EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014034 (Gene tree)
Gene ID: 100734183
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 22574 bases
Position: chrDS562866.1:50338988-50361561
Accession: 100734183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000024479	zf-C3HC	PF07967.13	1.3e-38	1	1
ENSCPOP00000012640	zf-C3HC	PF07967.13	1.5e-38	1	1
ENSCPOP00000028580	zf-C3HC	PF07967.13	1.7e-38	1	1
ENSCPOP00000024479	Rsm1	PF08600.10	4.3e-15	1	2
ENSCPOP00000024479	Rsm1	PF08600.10	4.3e-15	2	2
ENSCPOP00000012640	Rsm1	PF08600.10	2.8e-14	1	2
ENSCPOP00000012640	Rsm1	PF08600.10	2.8e-14	2	2
ENSCPOP00000028580	Rsm1	PF08600.10	3.9e-14	1	2
ENSCPOP00000028580	Rsm1	PF08600.10	3.9e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000040918	ZC3HC1-202	1284	-	ENSCPOP00000024479	427 (aa)	-	A0A286XGD3
ENSCPOT00000048007	ZC3HC1-201	1835	XM_003475192	ENSCPOP00000028580	498 (aa)	XP_003475240	A0A286XT91
ENSCPOT00000014176	ZC3HC1-203	1437	-	ENSCPOP00000012640	478 (aa)	-	H0VQ38

Gene Model

Click here to download ENSCPOG00000014034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014034	ZC3HC1	99	85.814	ENSG00000091732	ZC3HC1	99	85.814	Homo_sapiens
ENSCPOG00000014034	ZC3HC1	94	48.466	ENSAPOG00000009078	zc3hc1	95	44.848	Acanthochromis_polyacanthus
ENSCPOG00000014034	ZC3HC1	100	84.524	ENSAMEG00000005425	ZC3HC1	100	84.921	Ailuropoda_melanoleuca
ENSCPOG00000014034	ZC3HC1	94	46.201	ENSACIG00000019513	zc3hc1	95	42.116	Amphilophus_citrinellus
ENSCPOG00000014034	ZC3HC1	94	48.457	ENSAOCG00000024310	zc3hc1	95	44.758	Amphiprion_ocellaris
ENSCPOG00000014034	ZC3HC1	94	48.457	ENSAPEG00000004907	zc3hc1	95	44.758	Amphiprion_percula
ENSCPOG00000014034	ZC3HC1	86	47.907	ENSATEG00000016898	zc3hc1	85	47.653	Anabas_testudineus
ENSCPOG00000014034	ZC3HC1	88	61.348	ENSAPLG00000003832	ZC3HC1	99	61.798	Anas_platyrhynchos
ENSCPOG00000014034	ZC3HC1	100	60.117	ENSACAG00000001638	ZC3HC1	100	60.117	Anolis_carolinensis
ENSCPOG00000014034	ZC3HC1	100	84.455	ENSANAG00000022213	ZC3HC1	100	84.455	Aotus_nancymaae
ENSCPOG00000014034	ZC3HC1	83	50.896	ENSACLG00000025033	zc3hc1	94	45.434	Astatotilapia_calliptera
ENSCPOG00000014034	ZC3HC1	93	47.003	ENSAMXG00000036792	zc3hc1	97	43.827	Astyanax_mexicanus
ENSCPOG00000014034	ZC3HC1	100	83.466	ENSBTAG00000011247	ZC3HC1	100	83.865	Bos_taurus
ENSCPOG00000014034	ZC3HC1	100	84.455	ENSCJAG00000010536	ZC3HC1	100	84.455	Callithrix_jacchus
