EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000013746 (Gene tree)
Gene ID: 100728991
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 1614 bases
Position: chrDS562877.1:8564894-8566507
Accession: 100728991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012383	DEAD	PF00270.29	4.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000013886	DDX28-201	1614	XM_003472003	ENSCPOP00000012383	537 (aa)	XP_003472051	H0VPG1

Gene Model

Click here to download ENSCPOG00000013746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000013746	DDX28	76	30.072	ENSCPOG00000013626	DDX49	80	30.072
ENSCPOG00000013746	DDX28	71	30.435	ENSCPOG00000008420	DDX59	57	30.435
ENSCPOG00000013746	DDX28	74	30.323	ENSCPOG00000014243	DDX31	60	30.323
ENSCPOG00000013746	DDX28	66	30.312	ENSCPOG00000007133	DDX5	54	30.312
ENSCPOG00000013746	DDX28	72	34.097	ENSCPOG00000035172	DDX47	78	34.097
ENSCPOG00000013746	DDX28	76	30.488	ENSCPOG00000003991	-	59	30.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013746	DDX28	99	80.669	ENSG00000182810	DDX28	99	80.669	Homo_sapiens
ENSCPOG00000013746	DDX28	98	48.339	ENSAPOG00000000991	ddx28	94	48.339	Acanthochromis_polyacanthus
ENSCPOG00000013746	DDX28	99	81.192	ENSAMEG00000019426	DDX28	99	81.192	Ailuropoda_melanoleuca
ENSCPOG00000013746	DDX28	94	49.219	ENSACIG00000021615	ddx28	95	47.601	Amphilophus_citrinellus
ENSCPOG00000013746	DDX28	98	48.529	ENSAOCG00000004610	ddx28	94	48.529	Amphiprion_ocellaris
ENSCPOG00000013746	DDX28	98	48.346	ENSAPEG00000002143	ddx28	94	48.346	Amphiprion_percula
ENSCPOG00000013746	DDX28	95	50.288	ENSATEG00000018691	ddx28	91	50.288	Anabas_testudineus
ENSCPOG00000013746	DDX28	97	53.846	ENSACAG00000009755	DDX28	98	53.846	Anolis_carolinensis
ENSCPOG00000013746	DDX28	93	47.358	ENSACLG00000012984	ddx28	89	47.358	Astatotilapia_calliptera
ENSCPOG00000013746	DDX28	94	49.053	ENSAMXG00000005878	ddx28	91	49.053	Astyanax_mexicanus
ENSCPOG00000013746	DDX28	97	81.154	ENSBTAG00000004290	DDX28	99	80.148	Bos_taurus
ENSCPOG00000013746	DDX28	96	82.012	ENSCAFG00000020327	DDX28	97	82.012	Canis_familiaris
ENSCPOG00000013746	DDX28	96	82.012	ENSCAFG00020019785	DDX28	97	82.012	Canis_lupus_dingo
ENSCPOG00000013746	DDX28	97	80.192	ENSCHIG00000009658	DDX28	99	79.368	Capra_hircus
ENSCPOG00000013746	DDX28	99	79.963	ENSCSAG00000018472	DDX28	99	79.963	Chlorocebus_sabaeus
ENSCPOG00000013746	DDX28	91	56.939	ENSCPBG00000012105	DDX28	87	56.939	Chrysemys_picta_bellii
ENSCPOG00000013746	DDX28	68	38.378	ENSCSAVG00000006341	-	94	38.378	Ciona_savignyi
ENSCPOG00000013746	DDX28	94	79.604	ENSCGRG00001024412	Ddx28	100	78.857	Cricetulus_griseus_chok1gshd
ENSCPOG00000013746	DDX28	94	49.320	ENSCSEG00000011651	ddx28	90	49.320	Cynoglossus_semilaevis
