EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014027 (Gene tree)
Gene ID: 100715445
Gene Symbol: -
Alias: -
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 73222 bases
Position: chrDS562863.1:12103780-12177001
Accession: 100715445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012634	NUC153	PF08159.12	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000014169	-	3171	XM_003476539	ENSCPOP00000012634	831 (aa)	XP_003476587	H0VQ32

Gene Model

Click here to download ENSCPOG00000014027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014027	-	100	80.634	ENSG00000089048	ESF1	99	84.735	Homo_sapiens
ENSCPOG00000014027	-	60	54.476	ENSAPOG00000003004	esf1	99	53.714	Acanthochromis_polyacanthus
ENSCPOG00000014027	-	100	78.480	ENSAMEG00000008830	ESF1	100	77.895	Ailuropoda_melanoleuca
ENSCPOG00000014027	-	77	69.333	ENSACIG00000018305	esf1	95	69.444	Amphilophus_citrinellus
ENSCPOG00000014027	-	76	72.727	ENSAOCG00000006033	esf1	88	72.222	Amphiprion_ocellaris
ENSCPOG00000014027	-	76	72.727	ENSAPEG00000022385	esf1	88	72.222	Amphiprion_percula
ENSCPOG00000014027	-	78	71.622	ENSATEG00000016321	esf1	85	72.222	Anabas_testudineus
ENSCPOG00000014027	-	67	73.694	ENSAPLG00000012113	ESF1	100	59.815	Anas_platyrhynchos
ENSCPOG00000014027	-	67	72.824	ENSACAG00000000963	ESF1	66	73.250	Anolis_carolinensis
ENSCPOG00000014027	-	100	81.861	ENSANAG00000036778	ESF1	100	81.861	Aotus_nancymaae
ENSCPOG00000014027	-	84	68.831	ENSACLG00000002972	esf1	87	68.056	Astatotilapia_calliptera
ENSCPOG00000014027	-	76	63.204	ENSAMXG00000001172	esf1	92	63.889	Astyanax_mexicanus
ENSCPOG00000014027	-	100	77.881	ENSBTAG00000007130	ESF1	100	78.813	Bos_taurus
ENSCPOG00000014027	-	100	82.012	ENSCJAG00000004640	ESF1	100	82.367	Callithrix_jacchus
ENSCPOG00000014027	-	100	79.765	ENSCAFG00000005587	ESF1	100	79.294	Canis_familiaris
ENSCPOG00000014027	-	100	79.765	ENSCAFG00020027530	ESF1	100	79.294	Canis_lupus_dingo
ENSCPOG00000014027	-	100	80.502	ENSCHIG00000021188	ESF1	100	81.100	Capra_hircus
ENSCPOG00000014027	-	100	81.398	ENSTSYG00000009956	ESF1	100	81.517	Carlito_syrichta
ENSCPOG00000014027	-	85	96.748	ENSCAPG00000010333	-	100	97.561	Cavia_aperea
ENSCPOG00000014027	-	100	81.468	ENSCAPG00000010466	-	100	80.505	Cavia_aperea
ENSCPOG00000014027	-	100	81.700	ENSCCAG00000024521	ESF1	100	81.936	Cebus_capucinus
ENSCPOG00000014027	-	100	81.103	ENSCATG00000042792	ESF1	100	82.394	Cercocebus_atys
ENSCPOG00000014027	-	100	88.969	ENSCLAG00000013266	-	100	88.969	Chinchilla_lanigera
ENSCPOG00000014027	-	100	80.941	ENSCSAG00000011777	ESF1	100	82.000	Chlorocebus_sabaeus
ENSCPOG00000014027	-	73	42.342	ENSCSAVG00000009015	-	87	47.619	Ciona_savignyi
