EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000014729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1570 bases
Position: chrDS562949.1:448706-450275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023240	PRP4	PF08799.11	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000014874	-	1539	-	ENSCPOP00000023240	512 (aa)	-	A0A286XCU9

Gene Model

Click here to download ENSCPOG00000014729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000014729	-	100	92.706	ENSCPOG00000010747	-	100	92.706
ENSCPOG00000014729	-	54	30.625	ENSCPOG00000006740	POC1A	83	30.625
ENSCPOG00000014729	-	56	36.000	ENSCPOG00000015525	POC1B	61	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014729	-	100	92.514	ENSG00000136875	PRPF4	100	92.514	Homo_sapiens
ENSCPOG00000014729	-	96	71.548	ENSAPOG00000014132	prpf4	98	71.548	Acanthochromis_polyacanthus
ENSCPOG00000014729	-	100	92.514	ENSAMEG00000013048	PRPF4	98	92.514	Ailuropoda_melanoleuca
ENSCPOG00000014729	-	96	71.825	ENSACIG00000005579	prpf4	99	71.825	Amphilophus_citrinellus
ENSCPOG00000014729	-	96	71.485	ENSAOCG00000005457	prpf4	99	71.485	Amphiprion_ocellaris
ENSCPOG00000014729	-	96	71.287	ENSAPEG00000000776	prpf4	99	71.287	Amphiprion_percula
ENSCPOG00000014729	-	96	71.230	ENSATEG00000023013	prpf4	99	71.230	Anabas_testudineus
ENSCPOG00000014729	-	98	84.766	ENSAPLG00000006534	PRPF4	96	84.766	Anas_platyrhynchos
ENSCPOG00000014729	-	100	83.939	ENSACAG00000015110	PRPF4	100	83.939	Anolis_carolinensis
ENSCPOG00000014729	-	100	92.706	ENSANAG00000022464	PRPF4	96	92.706	Aotus_nancymaae
ENSCPOG00000014729	-	96	71.627	ENSACLG00000019031	prpf4	99	71.627	Astatotilapia_calliptera
ENSCPOG00000014729	-	97	58.157	ENSAMXG00000006756	prpf4	99	68.317	Astyanax_mexicanus
ENSCPOG00000014729	-	100	91.939	ENSBTAG00000004571	PRPF4	100	91.939	Bos_taurus
ENSCPOG00000014729	-	83	42.661	WBGene00007972	prp-4	88	42.661	Caenorhabditis_elegans
ENSCPOG00000014729	-	100	92.529	ENSCJAG00000017856	PRPF4	100	92.529	Callithrix_jacchus
ENSCPOG00000014729	-	100	92.514	ENSCAFG00000003224	PRPF4	97	92.514	Canis_familiaris
ENSCPOG00000014729	-	100	92.514	ENSCAFG00020022637	PRPF4	100	92.514	Canis_lupus_dingo
ENSCPOG00000014729	-	100	92.337	ENSCHIG00000024648	-	100	92.337	Capra_hircus
ENSCPOG00000014729	-	100	92.514	ENSTSYG00000010366	PRPF4	100	92.514	Carlito_syrichta
ENSCPOG00000014729	-	81	84.487	ENSCAPG00000008935	PRPF4	97	84.487	Cavia_aperea
ENSCPOG00000014729	-	100	92.514	ENSCCAG00000028990	PRPF4	100	92.514	Cebus_capucinus
ENSCPOG00000014729	-	100	92.322	ENSCATG00000021552	PRPF4	100	92.322	Cercocebus_atys
ENSCPOG00000014729	-	100	92.898	ENSCLAG00000013448	PRPF4	100	92.898	Chinchilla_lanigera
