EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000013535 (Gene tree)
Gene ID: 100716546
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6842 bases
Position: chrDS562882.1:3858150-3864991
Accession: 100716546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012187	TruB_N	PF01509.18	1.2e-28	1	1
ENSCPOP00000026559	TruB_N	PF01509.18	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000032278	TRUB2-202	585	-	ENSCPOP00000026559	194 (aa)	-	A0A286XMN4
ENSCPOT00000013670	TRUB2-201	999	XM_003470604	ENSCPOP00000012187	333 (aa)	XP_003470652	H0VNY6

Gene Model

Click here to download ENSCPOG00000013535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013535	TRUB2	98	81.538	ENSG00000167112	TRUB2	98	81.538	Homo_sapiens
ENSCPOG00000013535	TRUB2	85	43.056	ENSAPOG00000018284	-	80	61.069	Acanthochromis_polyacanthus
ENSCPOG00000013535	TRUB2	62	57.561	ENSAPOG00000015733	trub2	74	57.561	Acanthochromis_polyacanthus
ENSCPOG00000013535	TRUB2	99	80.303	ENSAMEG00000015395	TRUB2	99	80.303	Ailuropoda_melanoleuca
ENSCPOG00000013535	TRUB2	92	49.451	ENSACIG00000016500	trub2	87	53.819	Amphilophus_citrinellus
ENSCPOG00000013535	TRUB2	92	51.648	ENSAOCG00000002330	trub2	84	55.903	Amphiprion_ocellaris
ENSCPOG00000013535	TRUB2	88	54.070	ENSAPEG00000013177	trub2	82	57.554	Amphiprion_percula
ENSCPOG00000013535	TRUB2	88	52.907	ENSATEG00000011371	trub2	88	55.357	Anabas_testudineus
ENSCPOG00000013535	TRUB2	86	58.844	ENSAPLG00000009254	TRUB2	94	59.524	Anas_platyrhynchos
ENSCPOG00000013535	TRUB2	88	65.753	ENSACAG00000007331	TRUB2	89	65.753	Anolis_carolinensis
ENSCPOG00000013535	TRUB2	92	83.708	ENSANAG00000036234	TRUB2	99	82.581	Aotus_nancymaae
ENSCPOG00000013535	TRUB2	91	51.381	ENSACLG00000010793	trub2	87	54.861	Astatotilapia_calliptera
ENSCPOG00000013535	TRUB2	95	51.420	ENSAMXG00000031679	trub2	90	51.420	Astyanax_mexicanus
ENSCPOG00000013535	TRUB2	85	81.707	ENSBTAG00000004663	TRUB2	100	81.707	Bos_taurus
ENSCPOG00000013535	TRUB2	51	80.702	ENSBTAG00000055269	-	77	80.702	Bos_taurus
ENSCPOG00000013535	TRUB2	98	80.308	ENSCJAG00000020009	TRUB2	98	80.308	Callithrix_jacchus
ENSCPOG00000013535	TRUB2	99	78.852	ENSCAFG00000020068	TRUB2	100	78.852	Canis_familiaris
ENSCPOG00000013535	TRUB2	92	81.461	ENSCAFG00020017325	-	100	82.022	Canis_lupus_dingo
ENSCPOG00000013535	TRUB2	97	81.115	ENSCHIG00000021160	TRUB2	98	81.115	Capra_hircus
ENSCPOG00000013535	TRUB2	98	81.846	ENSTSYG00000034163	TRUB2	98	81.846	Carlito_syrichta
ENSCPOG00000013535	TRUB2	89	99.662	ENSCAPG00000000223	TRUB2	100	100.000	Cavia_aperea
ENSCPOG00000013535	TRUB2	96	79.624	ENSCCAG00000026531	-	98	79.624	Cebus_capucinus
ENSCPOG00000013535	TRUB2	96	77.743	ENSCCAG00000028463	-	96	77.044	Cebus_capucinus
ENSCPOG00000013535	TRUB2	98	81.538	ENSCATG00000038234	TRUB2	98	81.538	Cercocebus_atys
