EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000013960 (Gene tree)
Gene ID: 100722613
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 1989 bases
Position: chrDS562914.1:5521785-5523773
Accession: 100722613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012578	KH_1	PF00013.29	3.2e-10	1	1
ENSCPOP00000012578	DEAD	PF00270.29	5.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000014101	-	1989	XM_003466423	ENSCPOP00000012578	662 (aa)	XP_003466471	H0VPY2

Gene Model

Click here to download ENSCPOG00000013960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000013960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000013960	-	54	35.833	ENSCPOG00000002009	DDX27	53	35.208
ENSCPOG00000013960	-	51	30.303	ENSCPOG00000014243	DDX31	54	30.303
ENSCPOG00000013960	-	55	31.233	ENSCPOG00000011183	-	88	31.233
ENSCPOG00000013960	-	50	33.628	ENSCPOG00000004327	DDX4	50	33.628
ENSCPOG00000013960	-	65	31.637	ENSCPOG00000039190	-	72	31.637
ENSCPOG00000013960	-	66	41.216	ENSCPOG00000007133	DDX5	71	41.216
ENSCPOG00000013960	-	67	34.934	ENSCPOG00000008770	DDX41	71	34.934
ENSCPOG00000013960	-	58	32.997	ENSCPOG00000035172	DDX47	85	32.997
ENSCPOG00000013960	-	89	69.898	ENSCPOG00000003991	-	89	69.898
ENSCPOG00000013960	-	77	33.723	ENSCPOG00000005633	DDX42	53	33.723
ENSCPOG00000013960	-	59	36.585	ENSCPOG00000020978	-	62	36.585
ENSCPOG00000013960	-	53	32.955	ENSCPOG00000006485	EIF4A3	84	32.955
ENSCPOG00000013960	-	59	31.552	ENSCPOG00000008420	DDX59	61	31.552
ENSCPOG00000013960	-	67	37.131	ENSCPOG00000003278	DDX23	55	37.288
ENSCPOG00000013960	-	60	37.288	ENSCPOG00000013557	-	62	37.288
ENSCPOG00000013960	-	66	41.348	ENSCPOG00000011790	DDX17	87	41.444
ENSCPOG00000013960	-	62	30.947	ENSCPOG00000001232	DDX52	74	30.670
ENSCPOG00000013960	-	57	32.905	ENSCPOG00000013626	DDX49	78	32.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000013960	-	91	70.413	ENSAMEG00000019953	-	98	70.413	Ailuropoda_melanoleuca
ENSCPOG00000013960	-	92	68.123	ENSBTAG00000046635	-	97	68.699	Bos_taurus
ENSCPOG00000013960	-	58	71.654	ENSCAFG00020005312	-	82	71.279	Canis_lupus_dingo
ENSCPOG00000013960	-	96	65.566	ENSCHIG00000020582	-	99	65.723	Capra_hircus
ENSCPOG00000013960	-	99	79.198	ENSCLAG00000017424	-	100	79.198	Chinchilla_lanigera
ENSCPOG00000013960	-	89	70.798	ENSEASG00005001728	-	92	69.752	Equus_asinus_asinus
ENSCPOG00000013960	-	89	70.289	ENSECAG00000035665	-	96	69.256	Equus_caballus
ENSCPOG00000013960	-	89	70.628	ENSECAG00000037015	DDX53	96	69.587	Equus_caballus
ENSCPOG00000013960	-	74	81.429	ENSFDAG00000020660	-	96	81.429	Fukomys_damarensis
ENSCPOG00000013960	-	65	63.488	ENSFDAG00000018215	-	84	65.995	Fukomys_damarensis
ENSCPOG00000013960	-	95	70.437	ENSSTOG00000027719	-	79	74.875	Ictidomys_tridecemlineatus
ENSCPOG00000013960	-	99	65.000	ENSLAFG00000011531	-	95	68.750	Loxodonta_africana
ENSCPOG00000013960	-	89	71.986	ENSMPUG00000019441	-	98	70.744	Mustela_putorius_furo
ENSCPOG00000013960	-	90	67.388	ENSMLUG00000022233	-	98	67.273	Myotis_lucifugus
ENSCPOG00000013960	-	89	68.421	ENSMLUG00000022321	-	99	64.448	Myotis_lucifugus
ENSCPOG00000013960	-	89	70.748	ENSOCUG00000004437	-	93	69.652	Oryctolagus_cuniculus
ENSCPOG00000013960	-	91	69.551	ENSOGAG00000026282	-	94	69.536	Otolemur_garnettii
ENSCPOG00000013960	-	96	66.352	ENSOARG00000016525	-	99	66.509	Ovis_aries
ENSCPOG00000013960	-	89	72.279	ENSPPRG00000011327	-	99	67.474	Panthera_pardus
ENSCPOG00000013960	-	89	72.109	ENSPTIG00000001243	-	99	67.325	Panthera_tigris_altaica
ENSCPOG00000013960	-	99	64.599	ENSPVAG00000001484	-	99	64.750	Pteropus_vampyrus
ENSCPOG00000013960	-	91	70.909	ENSSSCG00000012169	-	99	67.223	Sus_scrofa
ENSCPOG00000013960	-	92	68.534	ENSTBEG00000014650	-	94	68.937	Tupaia_belangeri
ENSCPOG00000013960	-	99	58.371	ENSTTRG00000016514	-	95	61.084	Tursiops_truncatus
ENSCPOG00000013960	-	91	71.570	ENSUAMG00000000177	-	94	71.570	Ursus_americanus
ENSCPOG00000013960	-	56	77.358	ENSUMAG00000011448	-	91	73.067	Ursus_maritimus
ENSCPOG00000013960	-	99	65.507	ENSVPAG00000007860	-	95	69.028	Vicugna_pacos
ENSCPOG00000013960	-	91	70.647	ENSVVUG00000012789	-	96	70.861	Vulpes_vulpes