ENSCPOG00000014027	-	100	80.913	ENSCANG00000030674	ESF1	100	81.616	Colobus_angolensis_palliatus
ENSCPOG00000014027	-	100	80.191	ENSCGRG00001018257	Esf1	100	80.549	Cricetulus_griseus_chok1gshd
ENSCPOG00000014027	-	74	64.615	ENSCSEG00000001159	esf1	91	65.079	Cynoglossus_semilaevis
ENSCPOG00000014027	-	74	70.769	ENSCVAG00000007894	esf1	90	71.429	Cyprinodon_variegatus
ENSCPOG00000014027	-	75	64.865	ENSDARG00000008740	esf1	86	65.278	Danio_rerio
ENSCPOG00000014027	-	100	78.369	ENSDNOG00000019409	ESF1	100	78.960	Dasypus_novemcinctus
ENSCPOG00000014027	-	100	81.310	ENSDORG00000016313	Esf1	100	81.786	Dipodomys_ordii
ENSCPOG00000014027	-	76	50.588	FBgn0024364	CG11417	86	55.714	Drosophila_melanogaster
ENSCPOG00000014027	-	81	82.303	ENSETEG00000004471	ESF1	79	82.303	Echinops_telfairi
ENSCPOG00000014027	-	67	50.510	ENSEBUG00000015161	esf1	87	50.856	Eptatretus_burgeri
ENSCPOG00000014027	-	100	79.976	ENSEASG00005001777	ESF1	100	79.859	Equus_asinus_asinus
ENSCPOG00000014027	-	100	79.976	ENSECAG00000019188	ESF1	100	79.859	Equus_caballus
ENSCPOG00000014027	-	74	59.184	ENSEEUG00000015837	-	99	58.870	Erinaceus_europaeus
ENSCPOG00000014027	-	66	58.194	ENSELUG00000000408	esf1	80	57.617	Esox_lucius
ENSCPOG00000014027	-	100	80.653	ENSFCAG00000000919	ESF1	100	80.186	Felis_catus
ENSCPOG00000014027	-	66	74.054	ENSFALG00000010914	ESF1	99	61.916	Ficedula_albicollis
ENSCPOG00000014027	-	100	87.620	ENSFDAG00000014777	ESF1	100	87.260	Fukomys_damarensis
ENSCPOG00000014027	-	60	59.010	ENSFHEG00000014984	esf1	99	59.604	Fundulus_heteroclitus
ENSCPOG00000014027	-	100	60.967	ENSGALG00000034768	ESF1	100	60.069	Gallus_gallus
ENSCPOG00000014027	-	76	64.865	ENSGAFG00000000540	esf1	90	65.278	Gambusia_affinis
ENSCPOG00000014027	-	100	80.282	ENSGGOG00000006692	ESF1	100	81.103	Gorilla_gorilla
ENSCPOG00000014027	-	84	70.130	ENSHBUG00000001890	esf1	87	69.444	Haplochromis_burtoni
ENSCPOG00000014027	-	100	88.101	ENSHGLG00000011505	ESF1	100	87.380	Heterocephalus_glaber_female
ENSCPOG00000014027	-	100	88.101	ENSHGLG00100015045	ESF1	100	87.380	Heterocephalus_glaber_male
ENSCPOG00000014027	-	76	66.667	ENSIPUG00000006507	esf1	85	66.667	Ictalurus_punctatus
ENSCPOG00000014027	-	100	83.294	ENSSTOG00000009846	ESF1	100	82.936	Ictidomys_tridecemlineatus
ENSCPOG00000014027	-	100	80.401	ENSJJAG00000012570	Esf1	100	80.756	Jaculus_jaculus
ENSCPOG00000014027	-	76	67.949	ENSLOCG00000015979	esf1	76	59.903	Lepisosteus_oculatus
ENSCPOG00000014027	-	100	79.976	ENSLAFG00000005479	ESF1	100	80.572	Loxodonta_africana
ENSCPOG00000014027	-	100	80.986	ENSMFAG00000036841	ESF1	100	82.277	Macaca_fascicularis
ENSCPOG00000014027	-	100	80.986	ENSMNEG00000044042	ESF1	100	82.277	Macaca_nemestrina
