EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014036 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 63251 bases
Position: chrDS562880.1:18007725-18070975
Accession: 100713290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000012641	RRM_1	PF00076.22	1.5e-33	1	3
ENSCPOP00000012641	RRM_1	PF00076.22	1.5e-33	2	3
ENSCPOP00000012641	RRM_1	PF00076.22	1.5e-33	3	3
ENSCPOP00000021991	RRM_1	PF00076.22	1.5e-33	1	3
ENSCPOP00000021991	RRM_1	PF00076.22	1.5e-33	2	3
ENSCPOP00000021991	RRM_1	PF00076.22	1.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000044518	SPEN-201	10371	-	ENSCPOP00000021991	3456 (aa)	-	A0A286X982
ENSCPOT00000014178	SPEN-202	10332	XM_003471174	ENSCPOP00000012641	3443 (aa)	XP_003471222	H0VQ39

Gene Model

Click here to download ENSCPOG00000014036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014036	SPEN	100	82.155	ENSG00000065526	SPEN	99	97.980	Homo_sapiens
ENSCPOG00000014036	SPEN	78	73.077	ENSAPOG00000011411	si:ch1073-335m2.2	89	73.077	Acanthochromis_polyacanthus
ENSCPOG00000014036	SPEN	87	78.000	ENSAPOG00000009853	-	80	72.803	Acanthochromis_polyacanthus
ENSCPOG00000014036	SPEN	100	80.647	ENSAMEG00000011817	SPEN	99	80.839	Ailuropoda_melanoleuca
ENSCPOG00000014036	SPEN	87	78.000	ENSAOCG00000014505	-	97	45.036	Amphiprion_ocellaris
ENSCPOG00000014036	SPEN	67	78.195	ENSAOCG00000008077	si:ch1073-335m2.2	82	78.195	Amphiprion_ocellaris
ENSCPOG00000014036	SPEN	87	78.000	ENSAPEG00000010288	-	97	45.106	Amphiprion_percula
ENSCPOG00000014036	SPEN	84	83.432	ENSAPEG00000013515	si:ch1073-335m2.2	88	83.432	Amphiprion_percula
ENSCPOG00000014036	SPEN	96	79.333	ENSATEG00000005627	-	89	47.781	Anabas_testudineus
ENSCPOG00000014036	SPEN	92	79.781	ENSATEG00000007674	si:ch1073-335m2.2	70	79.781	Anabas_testudineus
ENSCPOG00000014036	SPEN	100	65.678	ENSAPLG00000012618	SPEN	99	65.202	Anas_platyrhynchos
ENSCPOG00000014036	SPEN	100	57.586	ENSACAG00000013761	SPEN	99	58.223	Anolis_carolinensis
ENSCPOG00000014036	SPEN	100	81.649	ENSANAG00000034428	SPEN	99	81.402	Aotus_nancymaae
ENSCPOG00000014036	SPEN	96	45.761	ENSACLG00000016922	-	94	74.163	Astatotilapia_calliptera
ENSCPOG00000014036	SPEN	70	76.020	ENSACLG00000021433	si:ch1073-335m2.2	77	76.020	Astatotilapia_calliptera
ENSCPOG00000014036	SPEN	90	80.132	ENSAMXG00000012485	spen	97	47.130	Astyanax_mexicanus
ENSCPOG00000014036	SPEN	100	80.735	ENSBTAG00000018729	SPEN	99	80.269	Bos_taurus
ENSCPOG00000014036	SPEN	100	81.207	ENSCJAG00000008527	SPEN	99	80.989	Callithrix_jacchus
ENSCPOG00000014036	SPEN	87	78.075	ENSCAFG00000016132	-	96	88.989	Canis_familiaris
ENSCPOG00000014036	SPEN	100	80.850	ENSCHIG00000025070	SPEN	99	80.549	Capra_hircus
ENSCPOG00000014036	SPEN	92	79.696	ENSTSYG00000036016	SPEN	99	79.320	Carlito_syrichta
ENSCPOG00000014036	SPEN	100	99.021	ENSCAPG00000013803	SPEN	100	99.021	Cavia_aperea
ENSCPOG00000014036	SPEN	100	76.908	ENSCCAG00000020258	SPEN	99	78.233	Cebus_capucinus
