EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPOG00000014266 (Gene tree)
Gene ID
100719171
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Plus strand
Length
6223 bases
Position
chrDS562860.1:17219993-17226215
Accession
100719171
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000012853RNA_ligasePF09414.108e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000014408LIG4-2013564XM_003477584ENSCPOP00000012853911 (aa)XP_003477632H0VQM4
Gene Model
Click here to download ENSCPOG00000014266's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014266's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000014266LIG410088.364ENSG00000174405LIG410088.364Homo_sapiens
ENSCPOG00000014266LIG49964.835ENSAPOG00000000866lig49965.055Acanthochromis_polyacanthus
ENSCPOG00000014266LIG410086.937ENSAMEG00000019685LIG49986.937Ailuropoda_melanoleuca
ENSCPOG00000014266LIG49965.347ENSACIG00000018309lig49965.567Amphilophus_citrinellus
ENSCPOG00000014266LIG49964.615ENSAOCG00000011768lig49964.835Amphiprion_ocellaris
ENSCPOG00000014266LIG49964.725ENSAPEG00000017815lig49964.945Amphiprion_percula
ENSCPOG00000014266LIG49964.286ENSATEG00000005583lig49964.396Anabas_testudineus
ENSCPOG00000014266LIG49774.432ENSAPLG00000001673LIG49974.432Anas_platyrhynchos
ENSCPOG00000014266LIG49974.751ENSACAG00000014566LIG49974.751Anolis_carolinensis
ENSCPOG00000014266LIG410087.706ENSANAG00000012446LIG410087.706Aotus_nancymaae
ENSCPOG00000014266LIG49965.017ENSACLG00000027051lig49965.017Astatotilapia_calliptera
ENSCPOG00000014266LIG49964.661ENSAMXG00000008192lig49464.661Astyanax_mexicanus
ENSCPOG00000014266LIG410087.157ENSBTAG00000015868LIG410087.157Bos_taurus
ENSCPOG00000014266LIG410087.047ENSCJAG00000014689LIG410087.047Callithrix_jacchus
ENSCPOG00000014266LIG410087.706ENSCAFG00000006031LIG410087.706Canis_familiaris
ENSCPOG00000014266LIG410087.706ENSCAFG00020021230LIG410087.706Canis_lupus_dingo
ENSCPOG00000014266LIG410086.608ENSCHIG00000001019LIG410086.608Capra_hircus
ENSCPOG00000014266LIG49999.889ENSCAPG00000006284LIG49999.889Cavia_aperea
ENSCPOG00000014266LIG410087.925ENSCCAG00000019971LIG410087.925Cebus_capucinus
ENSCPOG00000014266LIG410087.596ENSCATG00000021075LIG410087.596Cercocebus_atys
ENSCPOG00000014266LIG410093.304ENSCLAG00000003376LIG410093.304Chinchilla_lanigera
ENSCPOG00000014266LIG410087.706ENSCSAG00000000211LIG410087.706Chlorocebus_sabaeus
ENSCPOG00000014266LIG49977.704ENSCPBG00000023291LIG410077.124Chrysemys_picta_bellii
ENSCPOG00000014266LIG46846.900ENSCING00000009536-9546.900Ciona_intestinalis
ENSCPOG00000014266LIG48346.658ENSCSAVG00000010336-9846.658Ciona_savignyi
ENSCPOG00000014266LIG410087.706ENSCANG00000005805LIG410087.706Colobus_angolensis_palliatus
ENSCPOG00000014266LIG410085.965ENSCGRG00001012072Lig410085.965Cricetulus_griseus_chok1gshd
