EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000013194 (Gene tree)
Gene ID: 100717548
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 14
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 8041 bases
Position: chrDS562897.1:7212508-7220548
Accession: 100717548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000011877	zf-CCHC	PF00098.23	1.6e-07	1	1
ENSCPOP00000011877	RRM_5	PF13893.6	2.4e-08	1	2
ENSCPOP00000011877	RRM_5	PF13893.6	2.4e-08	2	2
ENSCPOP00000012327	RRM_5	PF13893.6	1.1e-06	1	1
ENSCPOP00000012327	RRM_1	PF00076.22	1.2e-34	1	2
ENSCPOP00000012327	RRM_1	PF00076.22	1.2e-34	2	2
ENSCPOP00000011877	RRM_1	PF00076.22	1.6e-34	1	2
ENSCPOP00000011877	RRM_1	PF00076.22	1.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000013321	RBM4-201	1897	XM_005003005	ENSCPOP00000011877	365 (aa)	XP_005003062	H0VN63
ENSCPOT00000013828	RBM4-202	1047	XM_005003008	ENSCPOP00000012327	143 (aa)	XP_005003065	H0VPB0

Gene Model

Click here to download ENSCPOG00000013194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000013194	RBM4	97	99.275	ENSCPOG00000013689	RBM4B	100	87.123
ENSCPOG00000013194	RBM4	92	38.983	ENSCPOG00000033318	SRSF7	81	35.135
ENSCPOG00000013194	RBM4	94	30.065	ENSCPOG00000002044	-	85	30.065
ENSCPOG00000013194	RBM4	69	30.000	ENSCPOG00000006074	-	90	30.000
ENSCPOG00000013194	RBM4	98	30.000	ENSCPOG00000008327	TIA1	84	30.000
ENSCPOG00000013194	RBM4	52	34.667	ENSCPOG00000011761	SRSF6	56	34.667
ENSCPOG00000013194	RBM4	97	45.000	ENSCPOG00000008019	RBM14	94	41.071
ENSCPOG00000013194	RBM4	50	32.500	ENSCPOG00000012164	RBMX	83	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013194	RBM4	100	99.301	ENSG00000173933	RBM4	100	99.301	Homo_sapiens
ENSCPOG00000013194	RBM4	99	73.224	ENSG00000248643	RBM14-RBM4	100	74.044	Homo_sapiens
ENSCPOG00000013194	RBM4	97	99.275	ENSG00000173914	RBM4B	97	99.275	Homo_sapiens
ENSCPOG00000013194	RBM4	100	99.178	ENSAMEG00000010914	RBM4	100	99.178	Ailuropoda_melanoleuca
ENSCPOG00000013194	RBM4	97	99.275	ENSAMEG00000010906	RBM4B	100	87.671	Ailuropoda_melanoleuca
ENSCPOG00000013194	RBM4	97	99.275	ENSANAG00000023478	RBM4B	97	99.275	Aotus_nancymaae
ENSCPOG00000013194	RBM4	100	95.804	ENSANAG00000033986	-	87	95.804	Aotus_nancymaae
ENSCPOG00000013194	RBM4	97	99.275	ENSBTAG00000000423	RBM4B	100	87.945	Bos_taurus
ENSCPOG00000013194	RBM4	100	97.260	ENSBTAG00000031688	RBM4	100	97.260	Bos_taurus
ENSCPOG00000013194	RBM4	97	99.275	ENSCJAG00000013666	RBM4B	97	99.275	Callithrix_jacchus
ENSCPOG00000013194	RBM4	97	99.275	ENSCAFG00000012378	RBM4B	100	87.397	Canis_familiaris
