EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000013809 (Gene tree)
Gene ID: 100735579
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 12347 bases
Position: chrDS562863.1:19187049-19199395
Accession: 100735579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012442	Gcd10p	PF04189.13	2.3e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000013949	TRMT6-201	3329	XM_003476595	ENSCPOP00000012442	497 (aa)	XP_003476643	H0VPL1

Gene Model

Click here to download ENSCPOG00000013809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013809	TRMT6	100	87.123	ENSG00000089195	TRMT6	100	87.123	Homo_sapiens
ENSCPOG00000013809	TRMT6	97	57.851	ENSAPOG00000008036	trmt6	98	58.678	Acanthochromis_polyacanthus
ENSCPOG00000013809	TRMT6	100	87.928	ENSAMEG00000010635	TRMT6	100	87.928	Ailuropoda_melanoleuca
ENSCPOG00000013809	TRMT6	96	55.000	ENSACIG00000004608	trmt6	97	54.886	Amphilophus_citrinellus
ENSCPOG00000013809	TRMT6	97	56.965	ENSAOCG00000024322	trmt6	98	56.965	Amphiprion_ocellaris
ENSCPOG00000013809	TRMT6	97	58.836	ENSAPEG00000017334	trmt6	98	58.836	Amphiprion_percula
ENSCPOG00000013809	TRMT6	92	57.516	ENSATEG00000018498	trmt6	97	58.991	Anabas_testudineus
ENSCPOG00000013809	TRMT6	91	74.617	ENSAPLG00000007761	TRMT6	99	74.617	Anas_platyrhynchos
ENSCPOG00000013809	TRMT6	96	69.038	ENSACAG00000000575	TRMT6	89	72.558	Anolis_carolinensis
ENSCPOG00000013809	TRMT6	100	87.525	ENSANAG00000021260	TRMT6	100	87.525	Aotus_nancymaae
ENSCPOG00000013809	TRMT6	96	55.350	ENSACLG00000026034	trmt6	97	55.350	Astatotilapia_calliptera
ENSCPOG00000013809	TRMT6	96	57.557	ENSAMXG00000017116	trmt6	96	57.557	Astyanax_mexicanus
ENSCPOG00000013809	TRMT6	100	86.519	ENSBTAG00000001314	TRMT6	100	86.519	Bos_taurus
ENSCPOG00000013809	TRMT6	100	86.720	ENSCJAG00000021296	TRMT6	100	86.720	Callithrix_jacchus
ENSCPOG00000013809	TRMT6	100	87.324	ENSCAFG00000005969	TRMT6	100	87.324	Canis_familiaris
ENSCPOG00000013809	TRMT6	100	87.324	ENSCAFG00020000777	TRMT6	100	87.324	Canis_lupus_dingo
ENSCPOG00000013809	TRMT6	100	86.318	ENSCHIG00000010338	TRMT6	100	86.318	Capra_hircus
ENSCPOG00000013809	TRMT6	100	87.123	ENSTSYG00000004286	TRMT6	100	87.123	Carlito_syrichta
ENSCPOG00000013809	TRMT6	83	99.517	ENSCAPG00000015467	TRMT6	93	99.517	Cavia_aperea
ENSCPOG00000013809	TRMT6	100	86.519	ENSCCAG00000026939	TRMT6	100	86.519	Cebus_capucinus
ENSCPOG00000013809	TRMT6	100	87.123	ENSCATG00000041111	TRMT6	100	87.123	Cercocebus_atys
ENSCPOG00000013809	TRMT6	100	92.958	ENSCLAG00000013978	TRMT6	100	92.958	Chinchilla_lanigera
ENSCPOG00000013809	TRMT6	100	87.525	ENSCSAG00000013461	TRMT6	100	87.525	Chlorocebus_sabaeus
ENSCPOG00000013809	TRMT6	84	77.898	ENSCHOG00000012537	TRMT6	83	77.898	Choloepus_hoffmanni
