EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000013710 (Gene tree)
Gene ID: 100713536
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 4104 bases
Position: chrDS562931.1:6281796-6285899
Accession: 100713536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012347	RRM_1	PF00076.22	8.5e-14	1	1
ENSCPOP00000026783	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000030994	ALYREF-201	1697	XM_003464901	ENSCPOP00000026783	256 (aa)	XP_003464949	A0A286XMT3
ENSCPOT00000013849	ALYREF-202	669	-	ENSCPOP00000012347	222 (aa)	-	H0VPC7

Gene Model

Click here to download ENSCPOG00000013710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013710	ALYREF	100	96.887	ENSG00000183684	ALYREF	97	96.887	Homo_sapiens
ENSCPOG00000013710	ALYREF	100	67.986	ENSAPOG00000018455	ALYREF	100	71.583	Acanthochromis_polyacanthus
ENSCPOG00000013710	ALYREF	73	94.624	ENSAMEG00000017463	ALYREF	74	95.628	Ailuropoda_melanoleuca
ENSCPOG00000013710	ALYREF	100	74.713	ENSACAG00000010526	ALYREF	100	73.828	Anolis_carolinensis
ENSCPOG00000013710	ALYREF	100	83.333	ENSANAG00000028229	-	78	82.812	Aotus_nancymaae
ENSCPOG00000013710	ALYREF	76	93.491	ENSANAG00000022638	-	75	94.350	Aotus_nancymaae
ENSCPOG00000013710	ALYREF	100	98.054	ENSBTAG00000008498	ALYREF	100	98.054	Bos_taurus
ENSCPOG00000013710	ALYREF	100	96.498	ENSCJAG00000039942	ALYREF	97	96.498	Callithrix_jacchus
ENSCPOG00000013710	ALYREF	100	97.276	ENSCAFG00000005877	ALYREF	100	97.276	Canis_familiaris
ENSCPOG00000013710	ALYREF	100	97.276	ENSCAFG00020009815	ALYREF	100	97.276	Canis_lupus_dingo
ENSCPOG00000013710	ALYREF	100	97.287	ENSCHIG00000017396	ALYREF	97	97.287	Capra_hircus
ENSCPOG00000013710	ALYREF	79	94.886	ENSTSYG00000002272	ALYREF	74	94.886	Carlito_syrichta
ENSCPOG00000013710	ALYREF	52	100.000	ENSCAPG00000014727	-	100	100.000	Cavia_aperea
ENSCPOG00000013710	ALYREF	100	96.498	ENSCCAG00000020578	-	97	96.498	Cebus_capucinus
ENSCPOG00000013710	ALYREF	100	86.937	ENSCCAG00000030237	-	100	84.234	Cebus_capucinus
ENSCPOG00000013710	ALYREF	100	96.887	ENSCATG00000033169	ALYREF	97	96.887	Cercocebus_atys
ENSCPOG00000013710	ALYREF	100	89.883	ENSCLAG00000015026	ALYREF	100	89.883	Chinchilla_lanigera
ENSCPOG00000013710	ALYREF	100	96.887	ENSCSAG00000002216	ALYREF	97	96.887	Chlorocebus_sabaeus
ENSCPOG00000013710	ALYREF	78	91.573	ENSCANG00000034056	ALYREF	95	88.764	Colobus_angolensis_palliatus
ENSCPOG00000013710	ALYREF	100	94.922	ENSCGRG00001018191	-	100	94.922	Cricetulus_griseus_chok1gshd
ENSCPOG00000013710	ALYREF	82	85.263	ENSCGRG00000015871	-	94	85.638	Cricetulus_griseus_crigri
ENSCPOG00000013710	ALYREF	71	57.068	ENSCSEG00000015438	-	96	58.564	Cynoglossus_semilaevis
ENSCPOG00000013710	ALYREF	76	87.079	ENSDNOG00000002563	ALYREF	79	91.979	Dasypus_novemcinctus
ENSCPOG00000013710	ALYREF	90	80.660	ENSDORG00000025849	-	73	95.556	Dipodomys_ordii
ENSCPOG00000013710	ALYREF	76	92.614	ENSETEG00000016596	ALYREF	100	93.220	Echinops_telfairi