ENSCPOG00000014034	ZC3HC1	100	84.554	ENSCAFG00000001499	-	99	84.950	Canis_familiaris
ENSCPOG00000014034	ZC3HC1	100	84.661	ENSCAFG00000031850	-	100	85.060	Canis_familiaris
ENSCPOG00000014034	ZC3HC1	100	84.263	ENSCAFG00000028735	-	100	84.661	Canis_familiaris
ENSCPOG00000014034	ZC3HC1	100	84.263	ENSCAFG00000029401	-	99	84.661	Canis_familiaris
ENSCPOG00000014034	ZC3HC1	100	84.065	ENSCAFG00020023333	-	100	84.065	Canis_lupus_dingo
ENSCPOG00000014034	ZC3HC1	100	84.462	ENSCAFG00020006829	-	100	84.861	Canis_lupus_dingo
ENSCPOG00000014034	ZC3HC1	100	76.295	ENSCHIG00000014103	ZC3HC1	100	76.693	Capra_hircus
ENSCPOG00000014034	ZC3HC1	100	83.466	ENSTSYG00000002843	ZC3HC1	100	83.865	Carlito_syrichta
ENSCPOG00000014034	ZC3HC1	90	78.194	ENSCAPG00000016300	ZC3HC1	100	78.194	Cavia_aperea
ENSCPOG00000014034	ZC3HC1	100	65.936	ENSCCAG00000020384	ZC3HC1	100	81.057	Cebus_capucinus
ENSCPOG00000014034	ZC3HC1	100	86.311	ENSCATG00000023130	ZC3HC1	100	86.311	Cercocebus_atys
ENSCPOG00000014034	ZC3HC1	100	67.000	ENSCLAG00000008260	ZC3HC1	100	65.669	Chinchilla_lanigera
ENSCPOG00000014034	ZC3HC1	73	83.333	ENSCSAG00000009881	ZC3HC1	97	83.880	Chlorocebus_sabaeus
ENSCPOG00000014034	ZC3HC1	90	81.818	ENSCHOG00000011846	ZC3HC1	99	82.483	Choloepus_hoffmanni
ENSCPOG00000014034	ZC3HC1	96	64.742	ENSCPBG00000017519	ZC3HC1	100	64.215	Chrysemys_picta_bellii
ENSCPOG00000014034	ZC3HC1	100	86.079	ENSCANG00000029091	ZC3HC1	100	86.079	Colobus_angolensis_palliatus
ENSCPOG00000014034	ZC3HC1	100	81.873	ENSCGRG00001018805	Zc3hc1	100	82.647	Cricetulus_griseus_chok1gshd
ENSCPOG00000014034	ZC3HC1	100	80.677	ENSCGRG00000017114	Zc3hc1	100	80.677	Cricetulus_griseus_crigri
ENSCPOG00000014034	ZC3HC1	96	42.829	ENSCSEG00000009284	zc3hc1	94	42.178	Cynoglossus_semilaevis
ENSCPOG00000014034	ZC3HC1	94	42.797	ENSCVAG00000011566	zc3hc1	94	42.105	Cyprinodon_variegatus
ENSCPOG00000014034	ZC3HC1	94	48.447	ENSDARG00000062651	zc3hc1	95	45.325	Danio_rerio
ENSCPOG00000014034	ZC3HC1	100	81.076	ENSDNOG00000045016	ZC3HC1	100	81.673	Dasypus_novemcinctus
ENSCPOG00000014034	ZC3HC1	100	73.108	ENSDORG00000008697	Zc3hc1	100	73.705	Dipodomys_ordii
ENSCPOG00000014034	ZC3HC1	90	82.965	ENSEASG00005008789	ZC3HC1	97	84.071	Equus_asinus_asinus
ENSCPOG00000014034	ZC3HC1	100	83.101	ENSECAG00000017886	ZC3HC1	100	83.698	Equus_caballus