ENSCPOG00000013194	RBM4	100	99.178	ENSCAFG00000012388	RBM4	100	99.178	Canis_familiaris
ENSCPOG00000013194	RBM4	97	99.275	ENSCAFG00020015519	RBM4B	100	87.397	Canis_lupus_dingo
ENSCPOG00000013194	RBM4	100	99.178	ENSCAFG00020015515	RBM4	100	99.178	Canis_lupus_dingo
ENSCPOG00000013194	RBM4	97	99.275	ENSCHIG00000008907	RBM4B	100	87.945	Capra_hircus
ENSCPOG00000013194	RBM4	100	97.260	ENSCHIG00000020613	RBM4	100	97.260	Capra_hircus
ENSCPOG00000013194	RBM4	66	78.838	ENSTSYG00000009580	RBM4B	96	78.008	Carlito_syrichta
ENSCPOG00000013194	RBM4	94	86.916	ENSTSYG00000036168	-	86	86.916	Carlito_syrichta
ENSCPOG00000013194	RBM4	100	100.000	ENSCAPG00000016600	RBM4	100	100.000	Cavia_aperea
ENSCPOG00000013194	RBM4	97	99.275	ENSCAPG00000009570	RBM4B	100	87.123	Cavia_aperea
ENSCPOG00000013194	RBM4	100	96.503	ENSCCAG00000007508	-	100	96.503	Cebus_capucinus
ENSCPOG00000013194	RBM4	99	71.831	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSCPOG00000013194	RBM4	97	99.275	ENSCCAG00000016501	RBM4B	97	99.275	Cebus_capucinus
ENSCPOG00000013194	RBM4	97	99.275	ENSCATG00000035353	RBM4B	97	99.275	Cercocebus_atys
ENSCPOG00000013194	RBM4	100	100.000	ENSCLAG00000014756	RBM4	100	100.000	Chinchilla_lanigera
ENSCPOG00000013194	RBM4	97	99.275	ENSCLAG00000015287	RBM4B	100	87.123	Chinchilla_lanigera
ENSCPOG00000013194	RBM4	97	99.275	ENSCSAG00000008361	RBM4B	100	87.123	Chlorocebus_sabaeus
ENSCPOG00000013194	RBM4	62	97.797	ENSCHOG00000009753	RBM14-RBM4	100	97.797	Choloepus_hoffmanni
ENSCPOG00000013194	RBM4	97	99.275	ENSCHOG00000002892	RBM4B	100	88.219	Choloepus_hoffmanni
ENSCPOG00000013194	RBM4	100	94.406	ENSCPBG00000023800	-	100	73.560	Chrysemys_picta_bellii
ENSCPOG00000013194	RBM4	97	99.275	ENSCANG00000021868	RBM4B	97	99.275	Colobus_angolensis_palliatus
ENSCPOG00000013194	RBM4	100	99.301	ENSCGRG00001016609	-	100	99.301	Cricetulus_griseus_chok1gshd
ENSCPOG00000013194	RBM4	97	99.275	ENSCGRG00001024693	Rbm4b	100	85.753	Cricetulus_griseus_chok1gshd
ENSCPOG00000013194	RBM4	97	99.275	ENSCGRG00000012112	Rbm4b	100	85.753	Cricetulus_griseus_crigri
ENSCPOG00000013194	RBM4	100	99.301	ENSCGRG00000010183	-	100	99.301	Cricetulus_griseus_crigri
ENSCPOG00000013194	RBM4	97	99.275	ENSDNOG00000019500	-	100	87.671	Dasypus_novemcinctus
ENSCPOG00000013194	RBM4	100	98.630	ENSDNOG00000032390	RBM4	100	98.630	Dasypus_novemcinctus
ENSCPOG00000013194	RBM4	97	97.826	ENSDNOG00000045639	-	100	86.575	Dasypus_novemcinctus
ENSCPOG00000013194	RBM4	97	99.275	ENSDORG00000029108	Rbm4b	100	85.479	Dipodomys_ordii