ENSCPOG00000013809	TRMT6	96	74.113	ENSCPBG00000023406	TRMT6	98	74.113	Chrysemys_picta_bellii
ENSCPOG00000013809	TRMT6	89	34.839	ENSCING00000002472	-	96	34.513	Ciona_intestinalis
ENSCPOG00000013809	TRMT6	87	41.084	ENSCSAVG00000001680	-	94	40.465	Ciona_savignyi
ENSCPOG00000013809	TRMT6	100	86.922	ENSCANG00000002381	TRMT6	100	86.922	Colobus_angolensis_palliatus
ENSCPOG00000013809	TRMT6	100	85.312	ENSCGRG00001003385	Trmt6	100	85.312	Cricetulus_griseus_chok1gshd
ENSCPOG00000013809	TRMT6	100	85.312	ENSCGRG00000006540	Trmt6	100	85.312	Cricetulus_griseus_crigri
ENSCPOG00000013809	TRMT6	97	57.380	ENSCSEG00000002228	trmt6	98	57.380	Cynoglossus_semilaevis
ENSCPOG00000013809	TRMT6	97	56.289	ENSCVAG00000000341	trmt6	98	56.289	Cyprinodon_variegatus
ENSCPOG00000013809	TRMT6	97	57.557	ENSDARG00000042344	trmt6	97	57.557	Danio_rerio
ENSCPOG00000013809	TRMT6	100	81.944	ENSDNOG00000012785	TRMT6	100	81.944	Dasypus_novemcinctus
ENSCPOG00000013809	TRMT6	100	86.922	ENSDORG00000006458	Trmt6	99	86.922	Dipodomys_ordii
ENSCPOG00000013809	TRMT6	66	48.936	ENSETEG00000017282	-	95	49.387	Echinops_telfairi
ENSCPOG00000013809	TRMT6	60	90.909	ENSETEG00000003490	-	60	90.909	Echinops_telfairi
ENSCPOG00000013809	TRMT6	100	88.330	ENSEASG00005001411	TRMT6	99	88.618	Equus_asinus_asinus
ENSCPOG00000013809	TRMT6	100	88.330	ENSECAG00000023914	TRMT6	100	88.330	Equus_caballus
ENSCPOG00000013809	TRMT6	99	84.476	ENSEEUG00000006635	TRMT6	99	84.476	Erinaceus_europaeus
ENSCPOG00000013809	TRMT6	96	59.671	ENSELUG00000013378	trmt6	79	61.572	Esox_lucius
ENSCPOG00000013809	TRMT6	100	87.928	ENSFCAG00000003102	TRMT6	100	87.928	Felis_catus
ENSCPOG00000013809	TRMT6	90	73.673	ENSFALG00000013575	TRMT6	97	74.336	Ficedula_albicollis
ENSCPOG00000013809	TRMT6	100	91.549	ENSFDAG00000015117	TRMT6	100	91.549	Fukomys_damarensis
ENSCPOG00000013809	TRMT6	96	57.676	ENSFHEG00000019957	trmt6	97	57.676	Fundulus_heteroclitus
ENSCPOG00000013809	TRMT6	71	68.627	ENSGMOG00000011059	trmt6	96	65.079	Gadus_morhua
ENSCPOG00000013809	TRMT6	95	72.899	ENSGALG00000009169	TRMT6	97	72.899	Gallus_gallus
ENSCPOG00000013809	TRMT6	97	56.289	ENSGAFG00000008618	trmt6	98	56.173	Gambusia_affinis
ENSCPOG00000013809	TRMT6	94	56.290	ENSGACG00000012471	trmt6	97	56.290	Gasterosteus_aculeatus
ENSCPOG00000013809	TRMT6	96	73.695	ENSGAGG00000008464	TRMT6	98	73.695	Gopherus_agassizii
ENSCPOG00000013809	TRMT6	100	87.525	ENSGGOG00000008597	TRMT6	100	87.525	Gorilla_gorilla
ENSCPOG00000013809	TRMT6	96	55.350	ENSHBUG00000016631	trmt6	98	55.350	Haplochromis_burtoni
ENSCPOG00000013809	TRMT6	100	90.342	ENSHGLG00000015405	TRMT6	100	90.342	Heterocephalus_glaber_female