ENSCPOG00000013746	DDX28	94	50.682	ENSCVAG00000004044	ddx28	91	50.682	Cyprinodon_variegatus
ENSCPOG00000013746	DDX28	96	47.901	ENSDARG00000060411	ddx28	92	47.901	Danio_rerio
ENSCPOG00000013746	DDX28	68	82.609	ENSDNOG00000033593	DDX28	99	82.609	Dasypus_novemcinctus
ENSCPOG00000013746	DDX28	99	78.664	ENSDORG00000028868	Ddx28	99	78.664	Dipodomys_ordii
ENSCPOG00000013746	DDX28	88	35.537	FBgn0086130	Dbp21E2	87	35.391	Drosophila_melanogaster
ENSCPOG00000013746	DDX28	98	80.190	ENSETEG00000001062	-	97	80.190	Echinops_telfairi
ENSCPOG00000013746	DDX28	77	43.814	ENSEBUG00000004791	ddx28	78	44.103	Eptatretus_burgeri
ENSCPOG00000013746	DDX28	96	83.752	ENSEASG00005020387	DDX28	98	83.239	Equus_asinus_asinus
ENSCPOG00000013746	DDX28	96	84.109	ENSECAG00000006451	DDX28	98	83.427	Equus_caballus
ENSCPOG00000013746	DDX28	78	71.429	ENSEEUG00000005017	DDX28	98	71.429	Erinaceus_europaeus
ENSCPOG00000013746	DDX28	93	50.682	ENSELUG00000005302	ddx28	97	50.386	Esox_lucius
ENSCPOG00000013746	DDX28	98	82.955	ENSFCAG00000012858	DDX28	98	82.955	Felis_catus
ENSCPOG00000013746	DDX28	95	50.000	ENSFHEG00000012573	ddx28	91	50.000	Fundulus_heteroclitus
ENSCPOG00000013746	DDX28	94	46.525	ENSGMOG00000017045	ddx28	97	46.525	Gadus_morhua
ENSCPOG00000013746	DDX28	94	49.237	ENSGALG00000048700	DDX28	89	50.000	Gallus_gallus
ENSCPOG00000013746	DDX28	94	48.924	ENSGAFG00000009249	ddx28	89	48.924	Gambusia_affinis
ENSCPOG00000013746	DDX28	99	49.259	ENSGACG00000016367	ddx28	99	49.259	Gasterosteus_aculeatus
ENSCPOG00000013746	DDX28	80	56.720	ENSGAGG00000004565	DDX28	95	56.720	Gopherus_agassizii
ENSCPOG00000013746	DDX28	99	80.855	ENSGGOG00000001220	DDX28	99	80.855	Gorilla_gorilla
ENSCPOG00000013746	DDX28	93	49.706	ENSHBUG00000001016	ddx28	90	49.708	Haplochromis_burtoni
ENSCPOG00000013746	DDX28	94	48.170	ENSHCOG00000017590	ddx28	92	48.170	Hippocampus_comes
ENSCPOG00000013746	DDX28	94	49.614	ENSIPUG00000017350	Ddx28	90	49.518	Ictalurus_punctatus
ENSCPOG00000013746	DDX28	98	81.285	ENSSTOG00000002064	DDX28	98	81.285	Ictidomys_tridecemlineatus
ENSCPOG00000013746	DDX28	99	75.000	ENSJJAG00000012460	-	99	75.000	Jaculus_jaculus
ENSCPOG00000013746	DDX28	97	47.932	ENSKMAG00000018183	ddx28	93	47.932	Kryptolebias_marmoratus
ENSCPOG00000013746	DDX28	94	48.738	ENSLBEG00000006072	ddx28	90	48.738	Labrus_bergylta
ENSCPOG00000013746	DDX28	95	54.369	ENSLACG00000005578	DDX28	88	54.369	Latimeria_chalumnae
ENSCPOG00000013746	DDX28	97	51.326	ENSLOCG00000017604	ddx28	93	51.326	Lepisosteus_oculatus
ENSCPOG00000013746	DDX28	95	82.227	ENSLAFG00000031239	DDX28	99	80.519	Loxodonta_africana
ENSCPOG00000013746	DDX28	99	79.963	ENSMMUG00000010836	DDX28	99	79.963	Macaca_mulatta
