EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014251 (Gene tree)
Gene ID: 100717392
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 71848 bases
Position: chrDS562867.1:35533007-35604854
Accession: 100717392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021373	PIN_4	PF13638.6	1.3e-26	1	1
ENSCPOP00000012840	PIN_4	PF13638.6	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000014393	SWT1-201	4080	XM_013157956	ENSCPOP00000012840	830 (aa)	XP_013013410	H0VQL3
ENSCPOT00000043994	SWT1-202	3999	XM_013157955	ENSCPOP00000021373	803 (aa)	XP_013013409	A0A286X7H5

Gene Model

Click here to download ENSCPOG00000014251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014251	SWT1	100	74.763	ENSG00000116668	SWT1	93	74.763	Homo_sapiens
ENSCPOG00000014251	SWT1	62	35.206	ENSAPOG00000014897	-	53	34.831	Acanthochromis_polyacanthus
ENSCPOG00000014251	SWT1	100	75.149	ENSAMEG00000013585	SWT1	93	75.149	Ailuropoda_melanoleuca
ENSCPOG00000014251	SWT1	62	34.644	ENSAOCG00000013932	swt1	53	34.264	Amphiprion_ocellaris
ENSCPOG00000014251	SWT1	62	34.566	ENSAPEG00000009613	-	53	34.566	Amphiprion_percula
ENSCPOG00000014251	SWT1	75	33.385	ENSATEG00000018946	swt1	62	33.385	Anabas_testudineus
ENSCPOG00000014251	SWT1	67	53.420	ENSAPLG00000008607	SWT1	73	53.420	Anas_platyrhynchos
ENSCPOG00000014251	SWT1	67	46.995	ENSACAG00000002276	SWT1	63	46.995	Anolis_carolinensis
ENSCPOG00000014251	SWT1	100	74.408	ENSANAG00000027068	SWT1	93	74.675	Aotus_nancymaae
ENSCPOG00000014251	SWT1	71	31.137	ENSACLG00000009742	swt1	69	32.513	Astatotilapia_calliptera
ENSCPOG00000014251	SWT1	67	39.305	ENSAMXG00000010971	swt1	55	39.305	Astyanax_mexicanus
ENSCPOG00000014251	SWT1	76	74.478	ENSBTAG00000004492	SWT1	99	75.168	Bos_taurus
ENSCPOG00000014251	SWT1	100	72.899	ENSCJAG00000005544	SWT1	93	73.223	Callithrix_jacchus
ENSCPOG00000014251	SWT1	100	74.880	ENSCAFG00000013543	SWT1	96	74.762	Canis_familiaris
ENSCPOG00000014251	SWT1	100	72.845	ENSCAFG00020015648	SWT1	92	75.445	Canis_lupus_dingo
ENSCPOG00000014251	SWT1	94	78.628	ENSCHIG00000023511	SWT1	89	83.365	Capra_hircus
ENSCPOG00000014251	SWT1	100	75.711	ENSTSYG00000010470	SWT1	93	75.829	Carlito_syrichta
ENSCPOG00000014251	SWT1	100	75.237	ENSCCAG00000033926	SWT1	93	75.237	Cebus_capucinus
ENSCPOG00000014251	SWT1	100	75.325	ENSCATG00000042210	SWT1	89	83.270	Cercocebus_atys
ENSCPOG00000014251	SWT1	100	87.530	ENSCLAG00000013959	SWT1	94	87.530	Chinchilla_lanigera
ENSCPOG00000014251	SWT1	100	74.616	ENSCSAG00000012895	SWT1	93	74.616	Chlorocebus_sabaeus
ENSCPOG00000014251	SWT1	64	88.199	ENSCHOG00000002211	-	62	88.199	Choloepus_hoffmanni
ENSCPOG00000014251	SWT1	66	56.215	ENSCPBG00000015691	SWT1	91	45.238	Chrysemys_picta_bellii
ENSCPOG00000014251	SWT1	100	74.645	ENSCANG00000032207	SWT1	89	82.600	Colobus_angolensis_palliatus