ENSCPOG00000014036	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.074	Cercocebus_atys
ENSCPOG00000014036	SPEN	100	86.719	ENSCLAG00000002018	SPEN	100	86.550	Chinchilla_lanigera
ENSCPOG00000014036	SPEN	100	82.052	ENSCSAG00000000841	SPEN	99	81.614	Chlorocebus_sabaeus
ENSCPOG00000014036	SPEN	100	66.308	ENSCPBG00000010477	SPEN	99	66.097	Chrysemys_picta_bellii
ENSCPOG00000014036	SPEN	100	80.865	ENSCANG00000034547	SPEN	99	80.372	Colobus_angolensis_palliatus
ENSCPOG00000014036	SPEN	99	76.416	ENSCGRG00001007725	Spen	99	76.340	Cricetulus_griseus_chok1gshd
ENSCPOG00000014036	SPEN	99	75.911	ENSCGRG00000010581	Spen	100	75.425	Cricetulus_griseus_crigri
ENSCPOG00000014036	SPEN	96	81.333	ENSCSEG00000003915	-	94	50.377	Cynoglossus_semilaevis
ENSCPOG00000014036	SPEN	100	41.407	ENSCVAG00000016346	-	94	44.801	Cyprinodon_variegatus
ENSCPOG00000014036	SPEN	62	62.217	ENSCVAG00000009075	si:ch1073-335m2.2	84	73.913	Cyprinodon_variegatus
ENSCPOG00000014036	SPEN	96	46.477	ENSDARG00000074245	spen	79	85.981	Danio_rerio
ENSCPOG00000014036	SPEN	74	61.446	ENSDARG00000074332	si:ch1073-335m2.2	76	70.335	Danio_rerio
ENSCPOG00000014036	SPEN	100	80.810	ENSDNOG00000041948	SPEN	99	80.706	Dasypus_novemcinctus
ENSCPOG00000014036	SPEN	100	76.175	ENSDORG00000023909	Spen	100	75.458	Dipodomys_ordii
ENSCPOG00000014036	SPEN	70	95.816	ENSETEG00000016692	-	66	95.816	Echinops_telfairi
ENSCPOG00000014036	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCPOG00000014036	SPEN	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCPOG00000014036	SPEN	74	97.674	ENSEEUG00000010255	SPEN	75	97.674	Erinaceus_europaeus
ENSCPOG00000014036	SPEN	72	83.529	ENSELUG00000007726	si:ch1073-335m2.2	79	83.529	Esox_lucius
ENSCPOG00000014036	SPEN	89	61.623	ENSFALG00000003551	SPEN	100	61.444	Ficedula_albicollis
ENSCPOG00000014036	SPEN	99	84.938	ENSFDAG00000010212	SPEN	100	84.499	Fukomys_damarensis
ENSCPOG00000014036	SPEN	84	72.464	ENSFHEG00000004544	si:ch1073-335m2.2	57	72.947	Fundulus_heteroclitus
ENSCPOG00000014036	SPEN	80	76.159	ENSGMOG00000008397	-	79	76.159	Gadus_morhua
ENSCPOG00000014036	SPEN	100	65.720	ENSGALG00000036932	SPEN	98	65.527	Gallus_gallus
ENSCPOG00000014036	SPEN	100	41.465	ENSGAFG00000015819	-	80	71.967	Gambusia_affinis
ENSCPOG00000014036	SPEN	96	46.749	ENSGACG00000005341	-	91	48.284	Gasterosteus_aculeatus
ENSCPOG00000014036	SPEN	85	83.951	ENSGACG00000001176	si:ch1073-335m2.2	86	81.437	Gasterosteus_aculeatus
ENSCPOG00000014036	SPEN	99	96.488	ENSGAGG00000020785	SPEN	99	66.345	Gopherus_agassizii
ENSCPOG00000014036	SPEN	100	81.953	ENSGGOG00000012041	SPEN	99	81.569	Gorilla_gorilla
ENSCPOG00000014036	SPEN	70	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	80	76.020	Haplochromis_burtoni
ENSCPOG00000014036	SPEN	96	45.595	ENSHBUG00000020626	-	94	75.120	Haplochromis_burtoni
ENSCPOG00000014036	SPEN	100	80.970	ENSHGLG00000019259	SPEN	99	80.393	Heterocephalus_glaber_female