ENSCPOG00000013194	RBM4	100	98.601	ENSDORG00000004538	-	100	98.601	Dipodomys_ordii
ENSCPOG00000013194	RBM4	62	62.996	ENSETEG00000018142	-	100	63.436	Echinops_telfairi
ENSCPOG00000013194	RBM4	100	97.808	ENSEASG00005005064	RBM4	100	97.808	Equus_asinus_asinus
ENSCPOG00000013194	RBM4	97	99.275	ENSEASG00005005068	RBM4B	100	87.397	Equus_asinus_asinus
ENSCPOG00000013194	RBM4	97	99.275	ENSECAG00000022987	RBM4B	100	87.123	Equus_caballus
ENSCPOG00000013194	RBM4	100	97.808	ENSECAG00000022940	RBM4	100	97.808	Equus_caballus
ENSCPOG00000013194	RBM4	97	98.551	ENSEEUG00000000058	RBM4B	100	86.849	Erinaceus_europaeus
ENSCPOG00000013194	RBM4	97	99.275	ENSFCAG00000007394	RBM4B	97	99.275	Felis_catus
ENSCPOG00000013194	RBM4	100	99.301	ENSFCAG00000029651	RBM4	100	99.301	Felis_catus
ENSCPOG00000013194	RBM4	97	97.826	ENSFALG00000002073	-	100	67.925	Ficedula_albicollis
ENSCPOG00000013194	RBM4	99	92.366	ENSFDAG00000013661	-	96	92.366	Fukomys_damarensis
ENSCPOG00000013194	RBM4	100	100.000	ENSFDAG00000005447	RBM4	100	100.000	Fukomys_damarensis
ENSCPOG00000013194	RBM4	97	99.275	ENSFDAG00000015530	RBM4B	100	87.123	Fukomys_damarensis
ENSCPOG00000013194	RBM4	97	97.826	ENSGALG00000040489	-	84	97.826	Gallus_gallus
ENSCPOG00000013194	RBM4	97	97.826	ENSGALG00000037946	-	100	74.734	Gallus_gallus
ENSCPOG00000013194	RBM4	97	97.101	ENSGAGG00000008553	-	100	73.890	Gopherus_agassizii
ENSCPOG00000013194	RBM4	100	96.503	ENSGGOG00000011698	RBM4B	97	99.275	Gorilla_gorilla
ENSCPOG00000013194	RBM4	98	77.857	ENSGGOG00000043023	-	98	78.832	Gorilla_gorilla
ENSCPOG00000013194	RBM4	97	65.942	ENSHGLG00000000117	-	95	65.479	Heterocephalus_glaber_female
ENSCPOG00000013194	RBM4	100	99.301	ENSHGLG00000009991	RBM4	100	99.301	Heterocephalus_glaber_female
ENSCPOG00000013194	RBM4	97	89.130	ENSHGLG00000002853	-	100	73.425	Heterocephalus_glaber_female
ENSCPOG00000013194	RBM4	97	99.275	ENSHGLG00000016412	-	100	87.397	Heterocephalus_glaber_female
ENSCPOG00000013194	RBM4	97	99.275	ENSHGLG00100003978	-	100	86.612	Heterocephalus_glaber_male
ENSCPOG00000013194	RBM4	97	89.130	ENSHGLG00100020033	-	100	74.499	Heterocephalus_glaber_male
ENSCPOG00000013194	RBM4	100	99.301	ENSHGLG00100003854	RBM4	100	99.301	Heterocephalus_glaber_male
ENSCPOG00000013194	RBM4	100	99.452	ENSSTOG00000022811	RBM4	100	99.452	Ictidomys_tridecemlineatus
ENSCPOG00000013194	RBM4	97	99.275	ENSSTOG00000011226	RBM4B	100	87.397	Ictidomys_tridecemlineatus
ENSCPOG00000013194	RBM4	93	75.940	ENSJJAG00000003168	-	92	74.627	Jaculus_jaculus
