EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000014613 (Gene tree)
Gene ID
100734967
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
9264 bases
Position
chrDS562950.1:2900842-2910105
Accession
100734967
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000021480RRM_1PF00076.225.2e-4312
ENSCPOP00000021480RRM_1PF00076.225.2e-4322
ENSCPOP00000013167RRM_1PF00076.226e-4312
ENSCPOP00000013167RRM_1PF00076.226e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000014758PUF60-2011683XM_003463676ENSCPOP00000013167560 (aa)XP_003463724H0VRF5
ENSCPOT00000042721PUF60-2021632-ENSCPOP00000021480543 (aa)-A0A286X7T0
Gene Model
Click here to download ENSCPOG00000014613's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014613's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000014613PUF605632.432ENSCPOG00000003539CELF37833.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000014613PUF609993.023ENSG00000179950PUF609799.392Homo_sapiens
ENSCPOG00000014613PUF609481.015ENSAPOG00000001713puf60b9981.015Acanthochromis_polyacanthus
ENSCPOG00000014613PUF609991.234ENSAMEG00000006406PUF609991.055Ailuropoda_melanoleuca
ENSCPOG00000014613PUF609372.762ENSACIG00000003263-9973.194Amphilophus_citrinellus
ENSCPOG00000014613PUF609380.762ENSACIG00000021705puf60b10080.762Amphilophus_citrinellus
ENSCPOG00000014613PUF609476.792ENSAOCG00000015558-9977.358Amphiprion_ocellaris
ENSCPOG00000014613PUF609480.979ENSAOCG00000005395puf60b10081.714Amphiprion_ocellaris
ENSCPOG00000014613PUF609478.058ENSAPEG00000011923puf60b9978.058Amphiprion_percula
ENSCPOG00000014613PUF609370.669ENSAPEG00000001836-9971.735Amphiprion_percula
ENSCPOG00000014613PUF609476.560ENSATEG00000006303-9976.938Anabas_testudineus
ENSCPOG00000014613PUF609480.827ENSATEG00000001730puf60b9980.827Anabas_testudineus
ENSCPOG00000014613PUF609492.776ENSAPLG00000010150PUF6010092.776Anas_platyrhynchos
ENSCPOG00000014613PUF609490.909ENSACAG00000001645PUF609790.772Anolis_carolinensis
ENSCPOG00000014613PUF609992.692ENSANAG00000018626PUF6010093.462Aotus_nancymaae
ENSCPOG00000014613PUF609380.762ENSACLG00000004462puf60b10080.762Astatotilapia_calliptera
ENSCPOG00000014613PUF609479.221ENSAMXG00000036570puf60a9779.806Astyanax_mexicanus
ENSCPOG00000014613PUF609371.614ENSAMXG00000041030puf60b10069.888Astyanax_mexicanus
ENSCPOG00000014613PUF609993.393ENSBTAG00000037493PUF609993.916Bos_taurus
ENSCPOG00000014613PUF607452.650WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSCPOG00000014613PUF609992.883ENSCJAG00000021485PUF609993.238Callithrix_jacchus
ENSCPOG00000014613PUF609993.542ENSCAFG00000001400PUF609993.542Canis_familiaris
ENSCPOG00000014613PUF609993.739ENSCAFG00020018754PUF609993.739Canis_lupus_dingo
ENSCPOG00000014613PUF609594.007ENSCHIG00000001618PUF609293.178Capra_hircus
ENSCPOG00000014613PUF609992.705ENSTSYG00000011912PUF6010094.038Carlito_syrichta
ENSCPOG00000014613PUF609992.692ENSCCAG00000007744PUF609993.226Cebus_capucinus
ENSCPOG00000014613PUF609993.023ENSCATG00000035405PUF609992.844Cercocebus_atys
ENSCPOG00000014613PUF609993.238ENSCLAG00000009154PUF609993.594Chinchilla_lanigera
ENSCPOG00000014613PUF609393.462ENSCSAG00000008878PUF6010093.462Chlorocebus_sabaeus