ENSCPOG00000014027	-	100	80.869	ENSMLEG00000037121	ESF1	100	82.160	Mandrillus_leucophaeus
ENSCPOG00000014027	-	78	71.622	ENSMAMG00000018648	esf1	88	72.222	Mastacembelus_armatus
ENSCPOG00000014027	-	60	57.937	ENSMZEG00005013912	esf1	99	57.738	Maylandia_zebra
ENSCPOG00000014027	-	100	61.494	ENSMGAG00000004291	ESF1	100	61.529	Meleagris_gallopavo
ENSCPOG00000014027	-	100	80.430	ENSMAUG00000015975	Esf1	100	81.384	Mesocricetus_auratus
ENSCPOG00000014027	-	100	82.139	ENSMICG00000010711	ESF1	100	82.961	Microcebus_murinus
ENSCPOG00000014027	-	100	78.998	ENSMOCG00000005902	Esf1	100	79.952	Microtus_ochrogaster
ENSCPOG00000014027	-	60	58.555	ENSMMOG00000018693	esf1	99	59.280	Mola_mola
ENSCPOG00000014027	-	100	69.941	ENSMODG00000005066	ESF1	100	69.704	Monodelphis_domestica
ENSCPOG00000014027	-	70	67.568	ENSMALG00000007338	esf1	84	68.056	Monopterus_albus
ENSCPOG00000014027	-	100	79.691	MGP_CAROLIEiJ_G0024365	Esf1	100	80.404	Mus_caroli
ENSCPOG00000014027	-	100	78.935	ENSMUSG00000045624	Esf1	100	79.763	Mus_musculus
ENSCPOG00000014027	-	100	79.929	MGP_PahariEiJ_G0025810	Esf1	100	79.810	Mus_pahari
ENSCPOG00000014027	-	100	79.167	MGP_SPRETEiJ_G0025285	Esf1	100	79.762	Mus_spretus
ENSCPOG00000014027	-	100	80.634	ENSMPUG00000001450	ESF1	100	80.729	Mustela_putorius_furo
ENSCPOG00000014027	-	100	80.212	ENSMLUG00000013080	ESF1	100	80.565	Myotis_lucifugus
ENSCPOG00000014027	-	100	78.991	ENSNLEG00000014563	ESF1	100	79.812	Nomascus_leucogenys
ENSCPOG00000014027	-	61	82.213	ENSOPRG00000004862	ESF1	100	82.213	Ochotona_princeps
ENSCPOG00000014027	-	100	87.275	ENSODEG00000006824	ESF1	100	87.035	Octodon_degus
ENSCPOG00000014027	-	78	70.130	ENSONIG00000006804	esf1	87	69.444	Oreochromis_niloticus
ENSCPOG00000014027	-	100	70.388	ENSOANG00000008432	-	100	70.858	Ornithorhynchus_anatinus
ENSCPOG00000014027	-	100	78.173	ENSOCUG00000005414	ESF1	100	78.529	Oryctolagus_cuniculus
ENSCPOG00000014027	-	60	54.631	ENSORLG00000018625	esf1	99	52.820	Oryzias_latipes
ENSCPOG00000014027	-	76	66.667	ENSORLG00015022826	esf1	91	65.278	Oryzias_latipes_hsok
ENSCPOG00000014027	-	60	55.086	ENSOMEG00000009311	esf1	99	56.190	Oryzias_melastigma
ENSCPOG00000014027	-	100	78.665	ENSOGAG00000016912	ESF1	100	78.903	Otolemur_garnettii
ENSCPOG00000014027	-	67	88.649	ENSOARG00000011158	ESF1	100	77.045	Ovis_aries
ENSCPOG00000014027	-	100	81.087	ENSPPAG00000024379	ESF1	100	81.206	Pan_paniscus
ENSCPOG00000014027	-	100	80.351	ENSPPRG00000012007	ESF1	100	80.585	Panthera_pardus
ENSCPOG00000014027	-	100	80.445	ENSPTIG00000020063	ESF1	100	80.679	Panthera_tigris_altaica
ENSCPOG00000014027	-	100	80.188	ENSPTRG00000013258	ESF1	100	80.774	Pan_troglodytes