ENSCPOG00000014034	ZC3HC1	84	72.222	ENSEEUG00000003123	ZC3HC1	84	73.457	Erinaceus_europaeus
ENSCPOG00000014034	ZC3HC1	94	43.522	ENSELUG00000023168	zc3hc1	94	45.070	Esox_lucius
ENSCPOG00000014034	ZC3HC1	100	85.847	ENSFCAG00000010429	ZC3HC1	100	85.847	Felis_catus
ENSCPOG00000014034	ZC3HC1	90	58.836	ENSFALG00000005006	ZC3HC1	100	59.483	Ficedula_albicollis
ENSCPOG00000014034	ZC3HC1	100	88.837	ENSFDAG00000019897	ZC3HC1	100	88.837	Fukomys_damarensis
ENSCPOG00000014034	ZC3HC1	95	46.131	ENSFHEG00000020149	zc3hc1	96	42.545	Fundulus_heteroclitus
ENSCPOG00000014034	ZC3HC1	94	43.918	ENSGMOG00000002914	zc3hc1	95	44.628	Gadus_morhua
ENSCPOG00000014034	ZC3HC1	99	60.870	ENSGALG00000008003	ZC3HC1	99	60.679	Gallus_gallus
ENSCPOG00000014034	ZC3HC1	96	43.145	ENSGAFG00000016095	zc3hc1	96	42.629	Gambusia_affinis
ENSCPOG00000014034	ZC3HC1	94	47.649	ENSGACG00000019706	zc3hc1	94	44.286	Gasterosteus_aculeatus
ENSCPOG00000014034	ZC3HC1	78	64.450	ENSGAGG00000016106	ZC3HC1	100	65.217	Gopherus_agassizii
ENSCPOG00000014034	ZC3HC1	99	85.581	ENSGGOG00000015504	ZC3HC1	99	85.581	Gorilla_gorilla
ENSCPOG00000014034	ZC3HC1	93	47.484	ENSHBUG00000008347	zc3hc1	94	43.648	Haplochromis_burtoni
ENSCPOG00000014034	ZC3HC1	100	89.535	ENSHGLG00000005085	ZC3HC1	100	89.535	Heterocephalus_glaber_female
ENSCPOG00000014034	ZC3HC1	100	89.302	ENSHGLG00100011395	ZC3HC1	100	89.302	Heterocephalus_glaber_male
ENSCPOG00000014034	ZC3HC1	95	42.644	ENSHCOG00000014309	zc3hc1	95	42.181	Hippocampus_comes
ENSCPOG00000014034	ZC3HC1	100	83.068	ENSSTOG00000023599	-	100	83.665	Ictidomys_tridecemlineatus
ENSCPOG00000014034	ZC3HC1	93	47.484	ENSKMAG00000015315	zc3hc1	88	43.918	Kryptolebias_marmoratus
ENSCPOG00000014034	ZC3HC1	94	47.305	ENSLBEG00000017325	zc3hc1	95	43.713	Labrus_bergylta
ENSCPOG00000014034	ZC3HC1	82	54.745	ENSLACG00000013032	ZC3HC1	98	53.791	Latimeria_chalumnae
ENSCPOG00000014034	ZC3HC1	99	54.518	ENSLOCG00000015963	zc3hc1	99	51.282	Lepisosteus_oculatus
ENSCPOG00000014034	ZC3HC1	100	82.609	ENSLAFG00000001292	ZC3HC1	100	83.202	Loxodonta_africana
ENSCPOG00000014034	ZC3HC1	100	86.543	ENSMFAG00000030176	ZC3HC1	100	86.543	Macaca_fascicularis
ENSCPOG00000014034	ZC3HC1	100	86.311	ENSMMUG00000006155	ZC3HC1	100	86.311	Macaca_mulatta
ENSCPOG00000014034	ZC3HC1	100	86.543	ENSMNEG00000011833	ZC3HC1	100	86.543	Macaca_nemestrina
ENSCPOG00000014034	ZC3HC1	100	86.543	ENSMLEG00000027328	ZC3HC1	100	86.543	Mandrillus_leucophaeus