ENSCPOG00000013194	RBM4	97	95.620	ENSJJAG00000020870	Rbm4b	100	84.110	Jaculus_jaculus
ENSCPOG00000013194	RBM4	97	99.275	ENSLAFG00000002285	RBM4B	100	84.658	Loxodonta_africana
ENSCPOG00000013194	RBM4	97	99.275	ENSLAFG00000028147	-	100	95.890	Loxodonta_africana
ENSCPOG00000013194	RBM4	100	97.203	ENSMFAG00000033927	RBM4B	97	99.275	Macaca_fascicularis
ENSCPOG00000013194	RBM4	97	99.275	ENSMNEG00000043371	RBM4B	97	99.275	Macaca_nemestrina
ENSCPOG00000013194	RBM4	100	97.203	ENSMLEG00000028563	RBM4B	97	99.275	Mandrillus_leucophaeus
ENSCPOG00000013194	RBM4	97	99.275	ENSMAUG00000017027	Rbm4b	100	84.658	Mesocricetus_auratus
ENSCPOG00000013194	RBM4	100	95.105	ENSMICG00000003817	-	100	95.105	Microcebus_murinus
ENSCPOG00000013194	RBM4	100	97.203	ENSMICG00000047975	-	99	97.203	Microcebus_murinus
ENSCPOG00000013194	RBM4	99	98.582	ENSMICG00000003820	RBM4B	97	99.275	Microcebus_murinus
ENSCPOG00000013194	RBM4	97	99.275	ENSMOCG00000001835	Rbm4b	100	85.205	Microtus_ochrogaster
ENSCPOG00000013194	RBM4	97	97.101	ENSMODG00000008056	-	100	92.120	Monodelphis_domestica
ENSCPOG00000013194	RBM4	100	99.301	MGP_CAROLIEiJ_G0022516	-	100	99.301	Mus_caroli
ENSCPOG00000013194	RBM4	99	68.665	MGP_CAROLIEiJ_G0022514	-	100	69.482	Mus_caroli
ENSCPOG00000013194	RBM4	97	99.275	MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	Mus_caroli
ENSCPOG00000013194	RBM4	100	96.503	ENSMUSG00000033760	Rbm4b	94	96.503	Mus_musculus
ENSCPOG00000013194	RBM4	100	96.448	ENSMUSG00000096370	Gm21992	100	96.448	Mus_musculus
ENSCPOG00000013194	RBM4	100	99.301	ENSMUSG00000094936	Rbm4	100	99.419	Mus_musculus
ENSCPOG00000013194	RBM4	100	96.721	MGP_PahariEiJ_G0014011	-	100	96.721	Mus_pahari
ENSCPOG00000013194	RBM4	100	99.301	MGP_PahariEiJ_G0014013	-	100	99.301	Mus_pahari
ENSCPOG00000013194	RBM4	97	99.275	MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	Mus_pahari
ENSCPOG00000013194	RBM4	100	79.878	MGP_SPRETEiJ_G0023430	-	100	79.878	Mus_spretus
ENSCPOG00000013194	RBM4	100	79.878	MGP_SPRETEiJ_G0023428	-	94	79.878	Mus_spretus
ENSCPOG00000013194	RBM4	100	73.611	MGP_SPRETEiJ_G0023429	-	100	74.306	Mus_spretus
ENSCPOG00000013194	RBM4	97	99.275	ENSMPUG00000003450	RBM4B	100	87.945	Mustela_putorius_furo
ENSCPOG00000013194	RBM4	100	99.452	ENSMPUG00000003443	RBM4	100	99.452	Mustela_putorius_furo
ENSCPOG00000013194	RBM4	97	99.275	ENSMLUG00000001290	RBM4B	100	85.479	Myotis_lucifugus
ENSCPOG00000013194	RBM4	97	98.551	ENSMLUG00000004076	RBM4	95	96.419	Myotis_lucifugus