ENSCPOG00000014251	SWT1	100	72.662	ENSCGRG00001022955	Swt1	93	71.617	Cricetulus_griseus_chok1gshd
ENSCPOG00000014251	SWT1	100	72.662	ENSCGRG00000010224	Swt1	93	73.293	Cricetulus_griseus_crigri
ENSCPOG00000014251	SWT1	63	34.312	ENSCSEG00000017352	swt1	68	35.240	Cynoglossus_semilaevis
ENSCPOG00000014251	SWT1	63	39.155	ENSDARG00000094010	swt1	51	39.155	Danio_rerio
ENSCPOG00000014251	SWT1	97	71.014	ENSDNOG00000005254	SWT1	100	71.014	Dasypus_novemcinctus
ENSCPOG00000014251	SWT1	100	74.257	ENSDORG00000010531	Swt1	93	74.257	Dipodomys_ordii
ENSCPOG00000014251	SWT1	92	74.613	ENSEASG00005005530	SWT1	97	74.742	Equus_asinus_asinus
ENSCPOG00000014251	SWT1	95	74.482	ENSECAG00000012085	SWT1	91	74.482	Equus_caballus
ENSCPOG00000014251	SWT1	81	64.384	ENSEEUG00000003664	SWT1	78	64.234	Erinaceus_europaeus
ENSCPOG00000014251	SWT1	63	35.675	ENSELUG00000020565	swt1	52	35.490	Esox_lucius
ENSCPOG00000014251	SWT1	100	75.534	ENSFCAG00000011286	SWT1	93	75.534	Felis_catus
ENSCPOG00000014251	SWT1	63	54.352	ENSFALG00000003206	SWT1	85	42.583	Ficedula_albicollis
ENSCPOG00000014251	SWT1	100	85.817	ENSFDAG00000007569	SWT1	93	85.817	Fukomys_damarensis
ENSCPOG00000014251	SWT1	65	52.799	ENSGALG00000034230	SWT1	61	53.172	Gallus_gallus
ENSCPOG00000014251	SWT1	76	32.116	ENSGAFG00000007803	-	57	32.699	Gambusia_affinis
ENSCPOG00000014251	SWT1	76	51.629	ENSGAGG00000025050	SWT1	92	57.795	Gopherus_agassizii
ENSCPOG00000014251	SWT1	58	82.721	ENSGGOG00000041167	-	84	82.721	Gorilla_gorilla
ENSCPOG00000014251	SWT1	71	30.744	ENSHBUG00000006188	swt1	66	31.561	Haplochromis_burtoni
ENSCPOG00000014251	SWT1	100	86.800	ENSHGLG00000006542	SWT1	94	86.800	Heterocephalus_glaber_female
ENSCPOG00000014251	SWT1	100	86.282	ENSHGLG00100014408	SWT1	94	86.282	Heterocephalus_glaber_male
ENSCPOG00000014251	SWT1	77	33.489	ENSIPUG00000009113	-	64	33.489	Ictalurus_punctatus
ENSCPOG00000014251	SWT1	100	75.508	ENSSTOG00000010356	SWT1	93	75.627	Ictidomys_tridecemlineatus
ENSCPOG00000014251	SWT1	100	68.557	ENSJJAG00000015927	Swt1	93	68.557	Jaculus_jaculus
ENSCPOG00000014251	SWT1	63	33.640	ENSKMAG00000012533	swt1	54	33.640	Kryptolebias_marmoratus
ENSCPOG00000014251	SWT1	62	35.701	ENSLBEG00000020663	-	53	35.701	Labrus_bergylta
ENSCPOG00000014251	SWT1	75	45.894	ENSLACG00000009194	SWT1	88	45.894	Latimeria_chalumnae
ENSCPOG00000014251	SWT1	70	39.965	ENSLOCG00000001749	swt1	93	41.860	Lepisosteus_oculatus
ENSCPOG00000014251	SWT1	65	84.601	ENSLAFG00000004346	-	89	84.601	Loxodonta_africana
ENSCPOG00000014251	SWT1	100	74.852	ENSMFAG00000031793	SWT1	89	82.824	Macaca_fascicularis
ENSCPOG00000014251	SWT1	100	72.515	ENSMMUG00000013882	SWT1	88	79.271	Macaca_mulatta
ENSCPOG00000014251	SWT1	100	74.852	ENSMNEG00000035502	SWT1	98	74.823	Macaca_nemestrina
ENSCPOG00000014251	SWT1	100	75.592	ENSMLEG00000038692	SWT1	89	83.270	Mandrillus_leucophaeus