ENSCPOG00000013746	DDX28	94	49.805	ENSMAMG00000020220	ddx28	90	49.805	Mastacembelus_armatus
ENSCPOG00000013746	DDX28	93	49.511	ENSMZEG00005009292	ddx28	90	49.511	Maylandia_zebra
ENSCPOG00000013746	DDX28	97	68.522	ENSMICG00000012346	-	99	67.778	Microcebus_murinus
ENSCPOG00000013746	DDX28	97	80.998	ENSMOCG00000009815	Ddx28	100	80.000	Microtus_ochrogaster
ENSCPOG00000013746	DDX28	94	50.778	ENSMMOG00000000270	ddx28	91	50.778	Mola_mola
ENSCPOG00000013746	DDX28	96	69.574	ENSMODG00000005303	DDX28	94	69.498	Monodelphis_domestica
ENSCPOG00000013746	DDX28	95	49.326	ENSMALG00000008864	ddx28	90	49.326	Monopterus_albus
ENSCPOG00000013746	DDX28	97	78.311	MGP_CAROLIEiJ_G0031510	Ddx28	100	77.407	Mus_caroli
ENSCPOG00000013746	DDX28	97	78.503	ENSMUSG00000045538	Ddx28	100	77.593	Mus_musculus
ENSCPOG00000013746	DDX28	97	78.695	MGP_PahariEiJ_G0023110	Ddx28	100	77.778	Mus_pahari
ENSCPOG00000013746	DDX28	97	78.503	MGP_SPRETEiJ_G0032628	Ddx28	100	77.593	Mus_spretus
ENSCPOG00000013746	DDX28	75	80.893	ENSMPUG00000006915	DDX28	100	80.893	Mustela_putorius_furo
ENSCPOG00000013746	DDX28	96	79.191	ENSMLUG00000005899	DDX28	96	79.191	Myotis_lucifugus
ENSCPOG00000013746	DDX28	96	79.769	ENSNGAG00000015762	Ddx28	99	78.996	Nannospalax_galili
ENSCPOG00000013746	DDX28	93	49.705	ENSNBRG00000001337	ddx28	91	49.705	Neolamprologus_brichardi
ENSCPOG00000013746	DDX28	93	50.098	ENSONIG00000020597	ddx28	90	50.098	Oreochromis_niloticus
ENSCPOG00000013746	DDX28	55	61.279	ENSOANG00000003551	-	100	61.279	Ornithorhynchus_anatinus
ENSCPOG00000013746	DDX28	100	79.444	ENSOCUG00000023074	DDX28	100	79.444	Oryctolagus_cuniculus
ENSCPOG00000013746	DDX28	94	49.222	ENSORLG00000011968	ddx28	91	49.222	Oryzias_latipes
ENSCPOG00000013746	DDX28	98	47.532	ENSORLG00020001951	ddx28	98	47.532	Oryzias_latipes_hni
ENSCPOG00000013746	DDX28	98	47.166	ENSORLG00015023030	ddx28	98	47.166	Oryzias_latipes_hsok
ENSCPOG00000013746	DDX28	99	47.145	ENSOMEG00000012445	ddx28	96	47.145	Oryzias_melastigma
ENSCPOG00000013746	DDX28	98	79.696	ENSOGAG00000016895	DDX28	99	78.704	Otolemur_garnettii
ENSCPOG00000013746	DDX28	82	76.126	ENSOARG00000003313	DDX28	99	76.126	Ovis_aries
ENSCPOG00000013746	DDX28	99	76.952	ENSPPAG00000036971	DDX28	99	76.952	Pan_paniscus
ENSCPOG00000013746	DDX28	98	83.902	ENSPPRG00000018322	DDX28	98	83.902	Panthera_pardus
ENSCPOG00000013746	DDX28	98	80.303	ENSPTIG00000006444	DDX28	98	80.303	Panthera_tigris_altaica
ENSCPOG00000013746	DDX28	99	80.483	ENSPTRG00000008258	DDX28	99	80.483	Pan_troglodytes
ENSCPOG00000013746	DDX28	95	50.766	ENSPKIG00000021200	ddx28	94	50.766	Paramormyrops_kingsleyae