ENSCPOG00000013535	TRUB2	100	91.753	ENSCLAG00000001702	TRUB2	99	89.264	Chinchilla_lanigera
ENSCPOG00000013535	TRUB2	97	77.231	ENSCSAG00000014117	TRUB2	98	77.231	Chlorocebus_sabaeus
ENSCPOG00000013535	TRUB2	99	81.571	ENSCHOG00000001555	TRUB2	100	81.571	Choloepus_hoffmanni
ENSCPOG00000013535	TRUB2	91	62.147	ENSCPBG00000025186	TRUB2	87	63.636	Chrysemys_picta_bellii
ENSCPOG00000013535	TRUB2	87	36.994	ENSCSAVG00000003930	-	90	35.034	Ciona_savignyi
ENSCPOG00000013535	TRUB2	98	74.462	ENSCANG00000016135	TRUB2	98	74.462	Colobus_angolensis_palliatus
ENSCPOG00000013535	TRUB2	97	80.495	ENSCGRG00001024441	Trub2	96	84.270	Cricetulus_griseus_chok1gshd
ENSCPOG00000013535	TRUB2	97	80.495	ENSCGRG00000005633	Trub2	98	80.495	Cricetulus_griseus_crigri
ENSCPOG00000013535	TRUB2	91	49.724	ENSCSEG00000001331	trub2	86	52.431	Cynoglossus_semilaevis
ENSCPOG00000013535	TRUB2	91	52.778	ENSCVAG00000009901	trub2	86	55.556	Cyprinodon_variegatus
ENSCPOG00000013535	TRUB2	88	54.386	ENSDARG00000028379	trub2	79	54.676	Danio_rerio
ENSCPOG00000013535	TRUB2	98	79.692	ENSDNOG00000045679	-	98	79.692	Dasypus_novemcinctus
ENSCPOG00000013535	TRUB2	97	56.966	ENSDNOG00000043967	-	96	56.966	Dasypus_novemcinctus
ENSCPOG00000013535	TRUB2	98	80.243	ENSDORG00000016222	Trub2	98	83.548	Dipodomys_ordii
ENSCPOG00000013535	TRUB2	87	32.226	FBgn0033060	CG7849	94	32.226	Drosophila_melanogaster
ENSCPOG00000013535	TRUB2	99	76.667	ENSETEG00000009114	TRUB2	100	76.667	Echinops_telfairi
ENSCPOG00000013535	TRUB2	83	37.931	ENSEBUG00000015723	trub2	84	47.561	Eptatretus_burgeri
ENSCPOG00000013535	TRUB2	99	80.665	ENSEASG00005016819	TRUB2	100	80.665	Equus_asinus_asinus
ENSCPOG00000013535	TRUB2	99	81.269	ENSECAG00000023520	TRUB2	100	81.269	Equus_caballus
ENSCPOG00000013535	TRUB2	91	85.311	ENSEEUG00000008908	TRUB2	94	82.848	Erinaceus_europaeus
ENSCPOG00000013535	TRUB2	88	52.717	ENSELUG00000002376	trub2	91	54.983	Esox_lucius
ENSCPOG00000013535	TRUB2	95	80.757	ENSFCAG00000005839	TRUB2	98	80.757	Felis_catus
ENSCPOG00000013535	TRUB2	79	64.394	ENSFALG00000001364	TRUB2	85	65.152	Ficedula_albicollis
ENSCPOG00000013535	TRUB2	100	89.691	ENSFDAG00000021374	TRUB2	99	86.280	Fukomys_damarensis
ENSCPOG00000013535	TRUB2	85	50.694	ENSFHEG00000014655	trub2	85	50.694	Fundulus_heteroclitus
ENSCPOG00000013535	TRUB2	83	47.101	ENSGMOG00000000981	trub2	92	47.101	Gadus_morhua
ENSCPOG00000013535	TRUB2	86	61.806	ENSGALG00000004920	TRUB2	71	61.806	Gallus_gallus
ENSCPOG00000013535	TRUB2	87	53.529	ENSGAFG00000010107	trub2	84	55.477	Gambusia_affinis
ENSCPOG00000013535	TRUB2	95	51.402	ENSGACG00000001476	trub2	95	51.402	Gasterosteus_aculeatus
ENSCPOG00000013535	TRUB2	88	64.706	ENSGAGG00000022872	TRUB2	86	65.517	Gopherus_agassizii
ENSCPOG00000013535	TRUB2	98	82.154	ENSGGOG00000014780	TRUB2	98	82.154	Gorilla_gorilla