ENSCPOG00000014266LIG410085.965ENSCGRG00000013417Lig410085.965Cricetulus_griseus_crigri
ENSCPOG00000014266LIG49765.158ENSCSEG00000013905lig49565.158Cynoglossus_semilaevis
ENSCPOG00000014266LIG49964.784ENSCVAG00000007896lig49964.784Cyprinodon_variegatus
ENSCPOG00000014266LIG49964.080ENSDARG00000060620lig49864.080Danio_rerio
ENSCPOG00000014266LIG410086.404ENSDNOG00000000513LIG410086.404Dasypus_novemcinctus
ENSCPOG00000014266LIG410085.510ENSDORG00000027303Lig410085.510Dipodomys_ordii
ENSCPOG00000014266LIG48931.653FBgn0030506Lig49131.653Drosophila_melanogaster
ENSCPOG00000014266LIG49982.373ENSETEG00000015563LIG410082.705Echinops_telfairi
ENSCPOG00000014266LIG49943.382ENSEBUG00000014243lig49943.382Eptatretus_burgeri
ENSCPOG00000014266LIG410087.706ENSEASG00005022073LIG410087.706Equus_asinus_asinus
ENSCPOG00000014266LIG410087.267ENSECAG00000003257LIG410087.267Equus_caballus
ENSCPOG00000014266LIG49965.160ENSELUG00000006787lig49965.160Esox_lucius
ENSCPOG00000014266LIG410088.035ENSFCAG00000031985LIG410088.035Felis_catus
ENSCPOG00000014266LIG48975.400ENSFALG00000004214LIG49875.400Ficedula_albicollis
ENSCPOG00000014266LIG410091.328ENSFDAG00000008973LIG410091.328Fukomys_damarensis
ENSCPOG00000014266LIG49964.673ENSFHEG00000007398lig48964.784Fundulus_heteroclitus
ENSCPOG00000014266LIG48563.566ENSGMOG00000012843lig49963.566Gadus_morhua
ENSCPOG00000014266LIG410073.690ENSGALG00000016854LIG410073.690Gallus_gallus
ENSCPOG00000014266LIG49964.143ENSGAFG00000019779lig49563.916Gambusia_affinis
ENSCPOG00000014266LIG49963.234ENSGACG00000014135lig49963.344Gasterosteus_aculeatus
ENSCPOG00000014266LIG410088.255ENSGGOG00000027771LIG410088.255Gorilla_gorilla
ENSCPOG00000014266LIG49964.796ENSHBUG00000006245lig49964.796Haplochromis_burtoni
ENSCPOG00000014266LIG410091.328ENSHGLG00000000718LIG410091.328Heterocephalus_glaber_female
ENSCPOG00000014266LIG410091.328ENSHGLG00100003265LIG410091.328Heterocephalus_glaber_male
ENSCPOG00000014266LIG49964.184ENSHCOG00000012010lig49964.184Hippocampus_comes
ENSCPOG00000014266LIG49964.615ENSIPUG00000013748lig49964.615Ictalurus_punctatus
ENSCPOG00000014266LIG410087.596ENSSTOG00000024303LIG410087.596Ictidomys_tridecemlineatus
ENSCPOG00000014266LIG410085.071ENSJJAG00000006750Lig410085.071Jaculus_jaculus
ENSCPOG00000014266LIG49964.452ENSKMAG00000001149lig49964.452Kryptolebias_marmoratus
ENSCPOG00000014266LIG49165.625ENSLBEG00000014578lig410065.865Labrus_bergylta
ENSCPOG00000014266LIG49971.903ENSLACG00000003282LIG49971.903Latimeria_chalumnae
ENSCPOG00000014266LIG49969.408ENSLOCG00000008901lig49869.408Lepisosteus_oculatus
ENSCPOG00000014266LIG410084.666ENSLAFG00000031152LIG410084.666Loxodonta_africana
ENSCPOG00000014266LIG410087.486ENSMFAG00000037235LIG410087.486Macaca_fascicularis
ENSCPOG00000014266LIG410087.486ENSMMUG00000008874LIG410087.486Macaca_mulatta