ENSCPOG00000014036	SPEN	89	88.158	ENSHGLG00100019294	SPEN	95	88.158	Heterocephalus_glaber_male
ENSCPOG00000014036	SPEN	66	81.746	ENSHCOG00000006004	si:ch1073-335m2.2	71	81.746	Hippocampus_comes
ENSCPOG00000014036	SPEN	80	66.986	ENSIPUG00000018212	si:ch1073-335m2.2	86	66.986	Ictalurus_punctatus
ENSCPOG00000014036	SPEN	99	79.605	ENSIPUG00000021668	spen	88	47.228	Ictalurus_punctatus
ENSCPOG00000014036	SPEN	99	81.876	ENSSTOG00000021428	SPEN	100	81.770	Ictidomys_tridecemlineatus
ENSCPOG00000014036	SPEN	100	79.136	ENSJJAG00000010882	Spen	99	79.087	Jaculus_jaculus
ENSCPOG00000014036	SPEN	89	72.906	ENSKMAG00000021725	si:ch1073-335m2.2	85	72.906	Kryptolebias_marmoratus
ENSCPOG00000014036	SPEN	96	44.339	ENSKMAG00000003882	-	68	54.513	Kryptolebias_marmoratus
ENSCPOG00000014036	SPEN	75	76.796	ENSLBEG00000020855	si:ch1073-335m2.2	79	76.796	Labrus_bergylta
ENSCPOG00000014036	SPEN	83	37.731	ENSLBEG00000019129	-	89	39.169	Labrus_bergylta
ENSCPOG00000014036	SPEN	95	95.652	ENSLACG00000003258	SPEN	72	95.652	Latimeria_chalumnae
ENSCPOG00000014036	SPEN	97	53.401	ENSLOCG00000007896	si:ch1073-335m2.2	98	53.826	Lepisosteus_oculatus
ENSCPOG00000014036	SPEN	100	79.563	ENSLAFG00000004524	SPEN	99	80.273	Loxodonta_africana
ENSCPOG00000014036	SPEN	100	81.816	ENSMFAG00000041974	SPEN	99	81.542	Macaca_fascicularis
ENSCPOG00000014036	SPEN	100	81.950	ENSMMUG00000008026	SPEN	99	81.611	Macaca_mulatta
ENSCPOG00000014036	SPEN	100	81.843	ENSMNEG00000042402	SPEN	99	81.570	Macaca_nemestrina
ENSCPOG00000014036	SPEN	100	82.171	ENSMLEG00000039293	SPEN	99	81.706	Mandrillus_leucophaeus
ENSCPOG00000014036	SPEN	80	69.406	ENSMAMG00000023870	si:ch1073-335m2.2	90	78.142	Mastacembelus_armatus
ENSCPOG00000014036	SPEN	87	43.068	ENSMZEG00005021491	-	93	74.163	Maylandia_zebra
ENSCPOG00000014036	SPEN	70	76.020	ENSMZEG00005011762	si:ch1073-335m2.2	77	76.020	Maylandia_zebra
ENSCPOG00000014036	SPEN	100	74.808	ENSMAUG00000008318	Spen	99	74.685	Mesocricetus_auratus
ENSCPOG00000014036	SPEN	100	82.377	ENSMICG00000030994	SPEN	99	82.270	Microcebus_murinus
ENSCPOG00000014036	SPEN	100	76.742	ENSMOCG00000016083	Spen	99	76.488	Microtus_ochrogaster
ENSCPOG00000014036	SPEN	100	65.199	ENSMODG00000003411	SPEN	99	64.904	Monodelphis_domestica
ENSCPOG00000014036	SPEN	96	78.667	ENSMALG00000008625	-	97	45.104	Monopterus_albus
ENSCPOG00000014036	SPEN	100	75.736	MGP_CAROLIEiJ_G0026745	Spen	99	75.358	Mus_caroli
ENSCPOG00000014036	SPEN	100	75.357	ENSMUSG00000040761	Spen	99	75.165	Mus_musculus
ENSCPOG00000014036	SPEN	100	74.986	MGP_PahariEiJ_G0029076	Spen	99	74.821	Mus_pahari
ENSCPOG00000014036	SPEN	100	75.631	MGP_SPRETEiJ_G0027724	Spen	99	75.357	Mus_spretus
ENSCPOG00000014036	SPEN	99	80.381	ENSMPUG00000016317	SPEN	100	80.646	Mustela_putorius_furo
ENSCPOG00000014036	SPEN	94	79.636	ENSMLUG00000010144	SPEN	98	94.828	Myotis_lucifugus
ENSCPOG00000014036	SPEN	99	82.930	ENSNGAG00000000641	Spen	99	82.982	Nannospalax_galili
ENSCPOG00000014036	SPEN	64	76.020	ENSNBRG00000005733	si:ch1073-335m2.2	72	76.020	Neolamprologus_brichardi