ENSCPOG00000013535	TRUB2	91	51.381	ENSHBUG00000022384	trub2	87	55.556	Haplochromis_burtoni
ENSCPOG00000013535	TRUB2	99	85.152	ENSHGLG00000016715	TRUB2	99	85.152	Heterocephalus_glaber_female
ENSCPOG00000013535	TRUB2	99	85.152	ENSHGLG00100016548	TRUB2	99	85.152	Heterocephalus_glaber_male
ENSCPOG00000013535	TRUB2	96	50.777	ENSHCOG00000017748	trub2	88	55.556	Hippocampus_comes
ENSCPOG00000013535	TRUB2	88	53.584	ENSIPUG00000017725	hdhd3	51	53.584	Ictalurus_punctatus
ENSCPOG00000013535	TRUB2	99	80.060	ENSSTOG00000008024	-	100	80.060	Ictidomys_tridecemlineatus
ENSCPOG00000013535	TRUB2	98	80.734	ENSSTOG00000022617	-	99	80.734	Ictidomys_tridecemlineatus
ENSCPOG00000013535	TRUB2	97	74.303	ENSJJAG00000019181	Trub2	97	74.303	Jaculus_jaculus
ENSCPOG00000013535	TRUB2	91	51.111	ENSKMAG00000007861	trub2	86	53.659	Kryptolebias_marmoratus
ENSCPOG00000013535	TRUB2	93	50.000	ENSLBEG00000000907	trub2	92	50.000	Labrus_bergylta
ENSCPOG00000013535	TRUB2	87	62.722	ENSLACG00000001515	TRUB2	85	62.937	Latimeria_chalumnae
ENSCPOG00000013535	TRUB2	87	58.721	ENSLOCG00000000885	trub2	95	58.419	Lepisosteus_oculatus
ENSCPOG00000013535	TRUB2	92	85.393	ENSLAFG00000002174	TRUB2	99	84.667	Loxodonta_africana
ENSCPOG00000013535	TRUB2	97	81.115	ENSMFAG00000000881	TRUB2	98	81.115	Macaca_fascicularis
ENSCPOG00000013535	TRUB2	97	81.115	ENSMMUG00000014146	TRUB2	98	81.115	Macaca_mulatta
ENSCPOG00000013535	TRUB2	92	85.955	ENSMNEG00000011189	TRUB2	98	80.805	Macaca_nemestrina
ENSCPOG00000013535	TRUB2	97	81.481	ENSMLEG00000037270	TRUB2	98	81.481	Mandrillus_leucophaeus
ENSCPOG00000013535	TRUB2	92	51.648	ENSMAMG00000023643	trub2	95	55.208	Mastacembelus_armatus
ENSCPOG00000013535	TRUB2	91	51.381	ENSMZEG00005016018	trub2	87	55.208	Maylandia_zebra
ENSCPOG00000013535	TRUB2	60	65.829	ENSMGAG00000003894	TRUB2	99	65.829	Meleagris_gallopavo
ENSCPOG00000013535	TRUB2	100	85.567	ENSMAUG00000010403	Trub2	99	80.729	Mesocricetus_auratus
ENSCPOG00000013535	TRUB2	98	80.000	ENSMICG00000047032	TRUB2	98	80.000	Microcebus_murinus
ENSCPOG00000013535	TRUB2	92	86.034	ENSMOCG00000014291	Trub2	99	86.288	Microtus_ochrogaster
ENSCPOG00000013535	TRUB2	92	54.645	ENSMMOG00000021674	trub2	93	54.516	Mola_mola
ENSCPOG00000013535	TRUB2	90	71.839	ENSMODG00000005940	TRUB2	99	72.945	Monodelphis_domestica
ENSCPOG00000013535	TRUB2	92	53.226	ENSMALG00000021231	trub2	86	56.849	Monopterus_albus
ENSCPOG00000013535	TRUB2	99	80.060	MGP_CAROLIEiJ_G0023368	Trub2	100	80.060	Mus_caroli
ENSCPOG00000013535	TRUB2	99	80.665	ENSMUSG00000039826	Trub2	100	80.665	Mus_musculus
ENSCPOG00000013535	TRUB2	100	84.536	MGP_PahariEiJ_G0024826	Trub2	100	80.060	Mus_pahari
ENSCPOG00000013535	TRUB2	100	85.052	MGP_SPRETEiJ_G0024286	Trub2	100	80.967	Mus_spretus