ENSCPOG00000013710	ALYREF	100	97.665	ENSEASG00005005824	ALYREF	95	97.665	Equus_asinus_asinus
ENSCPOG00000013710	ALYREF	100	97.665	ENSECAG00000018754	ALYREF	95	97.665	Equus_caballus
ENSCPOG00000013710	ALYREF	67	95.930	ENSEEUG00000010164	ALYREF	100	94.767	Erinaceus_europaeus
ENSCPOG00000013710	ALYREF	100	97.665	ENSFCAG00000022549	ALYREF	98	97.665	Felis_catus
ENSCPOG00000013710	ALYREF	88	88.776	ENSFDAG00000001213	ALYREF	93	86.893	Fukomys_damarensis
ENSCPOG00000013710	ALYREF	100	84.170	ENSGALG00000007237	ALYREF	100	83.784	Gallus_gallus
ENSCPOG00000013710	ALYREF	100	70.943	ENSGACG00000013328	ALYREF	100	72.075	Gasterosteus_aculeatus
ENSCPOG00000013710	ALYREF	100	80.916	ENSGAGG00000008536	ALYREF	100	82.061	Gopherus_agassizii
ENSCPOG00000013710	ALYREF	100	97.276	ENSGGOG00000013935	ALYREF	99	96.512	Gorilla_gorilla
ENSCPOG00000013710	ALYREF	100	93.774	ENSHGLG00000008293	ALYREF	100	96.396	Heterocephalus_glaber_female
ENSCPOG00000013710	ALYREF	89	76.000	ENSHGLG00100006949	ALYREF	85	88.500	Heterocephalus_glaber_male
ENSCPOG00000013710	ALYREF	100	67.416	ENSHCOG00000015046	ALYREF	100	69.485	Hippocampus_comes
ENSCPOG00000013710	ALYREF	100	96.094	ENSJJAG00000004134	-	100	96.094	Jaculus_jaculus
ENSCPOG00000013710	ALYREF	100	70.833	ENSLACG00000005694	ALYREF	100	71.970	Latimeria_chalumnae
ENSCPOG00000013710	ALYREF	81	89.840	ENSLAFG00000003083	ALYREF	100	96.791	Loxodonta_africana
ENSCPOG00000013710	ALYREF	100	94.553	ENSMFAG00000001394	ALYREF	97	94.553	Macaca_fascicularis
ENSCPOG00000013710	ALYREF	100	96.887	ENSMMUG00000012884	ALYREF	97	96.887	Macaca_mulatta
ENSCPOG00000013710	ALYREF	100	96.887	ENSMNEG00000043666	ALYREF	97	96.887	Macaca_nemestrina
ENSCPOG00000013710	ALYREF	80	91.160	ENSMLEG00000043353	ALYREF	87	88.398	Mandrillus_leucophaeus
ENSCPOG00000013710	ALYREF	100	85.135	ENSMAUG00000020552	-	100	85.135	Mesocricetus_auratus
ENSCPOG00000013710	ALYREF	100	97.656	ENSMICG00000017403	ALYREF	97	97.656	Microcebus_murinus
ENSCPOG00000013710	ALYREF	100	87.387	ENSMOCG00000016792	-	100	88.739	Microtus_ochrogaster
ENSCPOG00000013710	ALYREF	99	90.661	ENSMODG00000003030	ALYREF	84	92.996	Monodelphis_domestica
ENSCPOG00000013710	ALYREF	100	69.203	ENSMALG00000019408	ALYREF	100	69.818	Monopterus_albus
ENSCPOG00000013710	ALYREF	100	97.656	MGP_CAROLIEiJ_G0017529	Alyref	100	97.656	Mus_caroli
ENSCPOG00000013710	ALYREF	100	86.404	MGP_CAROLIEiJ_G0014874	Alyref2	100	85.965	Mus_caroli
ENSCPOG00000013710	ALYREF	100	97.656	ENSMUSG00000025134	Alyref	100	97.656	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.519	ENSMUSG00000094314	Gm4301	62	69.945	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.519	ENSMUSG00000096640	Gm4312	62	69.945	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.837	ENSMUSG00000112931	Gm4303	62	71.038	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000091779	Gm21293	100	56.767	Mus_musculus