ENSCPOG00000014613PUF609492.748ENSCPBG00000005595PUF609892.966Chrysemys_picta_bellii
ENSCPOG00000014613PUF609443.068ENSCING00000008436-9843.585Ciona_intestinalis
ENSCPOG00000014613PUF605763.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSCPOG00000014613PUF609046.138ENSCSAVG00000004765-9745.714Ciona_savignyi
ENSCPOG00000014613PUF609151.331ENSCSAVG00000001385-9950.954Ciona_savignyi
ENSCPOG00000014613PUF608099.085ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSCPOG00000014613PUF609992.527ENSCGRG00001017442Puf609992.883Cricetulus_griseus_chok1gshd
ENSCPOG00000014613PUF609593.421ENSCGRG00000003717Puf609992.500Cricetulus_griseus_crigri
ENSCPOG00000014613PUF609977.500ENSCSEG00000019887puf60b9379.849Cynoglossus_semilaevis
ENSCPOG00000014613PUF609370.392ENSCSEG00000014845-8972.549Cynoglossus_semilaevis
ENSCPOG00000014613PUF608574.948ENSCVAG00000001560-9874.686Cyprinodon_variegatus
ENSCPOG00000014613PUF609379.429ENSCVAG00000009386puf60b10080.762Cyprinodon_variegatus
ENSCPOG00000014613PUF609374.067ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCPOG00000014613PUF609381.955ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCPOG00000014613PUF609876.087ENSDNOG00000043278PUF609876.471Dasypus_novemcinctus
ENSCPOG00000014613PUF609993.537ENSDORG00000004585Puf6010093.357Dipodomys_ordii
ENSCPOG00000014613PUF607865.704FBgn0028577hfp9947.993Drosophila_melanogaster
ENSCPOG00000014613PUF609458.632ENSEBUG00000014291puf60b8561.658Eptatretus_burgeri
ENSCPOG00000014613PUF609067.959ENSEBUG00000005470-8867.551Eptatretus_burgeri
ENSCPOG00000014613PUF609993.896ENSEASG00005009695PUF609993.896Equus_asinus_asinus
ENSCPOG00000014613PUF609994.255ENSECAG00000024681PUF609994.434Equus_caballus
ENSCPOG00000014613PUF609478.531ENSELUG00000006507puf60b9975.818Esox_lucius
ENSCPOG00000014613PUF609778.871ENSELUG00000018443-9980.822Esox_lucius
ENSCPOG00000014613PUF609992.705ENSFCAG00000001045PUF6010093.654Felis_catus
ENSCPOG00000014613PUF609480.418ENSFALG00000001136PUF609881.559Ficedula_albicollis
ENSCPOG00000014613PUF609992.883ENSFDAG00000017177PUF609993.238Fukomys_damarensis
ENSCPOG00000014613PUF609479.284ENSFHEG00000020046puf60b10081.333Fundulus_heteroclitus
ENSCPOG00000014613PUF608974.502ENSFHEG00000021687PUF6010075.254Fundulus_heteroclitus
ENSCPOG00000014613PUF609467.164ENSGMOG00000006392puf60b10066.418Gadus_morhua
ENSCPOG00000014613PUF606198.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSCPOG00000014613PUF609478.908ENSGAFG00000021040puf60b10080.762Gambusia_affinis
ENSCPOG00000014613PUF609374.904ENSGAFG00000004334-9974.138Gambusia_affinis
ENSCPOG00000014613PUF609366.412ENSGACG00000001484-10065.458Gasterosteus_aculeatus
ENSCPOG00000014613PUF609468.480ENSGACG00000004717puf60b9867.985Gasterosteus_aculeatus
ENSCPOG00000014613PUF609492.748ENSGAGG00000013289PUF609292.966Gopherus_agassizii
ENSCPOG00000014613PUF609993.023ENSGGOG00000004646PUF609992.844Gorilla_gorilla
ENSCPOG00000014613PUF609480.038ENSHBUG00000015118puf60b10080.762Haplochromis_burtoni
ENSCPOG00000014613PUF609477.213ENSHBUG00000009634-10077.362Haplochromis_burtoni
ENSCPOG00000014613PUF609992.883ENSHGLG00000006111PUF609993.238Heterocephalus_glaber_female