ENSCPOG00000014036	SPEN	82	39.746	ENSNBRG00000022090	-	96	39.756	Neolamprologus_brichardi
ENSCPOG00000014036	SPEN	100	81.816	ENSNLEG00000007652	SPEN	99	81.433	Nomascus_leucogenys
ENSCPOG00000014036	SPEN	91	92.708	ENSMEUG00000002422	SPEN	91	92.708	Notamacropus_eugenii
ENSCPOG00000014036	SPEN	93	86.147	ENSOPRG00000015800	SPEN	93	86.147	Ochotona_princeps
ENSCPOG00000014036	SPEN	100	86.526	ENSODEG00000016644	SPEN	99	86.357	Octodon_degus
ENSCPOG00000014036	SPEN	96	47.277	ENSONIG00000006573	-	94	79.732	Oreochromis_niloticus
ENSCPOG00000014036	SPEN	100	77.474	ENSOCUG00000010840	SPEN	99	77.141	Oryctolagus_cuniculus
ENSCPOG00000014036	SPEN	70	81.657	ENSORLG00000018414	si:ch1073-335m2.2	51	81.657	Oryzias_latipes
ENSCPOG00000014036	SPEN	69	81.657	ENSORLG00020009351	si:ch1073-335m2.2	83	81.657	Oryzias_latipes_hni
ENSCPOG00000014036	SPEN	86	77.665	ENSORLG00015022085	-	68	77.665	Oryzias_latipes_hsok
ENSCPOG00000014036	SPEN	69	81.065	ENSORLG00015005537	si:ch1073-335m2.2	78	67.290	Oryzias_latipes_hsok
ENSCPOG00000014036	SPEN	77	83.908	ENSOMEG00000007639	-	77	83.908	Oryzias_melastigma
ENSCPOG00000014036	SPEN	71	67.105	ENSOMEG00000004509	si:ch1073-335m2.2	79	70.244	Oryzias_melastigma
ENSCPOG00000014036	SPEN	100	81.930	ENSOGAG00000025110	SPEN	99	81.574	Otolemur_garnettii
ENSCPOG00000014036	SPEN	100	80.669	ENSOARG00000008477	SPEN	99	80.395	Ovis_aries
ENSCPOG00000014036	SPEN	100	82.072	ENSPPAG00000035690	SPEN	100	81.634	Pan_paniscus
ENSCPOG00000014036	SPEN	100	82.045	ENSPTRG00000000210	SPEN	99	81.606	Pan_troglodytes
ENSCPOG00000014036	SPEN	100	80.926	ENSPANG00000006293	SPEN	99	80.460	Papio_anubis
ENSCPOG00000014036	SPEN	100	47.864	ENSPKIG00000010492	si:ch1073-335m2.2	99	47.538	Paramormyrops_kingsleyae
ENSCPOG00000014036	SPEN	70	85.000	ENSPKIG00000002617	SPEN	80	78.750	Paramormyrops_kingsleyae
ENSCPOG00000014036	SPEN	100	64.494	ENSPSIG00000008026	SPEN	99	64.176	Pelodiscus_sinensis
ENSCPOG00000014036	SPEN	100	76.776	ENSPEMG00000022997	Spen	100	76.617	Peromyscus_maniculatus_bairdii
ENSCPOG00000014036	SPEN	68	75.124	ENSPFOG00000017986	si:ch1073-335m2.2	71	75.124	Poecilia_formosa
ENSCPOG00000014036	SPEN	68	75.124	ENSPLAG00000016625	si:ch1073-335m2.2	71	75.124	Poecilia_latipinna
ENSCPOG00000014036	SPEN	61	75.124	ENSPMEG00000002674	si:ch1073-335m2.2	50	75.124	Poecilia_mexicana
ENSCPOG00000014036	SPEN	96	44.991	ENSPMEG00000006764	-	80	71.429	Poecilia_mexicana
ENSCPOG00000014036	SPEN	96	44.800	ENSPREG00000010399	-	80	71.429	Poecilia_reticulata
ENSCPOG00000014036	SPEN	75	84.615	ENSPREG00000005357	si:ch1073-335m2.2	79	84.615	Poecilia_reticulata
ENSCPOG00000014036	SPEN	100	82.282	ENSPPYG00000001834	SPEN	99	81.925	Pongo_abelii
ENSCPOG00000014036	SPEN	89	90.780	ENSPCAG00000009543	SPEN	92	86.068	Procavia_capensis
ENSCPOG00000014036	SPEN	100	81.209	ENSPCOG00000021735	SPEN	99	80.989	Propithecus_coquereli