ENSCPOG00000013710	ALYREF	100	65.992	ENSMUSG00000086727	4931428L18Rik	100	61.742	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000097427	Gm6763	98	69.595	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.837	ENSMUSG00000112856	Gm4305	62	71.038	Mus_musculus
ENSCPOG00000013710	ALYREF	100	88.789	ENSMUSG00000060244	Alyref2	100	88.341	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.981	ENSMUSG00000091101	Gm4302	61	71.038	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000094144	Gm21312	100	56.767	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000097878	Gm8764	98	69.595	Mus_musculus
ENSCPOG00000013710	ALYREF	100	63.333	ENSMUSG00000090854	Gm4340	100	55.926	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000097550	Gm21304	100	56.767	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.372	ENSMUSG00000117091	AC153137.1	100	61.364	Mus_musculus
ENSCPOG00000013710	ALYREF	90	68.837	ENSMUSG00000096744	Gm4307	62	71.038	Mus_musculus
ENSCPOG00000013710	ALYREF	100	64.286	ENSMUSG00000095022	Gm20765	100	56.767	Mus_musculus
ENSCPOG00000013710	ALYREF	100	97.656	MGP_PahariEiJ_G0018655	-	100	97.656	Mus_pahari
ENSCPOG00000013710	ALYREF	74	97.354	MGP_PahariEiJ_G0018656	-	99	97.354	Mus_pahari
ENSCPOG00000013710	ALYREF	83	73.575	MGP_PahariEiJ_G0027255	-	79	72.678	Mus_pahari
ENSCPOG00000013710	ALYREF	83	73.575	MGP_PahariEiJ_G0027254	-	81	72.678	Mus_pahari
ENSCPOG00000013710	ALYREF	76	57.080	MGP_SPRETEiJ_G0016590	-	54	76.230	Mus_spretus
ENSCPOG00000013710	ALYREF	100	88.341	MGP_SPRETEiJ_G0015679	Alyref2	100	87.892	Mus_spretus
ENSCPOG00000013710	ALYREF	100	97.656	MGP_SPRETEiJ_G0018373	Alyref	100	97.656	Mus_spretus
ENSCPOG00000013710	ALYREF	98	60.084	ENSMLUG00000022869	-	81	58.824	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	64.286	ENSMLUG00000030407	-	77	61.345	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	100	51.894	ENSMLUG00000023213	-	100	46.565	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	55.833	ENSMLUG00000015043	-	98	58.333	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	64.000	ENSMLUG00000026271	-	79	62.400	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	84	57.991	ENSMLUG00000028343	-	85	64.607	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	65.546	ENSMLUG00000025677	-	77	63.866	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	65.044	ENSMLUG00000024447	-	76	61.638	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	67.401	ENSMLUG00000027352	-	77	65.948	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	91	78.302	ENSMLUG00000009555	-	67	89.785	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	56.198	ENSMLUG00000024471	-	82	57.851	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	71.713	ENSMLUG00000027516	-	78	69.492	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	63.675	ENSMLUG00000024976	-	79	61.277	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	98	65.116	ENSMLUG00000002626	-	98	66.279	Myotis_lucifugus