ENSCPOG00000014034	ZC3HC1	96	45.000	ENSMAMG00000010691	zc3hc1	96	44.246	Mastacembelus_armatus
ENSCPOG00000014034	ZC3HC1	93	47.170	ENSMZEG00005007142	zc3hc1	94	43.443	Maylandia_zebra
ENSCPOG00000014034	ZC3HC1	98	60.983	ENSMGAG00000002977	ZC3HC1	97	61.350	Meleagris_gallopavo
ENSCPOG00000014034	ZC3HC1	82	75.422	ENSMAUG00000017032	Zc3hc1	92	75.422	Mesocricetus_auratus
ENSCPOG00000014034	ZC3HC1	100	85.615	ENSMICG00000009167	ZC3HC1	100	85.615	Microcebus_murinus
ENSCPOG00000014034	ZC3HC1	100	81.673	ENSMOCG00000015239	Zc3hc1	100	82.353	Microtus_ochrogaster
ENSCPOG00000014034	ZC3HC1	84	49.147	ENSMMOG00000002204	zc3hc1	99	43.421	Mola_mola
ENSCPOG00000014034	ZC3HC1	100	60.000	ENSMODG00000014630	ZC3HC1	100	60.577	Monodelphis_domestica
ENSCPOG00000014034	ZC3HC1	94	47.059	ENSMALG00000014447	zc3hc1	96	43.625	Monopterus_albus
ENSCPOG00000014034	ZC3HC1	100	81.671	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	81.671	Mus_caroli
ENSCPOG00000014034	ZC3HC1	100	80.742	ENSMUSG00000039130	Zc3hc1	100	80.742	Mus_musculus
ENSCPOG00000014034	ZC3HC1	100	74.710	MGP_PahariEiJ_G0021941	Zc3hc1	100	75.299	Mus_pahari
ENSCPOG00000014034	ZC3HC1	100	80.974	MGP_SPRETEiJ_G0029183	Zc3hc1	100	80.974	Mus_spretus
ENSCPOG00000014034	ZC3HC1	100	82.988	ENSMPUG00000005297	ZC3HC1	95	84.310	Mustela_putorius_furo
ENSCPOG00000014034	ZC3HC1	100	82.376	ENSMLUG00000000063	-	100	82.970	Myotis_lucifugus
ENSCPOG00000014034	ZC3HC1	65	77.918	ENSMLUG00000029228	-	99	75.953	Myotis_lucifugus
ENSCPOG00000014034	ZC3HC1	100	81.019	ENSNGAG00000019014	Zc3hc1	100	81.019	Nannospalax_galili
ENSCPOG00000014034	ZC3HC1	93	47.170	ENSNBRG00000004577	zc3hc1	94	43.121	Neolamprologus_brichardi
ENSCPOG00000014034	ZC3HC1	99	85.588	ENSNLEG00000012698	ZC3HC1	99	84.651	Nomascus_leucogenys
ENSCPOG00000014034	ZC3HC1	97	77.341	ENSMEUG00000011023	ZC3HC1	98	74.338	Notamacropus_eugenii
ENSCPOG00000014034	ZC3HC1	75	82.946	ENSOPRG00000007867	-	68	82.946	Ochotona_princeps
ENSCPOG00000014034	ZC3HC1	100	90.400	ENSODEG00000014604	ZC3HC1	100	90.400	Octodon_degus
ENSCPOG00000014034	ZC3HC1	93	47.799	ENSONIG00000011644	zc3hc1	94	43.852	Oreochromis_niloticus
ENSCPOG00000014034	ZC3HC1	90	63.578	ENSOANG00000011460	ZC3HC1	100	64.224	Ornithorhynchus_anatinus
ENSCPOG00000014034	ZC3HC1	100	80.198	ENSOCUG00000017137	ZC3HC1	100	80.792	Oryctolagus_cuniculus