ENSCPOG00000014251	SWT1	68	31.615	ENSMZEG00005018489	swt1	66	31.966	Maylandia_zebra
ENSCPOG00000014251	SWT1	65	51.292	ENSMGAG00000000973	SWT1	91	51.292	Meleagris_gallopavo
ENSCPOG00000014251	SWT1	99	67.587	ENSMAUG00000007996	Swt1	93	68.225	Mesocricetus_auratus
ENSCPOG00000014251	SWT1	100	77.133	ENSMICG00000014975	SWT1	93	77.488	Microcebus_murinus
ENSCPOG00000014251	SWT1	100	71.976	ENSMOCG00000009776	Swt1	91	71.976	Microtus_ochrogaster
ENSCPOG00000014251	SWT1	100	56.813	ENSMODG00000007472	SWT1	93	56.813	Monodelphis_domestica
ENSCPOG00000014251	SWT1	62	36.450	ENSMALG00000019308	swt1	52	36.450	Monopterus_albus
ENSCPOG00000014251	SWT1	100	68.345	MGP_CAROLIEiJ_G0014692	Swt1	93	69.185	Mus_caroli
ENSCPOG00000014251	SWT1	100	67.266	ENSMUSG00000052748	Swt1	92	82.022	Mus_musculus
ENSCPOG00000014251	SWT1	100	69.784	MGP_PahariEiJ_G0027928	Swt1	96	67.316	Mus_pahari
ENSCPOG00000014251	SWT1	100	67.866	MGP_SPRETEiJ_G0015499	Swt1	96	65.667	Mus_spretus
ENSCPOG00000014251	SWT1	100	75.119	ENSMPUG00000011913	SWT1	93	75.119	Mustela_putorius_furo
ENSCPOG00000014251	SWT1	99	72.389	ENSMLUG00000001142	SWT1	91	72.302	Myotis_lucifugus
ENSCPOG00000014251	SWT1	100	72.782	ENSNGAG00000021080	Swt1	91	73.022	Nannospalax_galili
ENSCPOG00000014251	SWT1	100	75.563	ENSNLEG00000018031	SWT1	93	75.563	Nomascus_leucogenys
ENSCPOG00000014251	SWT1	100	42.230	ENSMEUG00000000236	-	93	42.705	Notamacropus_eugenii
ENSCPOG00000014251	SWT1	88	66.667	ENSOPRG00000000692	SWT1	81	66.667	Ochotona_princeps
ENSCPOG00000014251	SWT1	64	34.875	ENSONIG00000009994	swt1	94	34.451	Oreochromis_niloticus
ENSCPOG00000014251	SWT1	85	55.382	ENSOANG00000001013	-	88	55.382	Ornithorhynchus_anatinus
ENSCPOG00000014251	SWT1	100	64.455	ENSOCUG00000004901	SWT1	93	64.692	Oryctolagus_cuniculus
ENSCPOG00000014251	SWT1	62	33.517	ENSORLG00000009682	swt1	54	33.517	Oryzias_latipes
ENSCPOG00000014251	SWT1	62	33.886	ENSORLG00020011654	swt1	54	33.886	Oryzias_latipes_hni
ENSCPOG00000014251	SWT1	62	33.517	ENSORLG00015007734	swt1	54	33.517	Oryzias_latipes_hsok
ENSCPOG00000014251	SWT1	76	32.719	ENSOMEG00000006607	swt1	62	32.719	Oryzias_melastigma
ENSCPOG00000014251	SWT1	100	75.297	ENSOGAG00000016195	SWT1	93	75.297	Otolemur_garnettii
ENSCPOG00000014251	SWT1	100	77.208	ENSOARG00000004156	SWT1	91	77.208	Ovis_aries
ENSCPOG00000014251	SWT1	100	74.645	ENSPPAG00000021400	SWT1	93	74.645	Pan_paniscus
ENSCPOG00000014251	SWT1	100	76.128	ENSPPRG00000023754	SWT1	93	76.128	Panthera_pardus
ENSCPOG00000014251	SWT1	100	76.128	ENSPTIG00000021889	SWT1	93	76.128	Panthera_tigris_altaica
ENSCPOG00000014251	SWT1	100	74.526	ENSPTRG00000001777	SWT1	93	74.526	Pan_troglodytes
ENSCPOG00000014251	SWT1	100	74.734	ENSPANG00000005099	SWT1	89	82.510	Papio_anubis
ENSCPOG00000014251	SWT1	63	35.674	ENSPKIG00000005979	swt1	53	35.674	Paramormyrops_kingsleyae