ENSCPOG00000013710	ALYREF	100	97.276	ENSNLEG00000010313	ALYREF	97	97.276	Nomascus_leucogenys
ENSCPOG00000013710	ALYREF	91	65.714	ENSMEUG00000002210	ALYREF	92	72.857	Notamacropus_eugenii
ENSCPOG00000013710	ALYREF	52	93.233	ENSOPRG00000005551	-	52	93.233	Ochotona_princeps
ENSCPOG00000013710	ALYREF	100	97.692	ENSODEG00000008359	ALYREF	100	97.692	Octodon_degus
ENSCPOG00000013710	ALYREF	100	68.613	ENSORLG00000012331	ALYREF	100	71.168	Oryzias_latipes
ENSCPOG00000013710	ALYREF	83	89.119	ENSOGAG00000012409	ALYREF	83	89.119	Otolemur_garnettii
ENSCPOG00000013710	ALYREF	76	89.888	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSCPOG00000013710	ALYREF	100	97.665	ENSPPRG00000010829	ALYREF	98	97.665	Panthera_pardus
ENSCPOG00000013710	ALYREF	56	98.400	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSCPOG00000013710	ALYREF	100	97.276	ENSPTRG00000009774	ALYREF	97	97.276	Pan_troglodytes
ENSCPOG00000013710	ALYREF	100	96.887	ENSPANG00000019265	ALYREF	97	96.887	Papio_anubis
ENSCPOG00000013710	ALYREF	51	88.722	ENSPSIG00000017541	ALYREF	98	90.977	Pelodiscus_sinensis
ENSCPOG00000013710	ALYREF	100	96.887	ENSPPYG00000008749	ALYREF	97	96.887	Pongo_abelii
ENSCPOG00000013710	ALYREF	100	97.656	ENSPCOG00000020874	ALYREF	97	97.656	Propithecus_coquereli
ENSCPOG00000013710	ALYREF	100	80.469	ENSPVAG00000017866	ALYREF	100	80.469	Pteropus_vampyrus
ENSCPOG00000013710	ALYREF	67	98.256	ENSRNOG00000036687	Alyref	91	98.256	Rattus_norvegicus
ENSCPOG00000013710	ALYREF	77	86.188	ENSRBIG00000039651	ALYREF	74	93.370	Rhinopithecus_bieti
ENSCPOG00000013710	ALYREF	91	87.678	ENSRROG00000045364	ALYREF	83	93.839	Rhinopithecus_roxellana
ENSCPOG00000013710	ALYREF	82	84.974	ENSSHAG00000010459	ALYREF	96	94.054	Sarcophilus_harrisii
ENSCPOG00000013710	ALYREF	100	51.439	ENSSDUG00000003992	-	100	53.532	Seriola_dumerili
ENSCPOG00000013710	ALYREF	100	52.000	ENSSLDG00000005386	-	100	54.135	Seriola_lalandi_dorsalis
ENSCPOG00000013710	ALYREF	100	82.443	ENSSPUG00000004600	ALYREF	100	81.679	Sphenodon_punctatus
ENSCPOG00000013710	ALYREF	100	68.100	ENSSPAG00000011178	ALYREF	97	69.534	Stegastes_partitus
ENSCPOG00000013710	ALYREF	100	97.276	ENSSSCG00000032655	ALYREF	100	97.276	Sus_scrofa
ENSCPOG00000013710	ALYREF	51	92.424	ENSTGUG00000003513	ALYREF	100	90.370	Taeniopygia_guttata
ENSCPOG00000013710	ALYREF	100	68.750	ENSTRUG00000008828	ALYREF	100	69.231	Takifugu_rubripes
ENSCPOG00000013710	ALYREF	69	96.629	ENSTBEG00000005834	ALYREF	100	96.629	Tupaia_belangeri
ENSCPOG00000013710	ALYREF	100	96.109	ENSTTRG00000012275	ALYREF	100	96.109	Tursiops_truncatus
ENSCPOG00000013710	ALYREF	69	85.795	ENSUAMG00000016931	ALYREF	66	85.795	Ursus_americanus
ENSCPOG00000013710	ALYREF	69	85.795	ENSUMAG00000016384	ALYREF	65	85.795	Ursus_maritimus
ENSCPOG00000013710	ALYREF	100	75.207	ENSXETG00000005391	alyref	100	77.686	Xenopus_tropicalis