ENSCPOG00000013194	RBM4	97	99.275	ENSNGAG00000016292	Rbm4b	100	85.753	Nannospalax_galili
ENSCPOG00000013194	RBM4	100	99.301	ENSNLEG00000035021	RBM4	100	99.301	Nomascus_leucogenys
ENSCPOG00000013194	RBM4	100	96.503	ENSNLEG00000006213	RBM4B	97	99.275	Nomascus_leucogenys
ENSCPOG00000013194	RBM4	97	98.551	ENSMEUG00000001445	-	100	89.041	Notamacropus_eugenii
ENSCPOG00000013194	RBM4	62	87.225	ENSMEUG00000005739	-	100	87.225	Notamacropus_eugenii
ENSCPOG00000013194	RBM4	97	99.275	ENSOPRG00000009158	RBM4B	100	87.671	Ochotona_princeps
ENSCPOG00000013194	RBM4	100	98.356	ENSOPRG00000009149	RBM4	100	98.356	Ochotona_princeps
ENSCPOG00000013194	RBM4	96	87.591	ENSODEG00000001866	-	100	80.000	Octodon_degus
ENSCPOG00000013194	RBM4	100	97.902	ENSODEG00000020039	-	100	97.902	Octodon_degus
ENSCPOG00000013194	RBM4	100	96.503	ENSODEG00000019143	-	100	96.503	Octodon_degus
ENSCPOG00000013194	RBM4	100	77.622	ENSODEG00000006635	-	100	77.622	Octodon_degus
ENSCPOG00000013194	RBM4	97	100.000	ENSODEG00000017696	-	100	87.397	Octodon_degus
ENSCPOG00000013194	RBM4	97	99.275	ENSOANG00000003143	-	84	78.356	Ornithorhynchus_anatinus
ENSCPOG00000013194	RBM4	97	99.275	ENSOANG00000011036	-	100	84.658	Ornithorhynchus_anatinus
ENSCPOG00000013194	RBM4	100	99.452	ENSOCUG00000004731	RBM4	100	99.452	Oryctolagus_cuniculus
ENSCPOG00000013194	RBM4	97	99.275	ENSOCUG00000006695	LARK	100	87.397	Oryctolagus_cuniculus
ENSCPOG00000013194	RBM4	97	99.275	ENSOGAG00000015648	RBM4B	100	87.397	Otolemur_garnettii
ENSCPOG00000013194	RBM4	100	98.904	ENSOGAG00000015647	RBM4	100	98.904	Otolemur_garnettii
ENSCPOG00000013194	RBM4	97	99.275	ENSOARG00000007759	RBM4B	100	88.219	Ovis_aries
ENSCPOG00000013194	RBM4	97	99.275	ENSOARG00000007700	RBM4	100	93.973	Ovis_aries
ENSCPOG00000013194	RBM4	100	96.503	ENSPPAG00000015125	RBM4B	97	99.275	Pan_paniscus
ENSCPOG00000013194	RBM4	100	99.301	ENSPPRG00000003533	RBM4	100	99.301	Panthera_pardus
ENSCPOG00000013194	RBM4	97	99.275	ENSPPRG00000003388	RBM4B	97	99.275	Panthera_pardus
ENSCPOG00000013194	RBM4	100	100.000	ENSPTIG00000016180	RBM4	100	100.000	Panthera_tigris_altaica
ENSCPOG00000013194	RBM4	97	99.275	ENSPTIG00000015426	RBM4B	97	99.275	Panthera_tigris_altaica
ENSCPOG00000013194	RBM4	100	96.503	ENSPTRG00000003935	RBM4B	97	99.275	Pan_troglodytes
ENSCPOG00000013194	RBM4	97	99.275	ENSPANG00000020672	RBM4B	97	99.275	Papio_anubis
ENSCPOG00000013194	RBM4	97	96.377	ENSPSIG00000003477	-	95	77.397	Pelodiscus_sinensis
ENSCPOG00000013194	RBM4	97	96.377	ENSPSIG00000003430	-	100	73.670	Pelodiscus_sinensis