ENSCPOG00000014251	SWT1	66	55.185	ENSPSIG00000008961	SWT1	89	43.401	Pelodiscus_sinensis
ENSCPOG00000014251	SWT1	100	70.983	ENSPEMG00000008208	Swt1	91	70.983	Peromyscus_maniculatus_bairdii
ENSCPOG00000014251	SWT1	100	58.303	ENSPCIG00000002443	SWT1	90	72.059	Phascolarctos_cinereus
ENSCPOG00000014251	SWT1	64	33.449	ENSPFOG00000010988	-	64	33.449	Poecilia_formosa
ENSCPOG00000014251	SWT1	62	33.818	ENSPLAG00000022908	-	54	33.818	Poecilia_latipinna
ENSCPOG00000014251	SWT1	62	33.818	ENSPMEG00000006943	-	54	33.818	Poecilia_mexicana
ENSCPOG00000014251	SWT1	100	74.289	ENSPPYG00000000415	SWT1	93	74.289	Pongo_abelii
ENSCPOG00000014251	SWT1	98	63.030	ENSPCAG00000008337	SWT1	91	63.030	Procavia_capensis
ENSCPOG00000014251	SWT1	74	85.714	ENSPCOG00000018195	-	83	85.714	Propithecus_coquereli
ENSCPOG00000014251	SWT1	81	76.074	ENSPVAG00000005968	SWT1	73	76.169	Pteropus_vampyrus
ENSCPOG00000014251	SWT1	68	31.615	ENSPNYG00000012934	swt1	66	31.966	Pundamilia_nyererei
ENSCPOG00000014251	SWT1	63	38.031	ENSPNAG00000017795	swt1	53	38.031	Pygocentrus_nattereri
ENSCPOG00000014251	SWT1	100	70.215	ENSRNOG00000032258	Swt1	91	71.053	Rattus_norvegicus
ENSCPOG00000014251	SWT1	100	71.445	ENSRBIG00000040630	SWT1	89	79.159	Rhinopithecus_bieti
ENSCPOG00000014251	SWT1	75	73.742	ENSRROG00000028596	SWT1	100	73.742	Rhinopithecus_roxellana
ENSCPOG00000014251	SWT1	100	75.296	ENSSBOG00000028825	SWT1	93	75.296	Saimiri_boliviensis_boliviensis
ENSCPOG00000014251	SWT1	100	56.863	ENSSHAG00000009241	SWT1	100	56.802	Sarcophilus_harrisii
ENSCPOG00000014251	SWT1	63	38.953	ENSSFOG00015004895	swt1	51	38.953	Scleropages_formosus
ENSCPOG00000014251	SWT1	62	34.270	ENSSDUG00000012345	swt1	53	34.457	Seriola_dumerili
ENSCPOG00000014251	SWT1	62	34.082	ENSSLDG00000003821	swt1	53	34.270	Seriola_lalandi_dorsalis
ENSCPOG00000014251	SWT1	65	50.000	ENSSARG00000011524	-	99	50.000	Sorex_araneus
ENSCPOG00000014251	SWT1	76	49.451	ENSSPUG00000003899	SWT1	88	43.926	Sphenodon_punctatus
ENSCPOG00000014251	SWT1	62	33.271	ENSSPAG00000001030	swt1	53	33.271	Stegastes_partitus
ENSCPOG00000014251	SWT1	100	77.354	ENSSSCG00000015569	SWT1	100	77.234	Sus_scrofa
ENSCPOG00000014251	SWT1	63	53.968	ENSTGUG00000003718	-	90	53.968	Taeniopygia_guttata
ENSCPOG00000014251	SWT1	65	35.055	ENSTRUG00000006420	swt1	57	35.055	Takifugu_rubripes
ENSCPOG00000014251	SWT1	100	72.835	ENSTTRG00000005914	SWT1	93	72.835	Tursiops_truncatus
ENSCPOG00000014251	SWT1	100	73.690	ENSUAMG00000020937	SWT1	91	76.933	Ursus_americanus
ENSCPOG00000014251	SWT1	100	74.762	ENSUMAG00000021918	SWT1	97	75.357	Ursus_maritimus
ENSCPOG00000014251	SWT1	91	83.056	ENSVPAG00000011855	SWT1	85	83.056	Vicugna_pacos
ENSCPOG00000014251	SWT1	100	74.908	ENSVVUG00000009182	SWT1	93	74.908	Vulpes_vulpes
ENSCPOG00000014251	SWT1	66	33.969	ENSXMAG00000023472	-	57	33.969	Xiphophorus_maculatus