ENSCPOG00000014034	ZC3HC1	95	47.561	ENSORLG00000014409	zc3hc1	95	43.058	Oryzias_latipes
ENSCPOG00000014034	ZC3HC1	95	47.866	ENSORLG00020015874	zc3hc1	95	43.347	Oryzias_latipes_hni
ENSCPOG00000014034	ZC3HC1	96	43.813	ENSORLG00015014641	zc3hc1	95	43.058	Oryzias_latipes_hsok
ENSCPOG00000014034	ZC3HC1	95	49.235	ENSOMEG00000020604	zc3hc1	96	44.399	Oryzias_melastigma
ENSCPOG00000014034	ZC3HC1	95	48.930	ENSOMEG00000000215	zc3hc1	96	44.512	Oryzias_melastigma
ENSCPOG00000014034	ZC3HC1	100	77.888	ENSOGAG00000026193	ZC3HC1	100	78.486	Otolemur_garnettii
ENSCPOG00000014034	ZC3HC1	100	83.168	ENSOARG00000004907	ZC3HC1	99	83.564	Ovis_aries
ENSCPOG00000014034	ZC3HC1	99	85.814	ENSPPAG00000043172	ZC3HC1	99	85.814	Pan_paniscus
ENSCPOG00000014034	ZC3HC1	100	85.151	ENSPPRG00000001004	ZC3HC1	100	85.151	Panthera_pardus
ENSCPOG00000014034	ZC3HC1	100	85.615	ENSPTIG00000007823	ZC3HC1	100	85.615	Panthera_tigris_altaica
ENSCPOG00000014034	ZC3HC1	99	85.581	ENSPTRG00000019685	ZC3HC1	99	85.581	Pan_troglodytes
ENSCPOG00000014034	ZC3HC1	100	86.311	ENSPANG00000014229	ZC3HC1	100	86.311	Papio_anubis
ENSCPOG00000014034	ZC3HC1	94	49.842	ENSPKIG00000007172	zc3hc1	95	48.033	Paramormyrops_kingsleyae
ENSCPOG00000014034	ZC3HC1	94	65.472	ENSPSIG00000016646	ZC3HC1	100	58.984	Pelodiscus_sinensis
ENSCPOG00000014034	ZC3HC1	97	42.245	ENSPMGG00000003548	zc3hc1	96	45.498	Periophthalmus_magnuspinnatus
ENSCPOG00000014034	ZC3HC1	100	83.235	ENSPEMG00000000514	Zc3hc1	100	81.474	Peromyscus_maniculatus_bairdii
ENSCPOG00000014034	ZC3HC1	99	72.271	ENSPCIG00000020619	ZC3HC1	100	73.779	Phascolarctos_cinereus
ENSCPOG00000014034	ZC3HC1	95	46.061	ENSPFOG00000003466	zc3hc1	96	42.200	Poecilia_formosa
ENSCPOG00000014034	ZC3HC1	95	45.872	ENSPLAG00000022211	zc3hc1	96	42.254	Poecilia_latipinna
ENSCPOG00000014034	ZC3HC1	95	46.177	ENSPMEG00000001458	zc3hc1	96	42.254	Poecilia_mexicana
ENSCPOG00000014034	ZC3HC1	95	46.177	ENSPREG00000004004	zc3hc1	96	42.715	Poecilia_reticulata
ENSCPOG00000014034	ZC3HC1	99	76.541	ENSPPYG00000017998	ZC3HC1	99	77.137	Pongo_abelii
ENSCPOG00000014034	ZC3HC1	92	79.783	ENSPCAG00000001182	ZC3HC1	100	80.217	Procavia_capensis
ENSCPOG00000014034	ZC3HC1	100	85.847	ENSPCOG00000017354	ZC3HC1	100	85.847	Propithecus_coquereli
ENSCPOG00000014034	ZC3HC1	100	78.486	ENSPVAG00000003195	ZC3HC1	100	79.084	Pteropus_vampyrus
ENSCPOG00000014034	ZC3HC1	93	47.170	ENSPNYG00000020692	zc3hc1	94	43.443	Pundamilia_nyererei