ENSCPOG00000014036	SPEN	83	91.123	ENSPVAG00000013794	SPEN	83	91.176	Pteropus_vampyrus
ENSCPOG00000014036	SPEN	70	76.020	ENSPNYG00000009042	si:ch1073-335m2.2	82	76.020	Pundamilia_nyererei
ENSCPOG00000014036	SPEN	96	45.688	ENSPNYG00000012379	-	93	75.120	Pundamilia_nyererei
ENSCPOG00000014036	SPEN	93	70.000	ENSPNAG00000011452	si:ch1073-335m2.2	72	70.000	Pygocentrus_nattereri
ENSCPOG00000014036	SPEN	100	75.887	ENSRNOG00000033556	Spen	99	75.990	Rattus_norvegicus
ENSCPOG00000014036	SPEN	100	82.106	ENSRBIG00000039654	SPEN	100	81.628	Rhinopithecus_bieti
ENSCPOG00000014036	SPEN	100	81.878	ENSRROG00000035686	SPEN	100	81.262	Rhinopithecus_roxellana
ENSCPOG00000014036	SPEN	100	79.361	ENSSBOG00000028770	SPEN	99	89.091	Saimiri_boliviensis_boliviensis
ENSCPOG00000014036	SPEN	100	66.065	ENSSHAG00000004960	SPEN	98	93.282	Sarcophilus_harrisii
ENSCPOG00000014036	SPEN	85	83.158	ENSSFOG00015010267	si:ch1073-335m2.2	82	83.158	Scleropages_formosus
ENSCPOG00000014036	SPEN	83	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	83	65.741	Scleropages_formosus
ENSCPOG00000014036	SPEN	96	78.667	ENSSMAG00000008996	-	89	48.169	Scophthalmus_maximus
ENSCPOG00000014036	SPEN	80	72.596	ENSSMAG00000000125	si:ch1073-335m2.2	84	72.596	Scophthalmus_maximus
ENSCPOG00000014036	SPEN	92	82.514	ENSSDUG00000003476	-	80	73.109	Seriola_dumerili
ENSCPOG00000014036	SPEN	90	74.129	ENSSDUG00000008416	si:ch1073-335m2.2	90	74.129	Seriola_dumerili
ENSCPOG00000014036	SPEN	54	72.596	ENSSLDG00000023347	si:ch1073-335m2.2	71	72.596	Seriola_lalandi_dorsalis
ENSCPOG00000014036	SPEN	87	79.333	ENSSLDG00000012950	-	80	73.109	Seriola_lalandi_dorsalis
ENSCPOG00000014036	SPEN	89	61.494	ENSSPUG00000001866	-	100	61.313	Sphenodon_punctatus
ENSCPOG00000014036	SPEN	89	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	89	84.024	Stegastes_partitus
ENSCPOG00000014036	SPEN	96	78.000	ENSSPAG00000006014	-	80	72.689	Stegastes_partitus
ENSCPOG00000014036	SPEN	85	80.154	ENSSSCG00000034484	SPEN	99	79.962	Sus_scrofa
ENSCPOG00000014036	SPEN	95	76.667	ENSTRUG00000024350	-	86	47.020	Takifugu_rubripes
ENSCPOG00000014036	SPEN	60	82.249	ENSTRUG00000021008	si:ch1073-335m2.2	70	82.249	Takifugu_rubripes
ENSCPOG00000014036	SPEN	96	74.968	ENSTNIG00000010907	-	93	75.223	Tetraodon_nigroviridis
ENSCPOG00000014036	SPEN	75	99.301	ENSTBEG00000003628	SPEN	75	99.301	Tupaia_belangeri
ENSCPOG00000014036	SPEN	83	94.884	ENSTTRG00000015704	SPEN	79	94.787	Tursiops_truncatus
ENSCPOG00000014036	SPEN	100	80.842	ENSUAMG00000009600	SPEN	99	80.978	Ursus_americanus
ENSCPOG00000014036	SPEN	100	79.749	ENSUMAG00000021641	SPEN	99	79.967	Ursus_maritimus
ENSCPOG00000014036	SPEN	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCPOG00000014036	SPEN	96	54.785	ENSXETG00000023114	SPEN	96	53.852	Xenopus_tropicalis
ENSCPOG00000014036	SPEN	74	82.456	ENSXCOG00000004516	si:ch1073-335m2.2	77	82.456	Xiphophorus_couchianus
ENSCPOG00000014036	SPEN	96	44.651	ENSXMAG00000021384	-	80	69.328	Xiphophorus_maculatus