ENSCPOG00000014613PUF609992.883ENSHGLG00100012362PUF609993.238Heterocephalus_glaber_male
ENSCPOG00000014613PUF609377.879ENSHCOG00000015541puf60b10077.473Hippocampus_comes
ENSCPOG00000014613PUF609162.573ENSHCOG00000000378-9961.007Hippocampus_comes
ENSCPOG00000014613PUF609373.881ENSIPUG00000004660puf60b9973.645Ictalurus_punctatus
ENSCPOG00000014613PUF609476.834ENSIPUG00000002453puf60a9977.861Ictalurus_punctatus
ENSCPOG00000014613PUF609993.381ENSSTOG00000025037PUF609993.381Ictidomys_tridecemlineatus
ENSCPOG00000014613PUF609993.214ENSJJAG00000001076Puf609993.571Jaculus_jaculus
ENSCPOG00000014613PUF609380.190ENSKMAG00000016745puf60b10081.333Kryptolebias_marmoratus
ENSCPOG00000014613PUF609373.546ENSKMAG00000010106-10071.481Kryptolebias_marmoratus
ENSCPOG00000014613PUF609776.000ENSLBEG00000012505puf60b9977.551Labrus_bergylta
ENSCPOG00000014613PUF606592.697ENSLACG00000005456PUF609792.416Latimeria_chalumnae
ENSCPOG00000014613PUF609584.673ENSLOCG00000010106puf60b9984.717Lepisosteus_oculatus
ENSCPOG00000014613PUF609592.884ENSLAFG00000022929PUF609991.562Loxodonta_africana
ENSCPOG00000014613PUF609993.023ENSMFAG00000043373PUF609993.726Macaca_fascicularis
ENSCPOG00000014613PUF609993.381ENSMMUG00000013558PUF609993.381Macaca_mulatta
ENSCPOG00000014613PUF609993.023ENSMNEG00000031099PUF609992.844Macaca_nemestrina
ENSCPOG00000014613PUF609393.462ENSMLEG00000040009PUF6010093.462Mandrillus_leucophaeus
ENSCPOG00000014613PUF609478.154ENSMAMG00000019476-9977.589Mastacembelus_armatus
ENSCPOG00000014613PUF609580.224ENSMAMG00000010394puf60b10079.221Mastacembelus_armatus
ENSCPOG00000014613PUF609477.401ENSMZEG00005019425-9976.836Maylandia_zebra
ENSCPOG00000014613PUF609380.762ENSMZEG00005018515puf60b10080.762Maylandia_zebra
ENSCPOG00000014613PUF609492.776ENSMGAG00000013070PUF609599.128Meleagris_gallopavo
ENSCPOG00000014613PUF607198.259ENSMAUG00000014267-9998.259Mesocricetus_auratus
ENSCPOG00000014613PUF608978.029ENSMAUG00000018549-9578.029Mesocricetus_auratus
ENSCPOG00000014613PUF609993.381ENSMICG00000012226PUF609994.106Microcebus_murinus
ENSCPOG00000014613PUF609992.705ENSMOCG00000018780Puf609993.060Microtus_ochrogaster
ENSCPOG00000014613PUF609380.952ENSMMOG00000004217puf60b10081.143Mola_mola
ENSCPOG00000014613PUF609470.703ENSMMOG00000018059-9971.267Mola_mola
ENSCPOG00000014613PUF609992.222ENSMODG00000009161PUF609992.407Monodelphis_domestica
ENSCPOG00000014613PUF609473.120ENSMALG00000006797puf60b9973.308Monopterus_albus
ENSCPOG00000014613PUF609476.083ENSMALG00000000200-9974.719Monopterus_albus
ENSCPOG00000014613PUF609992.527MGP_CAROLIEiJ_G0019910Puf609992.883Mus_caroli
ENSCPOG00000014613PUF609992.527ENSMUSG00000002524Puf609992.883Mus_musculus
ENSCPOG00000014613PUF609992.527MGP_PahariEiJ_G0019920Puf609992.883Mus_pahari
ENSCPOG00000014613PUF609992.527MGP_SPRETEiJ_G0020812Puf609992.883Mus_spretus
ENSCPOG00000014613PUF609593.633ENSMPUG00000008137PUF609792.998Mustela_putorius_furo
ENSCPOG00000014613PUF609593.258ENSMLUG00000000238-9892.639Myotis_lucifugus
ENSCPOG00000014613PUF609489.980ENSMLUG00000013032-9889.980Myotis_lucifugus
ENSCPOG00000014613PUF609992.883ENSNGAG00000000712Puf6010093.654Nannospalax_galili