ENSCPOG00000014034	ZC3HC1	94	45.415	ENSPNAG00000020746	zc3hc1	95	44.979	Pygocentrus_nattereri
ENSCPOG00000014034	ZC3HC1	100	79.523	ENSRNOG00000010154	Zc3hc1	100	80.119	Rattus_norvegicus
ENSCPOG00000014034	ZC3HC1	89	86.649	ENSRBIG00000029409	ZC3HC1	100	86.649	Rhinopithecus_bieti
ENSCPOG00000014034	ZC3HC1	100	86.079	ENSRROG00000041831	ZC3HC1	100	86.079	Rhinopithecus_roxellana
ENSCPOG00000014034	ZC3HC1	100	67.928	ENSSBOG00000032787	ZC3HC1	96	82.500	Saimiri_boliviensis_boliviensis
ENSCPOG00000014034	ZC3HC1	91	77.888	ENSSHAG00000002529	ZC3HC1	100	73.978	Sarcophilus_harrisii
ENSCPOG00000014034	ZC3HC1	94	49.838	ENSSFOG00015003667	zc3hc1	91	48.247	Scleropages_formosus
ENSCPOG00000014034	ZC3HC1	96	44.467	ENSSMAG00000000647	zc3hc1	86	44.910	Scophthalmus_maximus
ENSCPOG00000014034	ZC3HC1	95	46.784	ENSSDUG00000004241	zc3hc1	94	44.088	Seriola_dumerili
ENSCPOG00000014034	ZC3HC1	95	47.059	ENSSLDG00000025056	zc3hc1	94	44.200	Seriola_lalandi_dorsalis
ENSCPOG00000014034	ZC3HC1	99	74.052	ENSSARG00000012013	ZC3HC1	99	74.651	Sorex_araneus
ENSCPOG00000014034	ZC3HC1	88	55.684	ENSSPUG00000000778	ZC3HC1	85	56.148	Sphenodon_punctatus
ENSCPOG00000014034	ZC3HC1	94	49.847	ENSSPAG00000020041	zc3hc1	95	46.559	Stegastes_partitus
ENSCPOG00000014034	ZC3HC1	100	84.455	ENSSSCG00000016565	ZC3HC1	100	84.455	Sus_scrofa
ENSCPOG00000014034	ZC3HC1	94	44.932	ENSTRUG00000020077	zc3hc1	95	42.116	Takifugu_rubripes
ENSCPOG00000014034	ZC3HC1	94	44.595	ENSTNIG00000007585	zc3hc1	99	43.182	Tetraodon_nigroviridis
ENSCPOG00000014034	ZC3HC1	99	73.453	ENSTBEG00000005216	ZC3HC1	99	74.052	Tupaia_belangeri
ENSCPOG00000014034	ZC3HC1	96	83.958	ENSTTRG00000008458	ZC3HC1	100	84.583	Tursiops_truncatus
ENSCPOG00000014034	ZC3HC1	100	84.661	ENSUAMG00000020249	ZC3HC1	100	85.060	Ursus_americanus
ENSCPOG00000014034	ZC3HC1	100	84.263	ENSUMAG00000009268	ZC3HC1	100	84.661	Ursus_maritimus
ENSCPOG00000014034	ZC3HC1	91	80.588	ENSVPAG00000010846	ZC3HC1	77	80.588	Vicugna_pacos
ENSCPOG00000014034	ZC3HC1	100	83.610	ENSVVUG00000012386	ZC3HC1	100	84.025	Vulpes_vulpes
ENSCPOG00000014034	ZC3HC1	95	50.000	ENSXETG00000033900	zc3hc1	95	50.000	Xenopus_tropicalis
ENSCPOG00000014034	ZC3HC1	96	42.799	ENSXCOG00000013570	zc3hc1	97	44.388	Xiphophorus_couchianus
ENSCPOG00000014034	ZC3HC1	85	49.648	ENSXMAG00000010979	zc3hc1	95	44.469	Xiphophorus_maculatus