ENSCPOG00000013535	TRUB2	99	77.341	ENSMPUG00000013206	TRUB2	91	77.341	Mustela_putorius_furo
ENSCPOG00000013535	TRUB2	93	83.601	ENSMLUG00000005256	TRUB2	94	83.601	Myotis_lucifugus
ENSCPOG00000013535	TRUB2	97	81.115	ENSNGAG00000018679	Trub2	98	81.115	Nannospalax_galili
ENSCPOG00000013535	TRUB2	91	52.198	ENSNBRG00000016294	trub2	87	55.363	Neolamprologus_brichardi
ENSCPOG00000013535	TRUB2	98	81.231	ENSNLEG00000017556	TRUB2	98	81.231	Nomascus_leucogenys
ENSCPOG00000013535	TRUB2	92	72.472	ENSMEUG00000000484	TRUB2	95	74.324	Notamacropus_eugenii
ENSCPOG00000013535	TRUB2	97	79.503	ENSOPRG00000001981	TRUB2	98	79.503	Ochotona_princeps
ENSCPOG00000013535	TRUB2	100	88.660	ENSODEG00000017292	TRUB2	99	87.385	Octodon_degus
ENSCPOG00000013535	TRUB2	91	51.381	ENSONIG00000004230	trub2	87	54.861	Oreochromis_niloticus
ENSCPOG00000013535	TRUB2	73	79.577	ENSOANG00000029023	-	83	79.144	Ornithorhynchus_anatinus
ENSCPOG00000013535	TRUB2	97	81.677	ENSOCUG00000026296	TRUB2	89	81.790	Oryctolagus_cuniculus
ENSCPOG00000013535	TRUB2	89	53.020	ENSORLG00000020011	trub2	89	53.020	Oryzias_latipes
ENSCPOG00000013535	TRUB2	89	53.199	ENSORLG00020011028	trub2	86	53.199	Oryzias_latipes_hni
ENSCPOG00000013535	TRUB2	89	53.199	ENSORLG00015007494	trub2	90	53.199	Oryzias_latipes_hsok
ENSCPOG00000013535	TRUB2	88	55.233	ENSOMEG00000006702	trub2	84	57.554	Oryzias_melastigma
ENSCPOG00000013535	TRUB2	80	82.692	ENSOGAG00000003511	-	95	82.692	Otolemur_garnettii
ENSCPOG00000013535	TRUB2	73	78.689	ENSOARG00000003785	-	97	78.689	Ovis_aries
ENSCPOG00000013535	TRUB2	97	81.115	ENSOARG00000010579	-	98	81.115	Ovis_aries
ENSCPOG00000013535	TRUB2	98	82.154	ENSPPAG00000043146	TRUB2	98	82.154	Pan_paniscus
ENSCPOG00000013535	TRUB2	95	80.757	ENSPPRG00000006307	TRUB2	98	80.757	Panthera_pardus
ENSCPOG00000013535	TRUB2	95	80.442	ENSPTIG00000012366	TRUB2	98	80.442	Panthera_tigris_altaica
ENSCPOG00000013535	TRUB2	98	82.154	ENSPTRG00000021423	TRUB2	98	82.154	Pan_troglodytes
ENSCPOG00000013535	TRUB2	98	82.154	ENSPTRG00000052151	-	98	82.154	Pan_troglodytes
ENSCPOG00000013535	TRUB2	97	81.790	ENSPANG00000025856	TRUB2	98	81.790	Papio_anubis
ENSCPOG00000013535	TRUB2	91	52.486	ENSPKIG00000019769	trub2	95	53.103	Paramormyrops_kingsleyae
ENSCPOG00000013535	TRUB2	87	60.959	ENSPSIG00000015701	TRUB2	97	60.959	Pelodiscus_sinensis
ENSCPOG00000013535	TRUB2	92	49.171	ENSPMGG00000010206	trub2	90	52.265	Periophthalmus_magnuspinnatus
ENSCPOG00000013535	TRUB2	98	81.902	ENSPEMG00000017893	Trub2	96	86.111	Peromyscus_maniculatus_bairdii
ENSCPOG00000013535	TRUB2	92	73.596	ENSPCIG00000026731	TRUB2	95	75.338	Phascolarctos_cinereus
ENSCPOG00000013535	TRUB2	87	52.941	ENSPFOG00000018018	trub2	75	54.417	Poecilia_formosa
ENSCPOG00000013535	TRUB2	87	52.941	ENSPLAG00000010484	trub2	81	54.417	Poecilia_latipinna