ENSCPOG00000014266LIG410087.486ENSMNEG00000023575LIG410087.486Macaca_nemestrina
ENSCPOG00000014266LIG410087.706ENSMLEG00000026720LIG410087.706Mandrillus_leucophaeus
ENSCPOG00000014266LIG49964.505ENSMAMG00000008472lig49964.725Mastacembelus_armatus
ENSCPOG00000014266LIG49965.017ENSMZEG00005001855lig49965.017Maylandia_zebra
ENSCPOG00000014266LIG49974.643ENSMGAG00000015532LIG49974.643Meleagris_gallopavo
ENSCPOG00000014266LIG410084.303ENSMOCG00000019000Lig410084.303Microtus_ochrogaster
ENSCPOG00000014266LIG49963.898ENSMMOG00000004390lig49963.898Mola_mola
ENSCPOG00000014266LIG410081.229ENSMODG00000025064LIG410081.229Monodelphis_domestica
ENSCPOG00000014266LIG49964.784ENSMALG00000008555lig49964.784Monopterus_albus
ENSCPOG00000014266LIG410085.401MGP_CAROLIEiJ_G0030809Lig410085.401Mus_caroli
ENSCPOG00000014266LIG410085.730ENSMUSG00000049717Lig410085.730Mus_musculus
ENSCPOG00000014266LIG410085.401MGP_PahariEiJ_G0021270Lig410085.401Mus_pahari
ENSCPOG00000014266LIG410085.840MGP_SPRETEiJ_G0031917Lig410085.840Mus_spretus
ENSCPOG00000014266LIG410087.486ENSMPUG00000018675LIG410087.486Mustela_putorius_furo
ENSCPOG00000014266LIG410087.047ENSMLUG00000001267LIG410087.047Myotis_lucifugus
ENSCPOG00000014266LIG410085.291ENSNGAG00000013258Lig410085.291Nannospalax_galili
ENSCPOG00000014266LIG49965.017ENSNBRG00000021252lig49965.017Neolamprologus_brichardi
ENSCPOG00000014266LIG410088.584ENSNLEG00000007888LIG410088.584Nomascus_leucogenys
ENSCPOG00000014266LIG410085.181ENSOPRG00000005765LIG410085.181Ochotona_princeps
ENSCPOG00000014266LIG410092.097ENSODEG00000019683LIG410092.097Octodon_degus
ENSCPOG00000014266LIG49965.127ENSONIG00000011969lig49865.347Oreochromis_niloticus
ENSCPOG00000014266LIG410086.828ENSOCUG00000015734LIG410086.828Oryctolagus_cuniculus
ENSCPOG00000014266LIG49963.956ENSORLG00000004041lig49964.066Oryzias_latipes
ENSCPOG00000014266LIG49964.396ENSORLG00020019607lig49964.505Oryzias_latipes_hni
ENSCPOG00000014266LIG49963.846ENSORLG00015017754lig49963.956Oryzias_latipes_hsok
ENSCPOG00000014266LIG47469.822ENSOMEG00000003459lig49869.822Oryzias_melastigma
ENSCPOG00000014266LIG410086.623ENSOGAG00000032120LIG49986.623Otolemur_garnettii
ENSCPOG00000014266LIG48387.434ENSOARG00000005590LIG49987.434Ovis_aries
ENSCPOG00000014266LIG410088.145ENSPPAG00000032998LIG410088.145Pan_paniscus
ENSCPOG00000014266LIG410088.364ENSPPRG00000017804LIG410088.364Panthera_pardus
ENSCPOG00000014266LIG410088.255ENSPTIG00000010051LIG410088.255Panthera_tigris_altaica
ENSCPOG00000014266LIG410088.255ENSPTRG00000006025LIG410088.255Pan_troglodytes
ENSCPOG00000014266LIG410087.706ENSPANG00000007562LIG410087.706Papio_anubis
ENSCPOG00000014266LIG49965.203ENSPKIG00000011645lig49865.203Paramormyrops_kingsleyae
ENSCPOG00000014266LIG49977.033ENSPSIG00000001504LIG49977.033Pelodiscus_sinensis