ENSCPOG00000013809	TRMT6	100	90.342	ENSHGLG00100004120	TRMT6	100	90.342	Heterocephalus_glaber_male
ENSCPOG00000013809	TRMT6	96	57.708	ENSHCOG00000000118	trmt6	98	57.708	Hippocampus_comes
ENSCPOG00000013809	TRMT6	95	59.664	ENSIPUG00000019365	trmt6	97	60.084	Ictalurus_punctatus
ENSCPOG00000013809	TRMT6	100	88.129	ENSSTOG00000006863	TRMT6	100	88.129	Ictidomys_tridecemlineatus
ENSCPOG00000013809	TRMT6	99	85.253	ENSJJAG00000007315	Trmt6	99	85.253	Jaculus_jaculus
ENSCPOG00000013809	TRMT6	95	57.203	ENSKMAG00000001295	trmt6	97	58.455	Kryptolebias_marmoratus
ENSCPOG00000013809	TRMT6	99	55.000	ENSLBEG00000025654	trmt6	100	55.110	Labrus_bergylta
ENSCPOG00000013809	TRMT6	98	67.623	ENSLACG00000016478	TRMT6	98	67.623	Latimeria_chalumnae
ENSCPOG00000013809	TRMT6	99	63.052	ENSLOCG00000016451	trmt6	99	63.052	Lepisosteus_oculatus
ENSCPOG00000013809	TRMT6	99	85.628	ENSLAFG00000032216	TRMT6	99	85.628	Loxodonta_africana
ENSCPOG00000013809	TRMT6	100	87.726	ENSMFAG00000044360	TRMT6	100	87.726	Macaca_fascicularis
ENSCPOG00000013809	TRMT6	100	87.726	ENSMMUG00000013728	TRMT6	100	87.726	Macaca_mulatta
ENSCPOG00000013809	TRMT6	100	87.525	ENSMNEG00000041831	TRMT6	100	87.525	Macaca_nemestrina
ENSCPOG00000013809	TRMT6	100	87.123	ENSMLEG00000040762	TRMT6	100	87.123	Mandrillus_leucophaeus
ENSCPOG00000013809	TRMT6	97	56.024	ENSMAMG00000012101	trmt6	99	57.404	Mastacembelus_armatus
ENSCPOG00000013809	TRMT6	96	55.350	ENSMZEG00005010771	trmt6	97	55.350	Maylandia_zebra
ENSCPOG00000013809	TRMT6	95	73.109	ENSMGAG00000007678	TRMT6	97	73.109	Meleagris_gallopavo
ENSCPOG00000013809	TRMT6	100	85.915	ENSMAUG00000008719	Trmt6	100	85.915	Mesocricetus_auratus
ENSCPOG00000013809	TRMT6	99	87.525	ENSMICG00000011626	TRMT6	99	87.525	Microcebus_murinus
ENSCPOG00000013809	TRMT6	100	86.117	ENSMOCG00000022320	Trmt6	100	86.117	Microtus_ochrogaster
ENSCPOG00000013809	TRMT6	96	55.000	ENSMMOG00000004412	trmt6	97	55.000	Mola_mola
ENSCPOG00000013809	TRMT6	99	76.008	ENSMODG00000003784	TRMT6	99	76.008	Monodelphis_domestica
ENSCPOG00000013809	TRMT6	97	53.830	ENSMALG00000018140	trmt6	97	53.830	Monopterus_albus
ENSCPOG00000013809	TRMT6	99	84.008	MGP_CAROLIEiJ_G0024344	Trmt6	99	84.008	Mus_caroli
ENSCPOG00000013809	TRMT6	99	84.211	ENSMUSG00000037376	Trmt6	99	84.211	Mus_musculus
ENSCPOG00000013809	TRMT6	99	84.615	MGP_PahariEiJ_G0025789	Trmt6	99	84.615	Mus_pahari
ENSCPOG00000013809	TRMT6	99	84.413	MGP_SPRETEiJ_G0025264	Trmt6	99	84.413	Mus_spretus
ENSCPOG00000013809	TRMT6	87	87.788	ENSMPUG00000006317	TRMT6	93	87.788	Mustela_putorius_furo
ENSCPOG00000013809	TRMT6	100	87.123	ENSMLUG00000006491	TRMT6	100	87.123	Myotis_lucifugus
ENSCPOG00000013809	TRMT6	99	85.163	ENSNGAG00000015251	Trmt6	99	85.163	Nannospalax_galili
