENSCPOG00000013026	CNOT1	100	94.823	ENSCGRG00000001714	Cnot1	100	94.823	Cricetulus_griseus_crigri
ENSCPOG00000013026	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSCPOG00000013026	CNOT1	100	86.127	ENSDARG00000004174	cnot1	100	86.253	Danio_rerio
ENSCPOG00000013026	CNOT1	100	92.554	ENSDNOG00000013250	CNOT1	100	92.554	Dasypus_novemcinctus
ENSCPOG00000013026	CNOT1	99	52.759	FBgn0085436	Not1	97	52.672	Drosophila_melanogaster
ENSCPOG00000013026	CNOT1	82	98.851	ENSETEG00000012806	CNOT1	80	98.851	Echinops_telfairi
ENSCPOG00000013026	CNOT1	80	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSCPOG00000013026	CNOT1	95	99.630	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSCPOG00000013026	CNOT1	100	95.118	ENSECAG00000009889	CNOT1	100	95.118	Equus_caballus
ENSCPOG00000013026	CNOT1	90	92.949	ENSEEUG00000006015	CNOT1	90	92.949	Erinaceus_europaeus
ENSCPOG00000013026	CNOT1	100	86.051	ENSELUG00000014085	cnot1	100	86.151	Esox_lucius
ENSCPOG00000013026	CNOT1	100	94.838	ENSFCAG00000025155	CNOT1	100	94.838	Felis_catus
ENSCPOG00000013026	CNOT1	100	93.434	ENSFALG00000007285	CNOT1	100	93.434	Ficedula_albicollis
ENSCPOG00000013026	CNOT1	100	95.202	ENSFDAG00000013399	CNOT1	100	95.202	Fukomys_damarensis
ENSCPOG00000013026	CNOT1	100	86.518	ENSFHEG00000020574	cnot1	100	86.518	Fundulus_heteroclitus
ENSCPOG00000013026	CNOT1	92	85.622	ENSGMOG00000012864	cnot1	100	85.993	Gadus_morhua
ENSCPOG00000013026	CNOT1	100	93.519	ENSGALG00000002301	CNOT1	100	93.519	Gallus_gallus
ENSCPOG00000013026	CNOT1	100	85.390	ENSGAFG00000015005	cnot1	100	85.348	Gambusia_affinis
ENSCPOG00000013026	CNOT1	92	85.747	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSCPOG00000013026	CNOT1	100	93.437	ENSGAGG00000022646	CNOT1	100	93.956	Gopherus_agassizii
ENSCPOG00000013026	CNOT1	100	94.992	ENSGGOG00000009547	CNOT1	100	94.992	Gorilla_gorilla
ENSCPOG00000013026	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSCPOG00000013026	CNOT1	100	95.118	ENSHGLG00000014322	CNOT1	100	95.118	Heterocephalus_glaber_female
ENSCPOG00000013026	CNOT1	100	85.219	ENSHCOG00000006501	cnot1	100	85.678	Hippocampus_comes
ENSCPOG00000013026	CNOT1	100	85.151	ENSIPUG00000011915	cnot1	100	85.487	Ictalurus_punctatus
ENSCPOG00000013026	CNOT1	100	95.118	ENSSTOG00000005490	CNOT1	100	95.118	Ictidomys_tridecemlineatus
ENSCPOG00000013026	CNOT1	100	94.444	ENSJJAG00000000633	Cnot1	100	94.444	Jaculus_jaculus
ENSCPOG00000013026	CNOT1	100	86.407	ENSKMAG00000006149	cnot1	100	86.288	Kryptolebias_marmoratus
ENSCPOG00000013026	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSCPOG00000013026	CNOT1	100	91.077	ENSLACG00000010869	CNOT1	100	90.993	Latimeria_chalumnae
ENSCPOG00000013026	CNOT1	100	89.178	ENSLOCG00000006324	cnot1	100	89.178	Lepisosteus_oculatus
ENSCPOG00000013026	CNOT1	100	94.870	ENSLAFG00000000098	CNOT1	100	94.870	Loxodonta_africana
ENSCPOG00000013026	CNOT1	100	94.970	ENSMFAG00000035888	CNOT1	100	94.970	Macaca_fascicularis
ENSCPOG00000013026	CNOT1	100	95.034	ENSMMUG00000014625	CNOT1	100	95.034	Macaca_mulatta
ENSCPOG00000013026	CNOT1	100	92.390	ENSMNEG00000031820	CNOT1	100	94.582	Macaca_nemestrina
ENSCPOG00000013026	CNOT1	100	93.766	ENSMLEG00000040933	CNOT1	100	93.766	Mandrillus_leucophaeus