ENSCPOG00000014266LIG49962.667ENSPMGG00000013486lig49962.239Periophthalmus_magnuspinnatus
ENSCPOG00000014266LIG410085.526ENSPEMG00000000076Lig410085.526Peromyscus_maniculatus_bairdii
ENSCPOG00000014266LIG410081.798ENSPCIG00000021882LIG410081.798Phascolarctos_cinereus
ENSCPOG00000014266LIG49964.182ENSPFOG00000000797lig49963.846Poecilia_formosa
ENSCPOG00000014266LIG49964.071ENSPLAG00000001196lig49963.736Poecilia_latipinna
ENSCPOG00000014266LIG49964.182ENSPMEG00000021353lig49963.956Poecilia_mexicana
ENSCPOG00000014266LIG49963.849ENSPREG00000007323lig49963.776Poecilia_reticulata
ENSCPOG00000014266LIG410087.925ENSPPYG00000005540LIG410087.925Pongo_abelii
ENSCPOG00000014266LIG410087.377ENSPVAG00000016403LIG410087.377Pteropus_vampyrus
ENSCPOG00000014266LIG49964.906ENSPNYG00000009660lig49964.906Pundamilia_nyererei
ENSCPOG00000014266LIG410063.965ENSPNAG00000028069LIG410063.965Pygocentrus_nattereri
ENSCPOG00000014266LIG410063.965ENSPNAG00000028056lig410063.965Pygocentrus_nattereri
ENSCPOG00000014266LIG410084.523ENSRNOG00000014605Lig410084.523Rattus_norvegicus
ENSCPOG00000014266LIG410086.498ENSRBIG00000039962LIG410086.498Rhinopithecus_bieti
ENSCPOG00000014266LIG410087.377ENSRROG00000006040LIG410087.377Rhinopithecus_roxellana
ENSCPOG00000014266LIG410087.596ENSSBOG00000019029LIG410087.596Saimiri_boliviensis_boliviensis
ENSCPOG00000014266LIG410078.046ENSSHAG00000009525LIG410078.509Sarcophilus_harrisii
ENSCPOG00000014266LIG410064.847ENSSFOG00015012835lig410064.847Scleropages_formosus
ENSCPOG00000014266LIG49962.126ENSSMAG00000011267lig49962.126Scophthalmus_maximus
ENSCPOG00000014266LIG49964.967ENSSDUG00000010343lig49864.967Seriola_dumerili
ENSCPOG00000014266LIG49963.407ENSSLDG00000003239lig49963.407Seriola_lalandi_dorsalis
ENSCPOG00000014266LIG410081.072ENSSARG00000006573LIG410081.072Sorex_araneus
ENSCPOG00000014266LIG49376.540ENSSPUG00000002444LIG410076.540Sphenodon_punctatus
ENSCPOG00000014266LIG49964.615ENSSPAG00000001609lig49964.615Stegastes_partitus
ENSCPOG00000014266LIG410085.071ENSSSCG00000009540LIG410085.071Sus_scrofa
ENSCPOG00000014266LIG49974.558ENSTGUG00000010795LIG49974.558Taeniopygia_guttata
ENSCPOG00000014266LIG49963.956ENSTRUG00000009984lig49963.956Takifugu_rubripes
ENSCPOG00000014266LIG49964.615ENSTNIG00000010348lig49964.835Tetraodon_nigroviridis
ENSCPOG00000014266LIG410087.377ENSTBEG00000017741LIG410087.377Tupaia_belangeri
ENSCPOG00000014266LIG410087.706ENSTTRG00000012660LIG410087.706Tursiops_truncatus
ENSCPOG00000014266LIG410087.157ENSUAMG00000003773LIG410087.157Ursus_americanus
ENSCPOG00000014266LIG49970.595ENSXETG00000002654lig49970.595Xenopus_tropicalis
ENSCPOG00000014266LIG49963.960ENSXCOG00000017401lig49963.516Xiphophorus_couchianus
ENSCPOG00000014266LIG49964.333ENSXMAG00000015142lig49963.886Xiphophorus_maculatus

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