ENSCPOG00000014613PUF609875.360ENSNBRG00000017223-9977.170Neolamprologus_brichardi
ENSCPOG00000014613PUF607881.333ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSCPOG00000014613PUF609993.023ENSNLEG00000002156PUF609992.844Nomascus_leucogenys
ENSCPOG00000014613PUF606899.659ENSOPRG00000002147PUF607499.659Ochotona_princeps
ENSCPOG00000014613PUF6073100.000ENSODEG00000014024-99100.000Octodon_degus
ENSCPOG00000014613PUF609168.689ENSODEG00000015513-9966.168Octodon_degus
ENSCPOG00000014613PUF609477.632ENSONIG00000014030-9977.068Oreochromis_niloticus
ENSCPOG00000014613PUF609480.075ENSONIG00000006247puf60b9980.075Oreochromis_niloticus
ENSCPOG00000014613PUF609272.868ENSOANG00000006962PUF609973.062Ornithorhynchus_anatinus
ENSCPOG00000014613PUF609479.849ENSORLG00000012279puf60b10080.190Oryzias_latipes
ENSCPOG00000014613PUF609374.248ENSORLG00000028655-9974.340Oryzias_latipes
ENSCPOG00000014613PUF609479.849ENSORLG00020007333puf6010080.190Oryzias_latipes_hni
ENSCPOG00000014613PUF609474.157ENSORLG00020018144-9874.248Oryzias_latipes_hni
ENSCPOG00000014613PUF609374.388ENSORLG00015016833-9874.480Oryzias_latipes_hsok
ENSCPOG00000014613PUF609479.174ENSORLG00015007718puf60b10080.076Oryzias_latipes_hsok
ENSCPOG00000014613PUF609475.188ENSOMEG00000022185-9875.141Oryzias_melastigma
ENSCPOG00000014613PUF609477.675ENSOMEG00000001643puf60b10077.165Oryzias_melastigma
ENSCPOG00000014613PUF609594.195ENSOGAG00000006259PUF609993.537Otolemur_garnettii
ENSCPOG00000014613PUF609491.082ENSOARG00000016235PUF609991.082Ovis_aries
ENSCPOG00000014613PUF609993.023ENSPPAG00000029933PUF609992.844Pan_paniscus
ENSCPOG00000014613PUF609992.705ENSPPRG00000003257PUF6010093.654Panthera_pardus
ENSCPOG00000014613PUF609992.593ENSPTIG00000009795PUF609991.445Panthera_tigris_altaica
ENSCPOG00000014613PUF609992.844ENSPTRG00000020670PUF609992.665Pan_troglodytes
ENSCPOG00000014613PUF609593.446ENSPTRG00000043963-9992.819Pan_troglodytes
ENSCPOG00000014613PUF609993.023ENSPANG00000021936PUF609992.844Papio_anubis
ENSCPOG00000014613PUF609978.782ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSCPOG00000014613PUF609482.453ENSPKIG00000012204puf60b10083.397Paramormyrops_kingsleyae
ENSCPOG00000014613PUF609492.600ENSPSIG00000004679PUF609992.600Pelodiscus_sinensis
ENSCPOG00000014613PUF609379.356ENSPMGG00000013444puf60b9979.545Periophthalmus_magnuspinnatus
ENSCPOG00000014613PUF609992.705ENSPEMG00000008820Puf609993.060Peromyscus_maniculatus_bairdii
ENSCPOG00000014613PUF609990.794ENSPCIG00000020270PUF609994.095Phascolarctos_cinereus
ENSCPOG00000014613PUF609479.473ENSPFOG00000019217puf60b10079.923Poecilia_formosa
ENSCPOG00000014613PUF609376.291ENSPFOG00000011118-9776.628Poecilia_formosa
ENSCPOG00000014613PUF609380.000ENSPLAG00000010754puf60b10081.333Poecilia_latipinna
ENSCPOG00000014613PUF609973.201ENSPLAG00000017025-9076.245Poecilia_latipinna
ENSCPOG00000014613PUF609479.473ENSPMEG00000000838puf60b10081.333Poecilia_mexicana
ENSCPOG00000014613PUF609973.201ENSPMEG00000009767-9076.628Poecilia_mexicana
ENSCPOG00000014613PUF609476.881ENSPREG00000005440puf60b10078.937Poecilia_reticulata