ENSCPOG00000013809	TRMT6	96	52.917	ENSNBRG00000020261	trmt6	98	52.917	Neolamprologus_brichardi
ENSCPOG00000013809	TRMT6	100	87.525	ENSNLEG00000013957	TRMT6	100	87.525	Nomascus_leucogenys
ENSCPOG00000013809	TRMT6	85	78.385	ENSMEUG00000009179	TRMT6	100	78.385	Notamacropus_eugenii
ENSCPOG00000013809	TRMT6	100	83.735	ENSOPRG00000008564	TRMT6	100	83.735	Ochotona_princeps
ENSCPOG00000013809	TRMT6	100	91.751	ENSODEG00000005657	TRMT6	100	91.751	Octodon_degus
ENSCPOG00000013809	TRMT6	96	55.967	ENSONIG00000000968	trmt6	98	55.967	Oreochromis_niloticus
ENSCPOG00000013809	TRMT6	91	78.022	ENSOANG00000008403	-	99	78.022	Ornithorhynchus_anatinus
ENSCPOG00000013809	TRMT6	100	87.123	ENSOCUG00000014669	TRMT6	100	87.123	Oryctolagus_cuniculus
ENSCPOG00000013809	TRMT6	87	56.582	ENSORLG00000009862	trmt6	90	56.582	Oryzias_latipes
ENSCPOG00000013809	TRMT6	96	54.507	ENSORLG00020001466	trmt6	97	54.507	Oryzias_latipes_hni
ENSCPOG00000013809	TRMT6	87	57.044	ENSORLG00015015552	trmt6	90	56.651	Oryzias_latipes_hsok
ENSCPOG00000013809	TRMT6	96	54.489	ENSOMEG00000019874	trmt6	97	54.489	Oryzias_melastigma
ENSCPOG00000013809	TRMT6	100	84.739	ENSOGAG00000012950	TRMT6	99	84.739	Otolemur_garnettii
ENSCPOG00000013809	TRMT6	100	86.519	ENSOARG00000017993	TRMT6	100	86.519	Ovis_aries
ENSCPOG00000013809	TRMT6	100	87.149	ENSPPAG00000036809	TRMT6	100	87.149	Pan_paniscus
ENSCPOG00000013809	TRMT6	100	88.129	ENSPPRG00000000424	TRMT6	100	88.129	Panthera_pardus
ENSCPOG00000013809	TRMT6	100	88.129	ENSPTIG00000010629	TRMT6	100	88.129	Panthera_tigris_altaica
ENSCPOG00000013809	TRMT6	100	87.525	ENSPTRG00000013231	TRMT6	100	87.525	Pan_troglodytes
ENSCPOG00000013809	TRMT6	100	87.324	ENSPANG00000009284	TRMT6	100	87.324	Papio_anubis
ENSCPOG00000013809	TRMT6	96	59.833	ENSPKIG00000003441	trmt6	97	58.664	Paramormyrops_kingsleyae
ENSCPOG00000013809	TRMT6	96	73.333	ENSPSIG00000017048	TRMT6	97	73.333	Pelodiscus_sinensis
ENSCPOG00000013809	TRMT6	87	56.782	ENSPMGG00000021074	trmt6	90	57.044	Periophthalmus_magnuspinnatus
ENSCPOG00000013809	TRMT6	97	85.477	ENSPEMG00000023268	Trmt6	100	84.569	Peromyscus_maniculatus_bairdii
ENSCPOG00000013809	TRMT6	99	76.861	ENSPCIG00000001546	TRMT6	97	76.861	Phascolarctos_cinereus
ENSCPOG00000013809	TRMT6	97	56.237	ENSPFOG00000003037	trmt6	98	56.237	Poecilia_formosa
ENSCPOG00000013809	TRMT6	97	56.907	ENSPLAG00000005143	trmt6	98	56.907	Poecilia_latipinna
ENSCPOG00000013809	TRMT6	97	56.701	ENSPMEG00000014875	trmt6	98	56.701	Poecilia_mexicana
ENSCPOG00000013809	TRMT6	97	52.807	ENSPREG00000016227	trmt6	97	53.638	Poecilia_reticulata
ENSCPOG00000013809	TRMT6	100	87.123	ENSPPYG00000010691	TRMT6	100	87.123	Pongo_abelii
ENSCPOG00000013809	TRMT6	100	84.708	ENSPCAG00000012098	TRMT6	100	84.708	Procavia_capensis