ENSCPOG00000013746	DDX28	55	62.500	ENSPSIG00000001127	DDX28	97	62.500	Pelodiscus_sinensis
ENSCPOG00000013746	DDX28	93	45.882	ENSPMGG00000007908	ddx28	88	45.882	Periophthalmus_magnuspinnatus
ENSCPOG00000013746	DDX28	98	79.057	ENSPEMG00000003395	Ddx28	98	79.057	Peromyscus_maniculatus_bairdii
ENSCPOG00000013746	DDX28	54	48.973	ENSPMAG00000006983	DDX28	96	48.973	Petromyzon_marinus
ENSCPOG00000013746	DDX28	94	49.027	ENSPFOG00000020838	DDX28	90	49.027	Poecilia_formosa
ENSCPOG00000013746	DDX28	94	49.027	ENSPFOG00000020952	ddx28	89	49.027	Poecilia_formosa
ENSCPOG00000013746	DDX28	94	49.027	ENSPLAG00000016292	ddx28	89	49.027	Poecilia_latipinna
ENSCPOG00000013746	DDX28	94	49.027	ENSPMEG00000011311	ddx28	88	49.027	Poecilia_mexicana
ENSCPOG00000013746	DDX28	98	47.874	ENSPREG00000002899	ddx28	93	47.874	Poecilia_reticulata
ENSCPOG00000013746	DDX28	99	80.855	ENSPPYG00000007481	DDX28	100	80.855	Pongo_abelii
ENSCPOG00000013746	DDX28	100	81.146	ENSPCOG00000024632	DDX28	100	81.146	Propithecus_coquereli
ENSCPOG00000013746	DDX28	93	49.902	ENSPNYG00000018804	ddx28	90	49.902	Pundamilia_nyererei
ENSCPOG00000013746	DDX28	94	50.864	ENSPNAG00000014597	ddx28	94	50.864	Pygocentrus_nattereri
ENSCPOG00000013746	DDX28	97	78.269	ENSRNOG00000019817	Ddx28	99	77.365	Rattus_norvegicus
ENSCPOG00000013746	DDX28	94	51.248	ENSSFOG00015010181	ddx28	95	50.275	Scleropages_formosus
ENSCPOG00000013746	DDX28	89	51.340	ENSSMAG00000006831	ddx28	90	51.340	Scophthalmus_maximus
ENSCPOG00000013746	DDX28	94	48.242	ENSSDUG00000003257	ddx28	89	48.242	Seriola_dumerili
ENSCPOG00000013746	DDX28	94	48.047	ENSSLDG00000004513	ddx28	89	48.047	Seriola_lalandi_dorsalis
ENSCPOG00000013746	DDX28	99	77.840	ENSSARG00000014169	DDX28	99	77.840	Sorex_araneus
ENSCPOG00000013746	DDX28	99	48.364	ENSSPAG00000000988	ddx28	96	48.364	Stegastes_partitus
ENSCPOG00000013746	DDX28	99	81.076	ENSSSCG00000026038	DDX28	99	81.076	Sus_scrofa
ENSCPOG00000013746	DDX28	94	48.617	ENSTRUG00000007815	ddx28	92	48.617	Takifugu_rubripes
ENSCPOG00000013746	DDX28	94	49.605	ENSTNIG00000011352	ddx28	99	49.605	Tetraodon_nigroviridis
ENSCPOG00000013746	DDX28	84	86.758	ENSTBEG00000017695	DDX28	85	86.758	Tupaia_belangeri
ENSCPOG00000013746	DDX28	97	83.846	ENSUAMG00000016116	DDX28	98	83.523	Ursus_americanus
ENSCPOG00000013746	DDX28	90	78.512	ENSUMAG00000019200	DDX28	97	78.512	Ursus_maritimus
ENSCPOG00000013746	DDX28	79	78.923	ENSVVUG00000012876	DDX28	84	78.923	Vulpes_vulpes
ENSCPOG00000013746	DDX28	94	48.819	ENSXETG00000005435	ddx28	99	48.819	Xenopus_tropicalis
ENSCPOG00000013746	DDX28	94	49.416	ENSXCOG00000012364	ddx28	89	49.416	Xiphophorus_couchianus
ENSCPOG00000013746	DDX28	94	49.611	ENSXMAG00000019603	ddx28	92	49.611	Xiphophorus_maculatus