ENSCPOG00000013535	TRUB2	92	52.427	ENSPMEG00000012913	trub2	91	52.427	Poecilia_mexicana
ENSCPOG00000013535	TRUB2	91	50.556	ENSPREG00000002549	trub2	93	50.625	Poecilia_reticulata
ENSCPOG00000013535	TRUB2	98	81.231	ENSPPYG00000019650	TRUB2	99	81.231	Pongo_abelii
ENSCPOG00000013535	TRUB2	99	80.967	ENSPCAG00000015068	TRUB2	100	80.967	Procavia_capensis
ENSCPOG00000013535	TRUB2	98	82.462	ENSPCOG00000017100	TRUB2	98	82.462	Propithecus_coquereli
ENSCPOG00000013535	TRUB2	89	82.215	ENSPVAG00000001224	TRUB2	100	82.215	Pteropus_vampyrus
ENSCPOG00000013535	TRUB2	91	51.381	ENSPNYG00000013666	trub2	87	55.208	Pundamilia_nyererei
ENSCPOG00000013535	TRUB2	93	51.447	ENSPNAG00000017292	trub2	89	51.447	Pygocentrus_nattereri
ENSCPOG00000013535	TRUB2	95	79.811	ENSRNOG00000043189	Trub2	98	79.811	Rattus_norvegicus
ENSCPOG00000013535	TRUB2	98	75.385	ENSRBIG00000006965	TRUB2	98	75.385	Rhinopithecus_bieti
ENSCPOG00000013535	TRUB2	98	83.077	ENSRROG00000042928	TRUB2	98	83.077	Rhinopithecus_roxellana
ENSCPOG00000013535	TRUB2	98	80.615	ENSSBOG00000022439	TRUB2	98	80.615	Saimiri_boliviensis_boliviensis
ENSCPOG00000013535	TRUB2	91	51.934	ENSSFOG00015013391	trub2	93	54.483	Scleropages_formosus
ENSCPOG00000013535	TRUB2	92	52.747	ENSSMAG00000020820	trub2	88	55.556	Scophthalmus_maximus
ENSCPOG00000013535	TRUB2	88	52.326	ENSSDUG00000016928	trub2	83	55.755	Seriola_dumerili
ENSCPOG00000013535	TRUB2	88	52.907	ENSSLDG00000024701	trub2	83	56.115	Seriola_lalandi_dorsalis
ENSCPOG00000013535	TRUB2	88	63.356	ENSSPUG00000015515	TRUB2	87	63.356	Sphenodon_punctatus
ENSCPOG00000013535	TRUB2	91	53.846	ENSSPAG00000017865	trub2	87	56.552	Stegastes_partitus
ENSCPOG00000013535	TRUB2	97	81.173	ENSSSCG00000005645	TRUB2	97	80.556	Sus_scrofa
ENSCPOG00000013535	TRUB2	78	65.134	ENSTGUG00000003704	TRUB2	99	65.134	Taeniopygia_guttata
ENSCPOG00000013535	TRUB2	96	45.078	ENSTRUG00000015499	trub2	88	51.736	Takifugu_rubripes
ENSCPOG00000013535	TRUB2	92	50.000	ENSTNIG00000014721	trub2	98	53.633	Tetraodon_nigroviridis
ENSCPOG00000013535	TRUB2	66	76.712	ENSTBEG00000000586	TRUB2	97	76.712	Tupaia_belangeri
ENSCPOG00000013535	TRUB2	92	83.708	ENSTTRG00000016486	TRUB2	98	77.538	Tursiops_truncatus
ENSCPOG00000013535	TRUB2	99	80.606	ENSUAMG00000020276	TRUB2	96	80.606	Ursus_americanus
ENSCPOG00000013535	TRUB2	99	80.606	ENSUMAG00000022051	TRUB2	96	80.606	Ursus_maritimus
ENSCPOG00000013535	TRUB2	91	74.011	ENSVPAG00000005793	TRUB2	99	64.557	Vicugna_pacos
ENSCPOG00000013535	TRUB2	92	82.022	ENSVVUG00000013451	TRUB2	89	80.707	Vulpes_vulpes
ENSCPOG00000013535	TRUB2	95	58.044	ENSXETG00000003973	trub2	98	58.044	Xenopus_tropicalis
ENSCPOG00000013535	TRUB2	91	52.222	ENSXCOG00000008759	trub2	86	54.861	Xiphophorus_couchianus
ENSCPOG00000013535	TRUB2	91	51.667	ENSXMAG00000015478	trub2	86	54.514	Xiphophorus_maculatus