ENSCPOG00000013809	TRMT6	100	87.149	ENSPCOG00000020723	TRMT6	100	87.149	Propithecus_coquereli
ENSCPOG00000013809	TRMT6	99	83.065	ENSPVAG00000007539	TRMT6	99	83.065	Pteropus_vampyrus
ENSCPOG00000013809	TRMT6	96	54.393	ENSPNYG00000000918	trmt6	98	54.393	Pundamilia_nyererei
ENSCPOG00000013809	TRMT6	97	58.571	ENSPNAG00000019279	trmt6	98	58.418	Pygocentrus_nattereri
ENSCPOG00000013809	TRMT6	99	84.615	ENSRNOG00000021270	Trmt6	99	84.615	Rattus_norvegicus
ENSCPOG00000013809	TRMT6	100	86.117	ENSRBIG00000031132	TRMT6	100	86.117	Rhinopithecus_bieti
ENSCPOG00000013809	TRMT6	100	87.324	ENSRROG00000045329	TRMT6	100	87.324	Rhinopithecus_roxellana
ENSCPOG00000013809	TRMT6	85	85.523	ENSSBOG00000019803	-	99	85.523	Saimiri_boliviensis_boliviensis
ENSCPOG00000013809	TRMT6	100	87.324	ENSSBOG00000033602	-	100	87.324	Saimiri_boliviensis_boliviensis
ENSCPOG00000013809	TRMT6	98	76.687	ENSSHAG00000010754	TRMT6	96	76.687	Sarcophilus_harrisii
ENSCPOG00000013809	TRMT6	96	62.423	ENSSFOG00015008429	trmt6	97	61.396	Scleropages_formosus
ENSCPOG00000013809	TRMT6	96	57.796	ENSSMAG00000005352	trmt6	98	58.333	Scophthalmus_maximus
ENSCPOG00000013809	TRMT6	97	57.732	ENSSDUG00000008294	trmt6	98	59.259	Seriola_dumerili
ENSCPOG00000013809	TRMT6	97	58.848	ENSSLDG00000002180	trmt6	98	59.671	Seriola_lalandi_dorsalis
ENSCPOG00000013809	TRMT6	100	81.489	ENSSARG00000005487	TRMT6	100	81.489	Sorex_araneus
ENSCPOG00000013809	TRMT6	96	58.884	ENSSPAG00000011628	trmt6	98	59.091	Stegastes_partitus
ENSCPOG00000013809	TRMT6	100	87.123	ENSSSCG00000007046	TRMT6	72	87.123	Sus_scrofa
ENSCPOG00000013809	TRMT6	95	73.109	ENSTGUG00000002195	TRMT6	97	74.370	Taeniopygia_guttata
ENSCPOG00000013809	TRMT6	96	55.417	ENSTRUG00000007153	trmt6	97	55.417	Takifugu_rubripes
ENSCPOG00000013809	TRMT6	97	56.967	ENSTNIG00000010726	TRMT6	98	56.967	Tetraodon_nigroviridis
ENSCPOG00000013809	TRMT6	76	89.677	ENSTBEG00000016317	TRMT6	76	89.677	Tupaia_belangeri
ENSCPOG00000013809	TRMT6	100	87.123	ENSTTRG00000012889	TRMT6	100	87.123	Tursiops_truncatus
ENSCPOG00000013809	TRMT6	100	87.726	ENSUAMG00000008674	TRMT6	100	87.726	Ursus_americanus
ENSCPOG00000013809	TRMT6	100	87.726	ENSUMAG00000004999	TRMT6	100	87.726	Ursus_maritimus
ENSCPOG00000013809	TRMT6	100	86.853	ENSVPAG00000002371	TRMT6	100	86.853	Vicugna_pacos
ENSCPOG00000013809	TRMT6	100	87.726	ENSVVUG00000023370	TRMT6	100	87.726	Vulpes_vulpes
ENSCPOG00000013809	TRMT6	96	64.490	ENSXETG00000004501	trmt6	98	64.490	Xenopus_tropicalis
ENSCPOG00000013809	TRMT6	97	52.391	ENSXCOG00000007761	trmt6	98	52.391	Xiphophorus_couchianus
ENSCPOG00000013809	TRMT6	97	56.432	ENSXMAG00000008592	trmt6	98	56.432	Xiphophorus_maculatus