ENSCPOG00000014027	-	66	62.976	ENSPKIG00000024448	esf1	69	61.938	Paramormyrops_kingsleyae
ENSCPOG00000014027	-	77	62.338	ENSPMGG00000016911	esf1	81	62.500	Periophthalmus_magnuspinnatus
ENSCPOG00000014027	-	100	69.679	ENSPCIG00000019331	ESF1	100	71.700	Phascolarctos_cinereus
ENSCPOG00000014027	-	78	60.811	ENSPFOG00000010101	esf1	88	62.500	Poecilia_formosa
ENSCPOG00000014027	-	60	58.661	ENSPLAG00000006452	esf1	99	58.465	Poecilia_latipinna
ENSCPOG00000014027	-	79	62.162	ENSPMEG00000000713	esf1	88	62.500	Poecilia_mexicana
ENSCPOG00000014027	-	79	62.162	ENSPREG00000004431	esf1	86	62.500	Poecilia_reticulata
ENSCPOG00000014027	-	100	81.125	ENSPPYG00000010715	ESF1	100	81.712	Pongo_abelii
ENSCPOG00000014027	-	100	73.665	ENSPCAG00000006881	ESF1	100	73.634	Procavia_capensis
ENSCPOG00000014027	-	83	94.444	ENSPVAG00000001295	ESF1	83	94.444	Pteropus_vampyrus
ENSCPOG00000014027	-	82	67.532	ENSPNYG00000015735	esf1	88	68.056	Pundamilia_nyererei
ENSCPOG00000014027	-	75	63.514	ENSPNAG00000014721	esf1	84	63.889	Pygocentrus_nattereri
ENSCPOG00000014027	-	100	78.276	ENSRNOG00000004777	Esf1	100	79.103	Rattus_norvegicus
ENSCPOG00000014027	-	100	80.964	ENSRBIG00000035763	ESF1	100	81.786	Rhinopithecus_bieti
ENSCPOG00000014027	-	100	81.477	ENSRROG00000032022	ESF1	100	82.181	Rhinopithecus_roxellana
ENSCPOG00000014027	-	56	34.653	YDR365C	-	73	33.072	Saccharomyces_cerevisiae
ENSCPOG00000014027	-	100	81.551	ENSSBOG00000030387	ESF1	100	81.904	Saimiri_boliviensis_boliviensis
ENSCPOG00000014027	-	100	70.987	ENSSHAG00000000449	ESF1	100	70.987	Sarcophilus_harrisii
ENSCPOG00000014027	-	77	70.270	ENSSDUG00000019460	esf1	99	70.833	Seriola_dumerili
ENSCPOG00000014027	-	69	73.484	ENSSPUG00000012635	ESF1	69	74.686	Sphenodon_punctatus
ENSCPOG00000014027	-	77	70.513	ENSSPAG00000019077	esf1	87	70.833	Stegastes_partitus
ENSCPOG00000014027	-	100	79.535	ENSSSCG00000007077	ESF1	100	80.581	Sus_scrofa
ENSCPOG00000014027	-	75	73.611	ENSTGUG00000002450	ESF1	73	73.611	Taeniopygia_guttata
ENSCPOG00000014027	-	79	69.565	ENSTRUG00000009445	esf1	99	66.667	Takifugu_rubripes
ENSCPOG00000014027	-	73	87.226	ENSTBEG00000008552	ESF1	74	87.226	Tupaia_belangeri
ENSCPOG00000014027	-	100	78.923	ENSTTRG00000005335	ESF1	100	79.742	Tursiops_truncatus
ENSCPOG00000014027	-	100	79.695	ENSUMAG00000008579	ESF1	100	79.695	Ursus_maritimus
ENSCPOG00000014027	-	100	74.113	ENSVPAG00000005291	ESF1	100	74.586	Vicugna_pacos
ENSCPOG00000014027	-	100	78.824	ENSVVUG00000014318	ESF1	93	78.941	Vulpes_vulpes
ENSCPOG00000014027	-	66	65.901	ENSXETG00000008079	esf1	100	53.712	Xenopus_tropicalis
ENSCPOG00000014027	-	76	64.865	ENSXMAG00000017651	esf1	87	65.278	Xiphophorus_maculatus