ENSCPOG00000014613PUF607497.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSCPOG00000014613PUF607499.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSCPOG00000014613PUF609994.075ENSPCOG00000027981PUF609994.097Propithecus_coquereli
ENSCPOG00000014613PUF6093100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSCPOG00000014613PUF609380.762ENSPNYG00000002556puf60b10080.762Pundamilia_nyererei
ENSCPOG00000014613PUF609477.401ENSPNYG00000004273-9976.836Pundamilia_nyererei
ENSCPOG00000014613PUF609972.029ENSPNAG00000019415puf60b9072.353Pygocentrus_nattereri
ENSCPOG00000014613PUF609479.845ENSPNAG00000019909puf60a9979.845Pygocentrus_nattereri
ENSCPOG00000014613PUF609992.665ENSRNOG00000009960Puf609993.023Rattus_norvegicus
ENSCPOG00000014613PUF609993.023ENSRBIG00000035274PUF609992.844Rhinopithecus_bieti
ENSCPOG00000014613PUF609993.023ENSRROG00000029360PUF609993.726Rhinopithecus_roxellana
ENSCPOG00000014613PUF609989.369ENSSBOG00000027089PUF609892.586Saimiri_boliviensis_boliviensis
ENSCPOG00000014613PUF608894.082ENSSHAG00000006668PUF609294.082Sarcophilus_harrisii
ENSCPOG00000014613PUF609476.978ENSSFOG00015019371puf60a9882.236Scleropages_formosus
ENSCPOG00000014613PUF609377.358ENSSFOG00015019619puf60b9981.124Scleropages_formosus
ENSCPOG00000014613PUF606992.580ENSSMAG00000016381puf60b7392.580Scophthalmus_maximus
ENSCPOG00000014613PUF609478.782ENSSDUG00000009935puf60b9979.559Seriola_dumerili
ENSCPOG00000014613PUF609375.758ENSSDUG00000007048-9875.947Seriola_dumerili
ENSCPOG00000014613PUF609375.895ENSSLDG00000007366-9976.271Seriola_lalandi_dorsalis
ENSCPOG00000014613PUF609381.250ENSSLDG00000024011puf60b10079.406Seriola_lalandi_dorsalis
ENSCPOG00000014613PUF606186.431ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSCPOG00000014613PUF609478.349ENSSPAG00000012144puf60b10079.592Stegastes_partitus
ENSCPOG00000014613PUF609377.462ENSSPAG00000020285-10078.030Stegastes_partitus
ENSCPOG00000014613PUF609593.446ENSSSCG00000038800PUF609893.124Sus_scrofa
ENSCPOG00000014613PUF609489.544ENSTGUG00000012797-10089.544Taeniopygia_guttata
ENSCPOG00000014613PUF609479.323ENSTRUG00000005420puf60b10078.108Takifugu_rubripes
ENSCPOG00000014613PUF609375.149ENSTRUG00000008843-10075.547Takifugu_rubripes
ENSCPOG00000014613PUF609479.511ENSTNIG00000013675puf60b10079.323Tetraodon_nigroviridis
ENSCPOG00000014613PUF609474.242ENSTNIG00000003069-10074.242Tetraodon_nigroviridis
ENSCPOG00000014613PUF605796.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSCPOG00000014613PUF607274.785ENSTBEG00000001899-10075.931Tupaia_belangeri
ENSCPOG00000014613PUF609392.500ENSTTRG00000017088PUF6010092.692Tursiops_truncatus
ENSCPOG00000014613PUF609993.202ENSUAMG00000024917PUF609993.202Ursus_americanus
ENSCPOG00000014613PUF609589.118ENSUMAG00000000272PUF609988.689Ursus_maritimus
ENSCPOG00000014613PUF609993.357ENSVVUG00000022527PUF6010094.038Vulpes_vulpes
ENSCPOG00000014613PUF609489.173ENSXETG00000012469puf609989.205Xenopus_tropicalis
ENSCPOG00000014613PUF609379.331ENSXCOG00000012355puf60b10080.709Xiphophorus_couchianus
ENSCPOG00000014613PUF609475.586ENSXMAG00000010507-9974.805Xiphophorus_maculatus
ENSCPOG00000014613PUF609479.473ENSXMAG00000001862puf60b10081.333Xiphophorus_maculatus

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