ENSCPOG00000013026	CNOT1	100	86.118	ENSMAMG00000016524	cnot1	100	86.366	Mastacembelus_armatus
ENSCPOG00000013026	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSCPOG00000013026	CNOT1	100	93.224	ENSMGAG00000001908	CNOT1	100	93.224	Meleagris_gallopavo
ENSCPOG00000013026	CNOT1	100	94.907	ENSMICG00000007071	CNOT1	100	94.907	Microcebus_murinus
ENSCPOG00000013026	CNOT1	100	94.865	ENSMOCG00000017969	Cnot1	100	94.865	Microtus_ochrogaster
ENSCPOG00000013026	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSCPOG00000013026	CNOT1	100	93.395	ENSMODG00000014199	CNOT1	100	93.395	Monodelphis_domestica
ENSCPOG00000013026	CNOT1	100	86.266	ENSMALG00000008645	cnot1	100	86.602	Monopterus_albus
ENSCPOG00000013026	CNOT1	94	99.666	MGP_CAROLIEiJ_G0031430	Cnot1	91	99.666	Mus_caroli
ENSCPOG00000013026	CNOT1	100	94.907	ENSMUSG00000036550	Cnot1	100	94.907	Mus_musculus
ENSCPOG00000013026	CNOT1	100	94.949	MGP_PahariEiJ_G0023028	Cnot1	100	94.949	Mus_pahari
ENSCPOG00000013026	CNOT1	100	94.907	MGP_SPRETEiJ_G0032549	Cnot1	100	94.907	Mus_spretus
ENSCPOG00000013026	CNOT1	100	95.118	ENSMPUG00000004830	CNOT1	100	95.118	Mustela_putorius_furo
ENSCPOG00000013026	CNOT1	100	94.697	ENSMLUG00000003728	CNOT1	100	94.697	Myotis_lucifugus
ENSCPOG00000013026	CNOT1	100	95.076	ENSNGAG00000018628	Cnot1	100	95.076	Nannospalax_galili
ENSCPOG00000013026	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSCPOG00000013026	CNOT1	100	94.949	ENSNLEG00000003566	CNOT1	100	94.949	Nomascus_leucogenys
ENSCPOG00000013026	CNOT1	86	95.139	ENSMEUG00000006145	CNOT1	87	95.139	Notamacropus_eugenii
ENSCPOG00000013026	CNOT1	85	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSCPOG00000013026	CNOT1	100	95.160	ENSODEG00000016337	CNOT1	100	95.160	Octodon_degus
ENSCPOG00000013026	CNOT1	100	86.893	ENSONIG00000007358	cnot1	100	86.533	Oreochromis_niloticus
ENSCPOG00000013026	CNOT1	92	93.197	ENSOANG00000012109	CNOT1	100	93.183	Ornithorhynchus_anatinus
ENSCPOG00000013026	CNOT1	100	95.076	ENSOCUG00000006911	CNOT1	100	95.076	Oryctolagus_cuniculus
ENSCPOG00000013026	CNOT1	100	86.457	ENSORLG00000013734	cnot1	100	86.661	Oryzias_latipes
ENSCPOG00000013026	CNOT1	100	86.615	ENSORLG00020017012	cnot1	100	86.675	Oryzias_latipes_hni
ENSCPOG00000013026	CNOT1	100	86.529	ENSORLG00015007091	cnot1	100	86.461	Oryzias_latipes_hsok
ENSCPOG00000013026	CNOT1	100	86.168	ENSOMEG00000015124	cnot1	100	86.721	Oryzias_melastigma
ENSCPOG00000013026	CNOT1	100	94.949	ENSOGAG00000000543	CNOT1	100	94.949	Otolemur_garnettii
ENSCPOG00000013026	CNOT1	100	95.160	ENSOARG00000001567	CNOT1	100	95.160	Ovis_aries
ENSCPOG00000013026	CNOT1	100	95.034	ENSPPAG00000022013	CNOT1	100	95.034	Pan_paniscus
ENSCPOG00000013026	CNOT1	100	95.118	ENSPPRG00000004867	CNOT1	100	95.118	Panthera_pardus
ENSCPOG00000013026	CNOT1	100	95.118	ENSPTIG00000012589	CNOT1	100	95.118	Panthera_tigris_altaica
ENSCPOG00000013026	CNOT1	100	94.927	ENSPTRG00000008183	CNOT1	100	94.927	Pan_troglodytes
ENSCPOG00000013026	CNOT1	100	94.496	ENSPANG00000020901	CNOT1	100	94.496	Papio_anubis
ENSCPOG00000013026	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSCPOG00000013026	CNOT1	100	88.418	ENSPKIG00000023538	CNOT1	100	88.586	Paramormyrops_kingsleyae