ENSCPOG00000013194	RBM4	97	99.275	ENSPEMG00000009144	Rbm4b	100	86.027	Peromyscus_maniculatus_bairdii
ENSCPOG00000013194	RBM4	100	97.808	ENSPPYG00000003012	RBM4	100	97.808	Pongo_abelii
ENSCPOG00000013194	RBM4	97	99.275	ENSPPYG00000003010	RBM4B	100	87.123	Pongo_abelii
ENSCPOG00000013194	RBM4	100	96.986	ENSPCAG00000003393	-	100	96.986	Procavia_capensis
ENSCPOG00000013194	RBM4	97	99.275	ENSPCOG00000027885	RBM4B	97	99.275	Propithecus_coquereli
ENSCPOG00000013194	RBM4	100	98.904	ENSPVAG00000010486	RBM4	100	98.904	Pteropus_vampyrus
ENSCPOG00000013194	RBM4	97	99.275	ENSPVAG00000010487	RBM4B	100	87.671	Pteropus_vampyrus
ENSCPOG00000013194	RBM4	100	99.301	ENSRNOG00000050741	Rbm4	100	99.301	Rattus_norvegicus
ENSCPOG00000013194	RBM4	97	99.275	ENSRNOG00000061795	Rbm4b	100	86.027	Rattus_norvegicus
ENSCPOG00000013194	RBM4	97	99.275	ENSRBIG00000019394	RBM4B	97	99.275	Rhinopithecus_bieti
ENSCPOG00000013194	RBM4	97	99.275	ENSRROG00000032850	RBM4B	97	99.275	Rhinopithecus_roxellana
ENSCPOG00000013194	RBM4	97	99.275	ENSRROG00000032796	-	90	99.296	Rhinopithecus_roxellana
ENSCPOG00000013194	RBM4	97	98.551	ENSSBOG00000034474	RBM4B	97	98.551	Saimiri_boliviensis_boliviensis
ENSCPOG00000013194	RBM4	97	99.275	ENSSHAG00000008386	-	100	87.397	Sarcophilus_harrisii
ENSCPOG00000013194	RBM4	97	99.275	ENSSARG00000010710	RBM4B	100	87.671	Sorex_araneus
ENSCPOG00000013194	RBM4	100	99.178	ENSSSCG00000032437	RBM4	100	99.178	Sus_scrofa
ENSCPOG00000013194	RBM4	97	97.101	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSCPOG00000013194	RBM4	96	99.200	ENSTBEG00000003727	-	70	99.545	Tupaia_belangeri
ENSCPOG00000013194	RBM4	97	99.275	ENSTBEG00000003748	RBM4B	100	85.753	Tupaia_belangeri
ENSCPOG00000013194	RBM4	97	98.551	ENSTTRG00000011166	RBM4B	100	87.397	Tursiops_truncatus
ENSCPOG00000013194	RBM4	100	97.808	ENSTTRG00000011164	RBM4	100	97.808	Tursiops_truncatus
ENSCPOG00000013194	RBM4	100	99.301	ENSUAMG00000014882	RBM4	100	99.301	Ursus_americanus
ENSCPOG00000013194	RBM4	97	99.275	ENSUAMG00000004745	RBM4B	100	87.945	Ursus_americanus
ENSCPOG00000013194	RBM4	100	98.601	ENSUMAG00000011738	-	100	98.601	Ursus_maritimus
ENSCPOG00000013194	RBM4	100	96.712	ENSVPAG00000001949	RBM4	100	96.712	Vicugna_pacos
ENSCPOG00000013194	RBM4	97	98.551	ENSVPAG00000001950	RBM4B	100	87.397	Vicugna_pacos
ENSCPOG00000013194	RBM4	99	88.652	ENSVVUG00000011717	-	96	88.652	Vulpes_vulpes
ENSCPOG00000013194	RBM4	100	98.630	ENSVVUG00000010622	RBM4	100	98.630	Vulpes_vulpes
ENSCPOG00000013194	RBM4	97	99.275	ENSVVUG00000010619	RBM4B	100	87.397	Vulpes_vulpes