ENSCPOG00000013026	CNOT1	100	93.266	ENSPSIG00000005499	CNOT1	100	93.266	Pelodiscus_sinensis
ENSCPOG00000013026	CNOT1	100	78.076	ENSPMAG00000009381	cnot1	100	78.058	Petromyzon_marinus
ENSCPOG00000013026	CNOT1	97	98.472	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSCPOG00000013026	CNOT1	99	86.089	ENSPFOG00000003497	cnot1	100	86.004	Poecilia_formosa
ENSCPOG00000013026	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSCPOG00000013026	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSCPOG00000013026	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSCPOG00000013026	CNOT1	100	94.992	ENSPPYG00000007410	CNOT1	100	94.992	Pongo_abelii
ENSCPOG00000013026	CNOT1	90	90.119	ENSPCAG00000003241	CNOT1	90	90.119	Procavia_capensis
ENSCPOG00000013026	CNOT1	100	94.841	ENSPCOG00000027139	CNOT1	100	94.841	Propithecus_coquereli
ENSCPOG00000013026	CNOT1	100	92.508	ENSPVAG00000004243	CNOT1	100	92.508	Pteropus_vampyrus
ENSCPOG00000013026	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSCPOG00000013026	CNOT1	100	85.955	ENSPNAG00000000246	cnot1	100	86.501	Pygocentrus_nattereri
ENSCPOG00000013026	CNOT1	100	94.907	ENSRNOG00000012271	Cnot1	100	94.907	Rattus_norvegicus
ENSCPOG00000013026	CNOT1	100	92.863	ENSRBIG00000044598	CNOT1	100	92.863	Rhinopithecus_bieti
ENSCPOG00000013026	CNOT1	100	95.076	ENSRROG00000000906	CNOT1	100	95.076	Rhinopithecus_roxellana
ENSCPOG00000013026	CNOT1	58	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSCPOG00000013026	CNOT1	100	92.294	ENSSBOG00000029155	CNOT1	100	92.294	Saimiri_boliviensis_boliviensis
ENSCPOG00000013026	CNOT1	100	93.524	ENSSHAG00000012187	CNOT1	100	93.524	Sarcophilus_harrisii
ENSCPOG00000013026	CNOT1	100	88.394	ENSSFOG00015017614	cnot1	100	88.132	Scleropages_formosus
ENSCPOG00000013026	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSCPOG00000013026	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSCPOG00000013026	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSCPOG00000013026	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSCPOG00000013026	CNOT1	100	86.739	ENSSPAG00000018802	cnot1	100	86.697	Stegastes_partitus
ENSCPOG00000013026	CNOT1	100	94.992	ENSSSCG00000002799	CNOT1	100	98.802	Sus_scrofa
ENSCPOG00000013026	CNOT1	100	93.359	ENSTGUG00000005919	CNOT1	100	93.359	Taeniopygia_guttata
ENSCPOG00000013026	CNOT1	100	85.440	ENSTNIG00000018706	cnot1	100	85.208	Tetraodon_nigroviridis
ENSCPOG00000013026	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	78	100.000	Tupaia_belangeri
ENSCPOG00000013026	CNOT1	95	98.077	ENSTTRG00000008460	CNOT1	95	98.077	Tursiops_truncatus
ENSCPOG00000013026	CNOT1	100	95.118	ENSUAMG00000009251	CNOT1	100	95.118	Ursus_americanus
ENSCPOG00000013026	CNOT1	100	95.118	ENSUMAG00000021291	CNOT1	100	95.118	Ursus_maritimus
ENSCPOG00000013026	CNOT1	96	96.638	ENSVPAG00000008846	CNOT1	96	96.638	Vicugna_pacos
ENSCPOG00000013026	CNOT1	100	95.741	ENSVVUG00000024037	CNOT1	100	95.741	Vulpes_vulpes
ENSCPOG00000013026	CNOT1	100	85.978	ENSXETG00000015900	cnot1	100	86.272	Xenopus_tropicalis
ENSCPOG00000013026	CNOT1	100	85.558	ENSXCOG00000013552	cnot1	100	85.516	Xiphophorus_couchianus
ENSCPOG00000013026	CNOT1	100	85.600	ENSXMAG00000006031	cnot1	100	85.558	Xiphophorus_maculatus