ENSCPOG00000014729	-	87	88.938	ENSCHOG00000007233	PRPF4	100	88.938	Choloepus_hoffmanni
ENSCPOG00000014729	-	99	85.049	ENSCPBG00000019136	PRPF4	74	85.049	Chrysemys_picta_bellii
ENSCPOG00000014729	-	96	54.851	ENSCING00000001299	-	97	54.851	Ciona_intestinalis
ENSCPOG00000014729	-	96	54.134	ENSCSAVG00000009178	-	99	55.411	Ciona_savignyi
ENSCPOG00000014729	-	100	92.514	ENSCANG00000003246	PRPF4	100	92.514	Colobus_angolensis_palliatus
ENSCPOG00000014729	-	100	92.322	ENSCGRG00001016992	Prpf4	100	92.322	Cricetulus_griseus_chok1gshd
ENSCPOG00000014729	-	100	92.322	ENSCGRG00000017560	Prpf4	100	92.322	Cricetulus_griseus_crigri
ENSCPOG00000014729	-	97	70.495	ENSCSEG00000020451	prpf4	99	70.495	Cynoglossus_semilaevis
ENSCPOG00000014729	-	97	74.257	ENSDARG00000067639	prpf4	99	74.257	Danio_rerio
ENSCPOG00000014729	-	100	91.954	ENSDNOG00000013203	PRPF4	100	91.954	Dasypus_novemcinctus
ENSCPOG00000014729	-	100	92.322	ENSDORG00000026275	Prpf4	100	92.322	Dipodomys_ordii
ENSCPOG00000014729	-	87	53.173	FBgn0036733	U4-U6-60K	99	47.263	Drosophila_melanogaster
ENSCPOG00000014729	-	100	90.440	ENSETEG00000020389	PRPF4	100	90.440	Echinops_telfairi
ENSCPOG00000014729	-	85	70.276	ENSEBUG00000015229	prpf4	86	70.737	Eptatretus_burgeri
ENSCPOG00000014729	-	100	92.706	ENSEASG00005022678	PRPF4	100	92.706	Equus_asinus_asinus
ENSCPOG00000014729	-	100	92.706	ENSECAG00000007072	PRPF4	100	92.706	Equus_caballus
ENSCPOG00000014729	-	75	94.979	ENSEEUG00000007480	PRPF4	100	74.672	Erinaceus_europaeus
ENSCPOG00000014729	-	97	76.040	ENSELUG00000007510	prpf4	99	76.040	Esox_lucius
ENSCPOG00000014729	-	100	92.529	ENSFCAG00000005514	PRPF4	100	92.529	Felis_catus
ENSCPOG00000014729	-	87	84.081	ENSFALG00000005423	PRPF4	87	84.081	Ficedula_albicollis
ENSCPOG00000014729	-	100	92.706	ENSFDAG00000005839	PRPF4	100	92.706	Fukomys_damarensis
ENSCPOG00000014729	-	96	70.833	ENSFHEG00000001300	prpf4	99	70.833	Fundulus_heteroclitus
ENSCPOG00000014729	-	98	84.344	ENSGALG00000008857	PRPF4	96	83.721	Gallus_gallus
ENSCPOG00000014729	-	66	67.847	ENSGAFG00000012164	prpf4	70	67.847	Gambusia_affinis
ENSCPOG00000014729	-	96	64.484	ENSGACG00000015476	prpf4	99	63.889	Gasterosteus_aculeatus
ENSCPOG00000014729	-	99	84.854	ENSGAGG00000025029	PRPF4	95	84.854	Gopherus_agassizii
ENSCPOG00000014729	-	100	92.514	ENSGGOG00000006943	PRPF4	100	92.514	Gorilla_gorilla
ENSCPOG00000014729	-	96	71.429	ENSHBUG00000000562	prpf4	99	71.429	Haplochromis_burtoni
ENSCPOG00000014729	-	100	78.405	ENSHGLG00000016628	-	100	79.183	Heterocephalus_glaber_female
ENSCPOG00000014729	-	100	75.816	ENSHGLG00000003838	-	100	75.816	Heterocephalus_glaber_female
ENSCPOG00000014729	-	100	92.706	ENSHGLG00000015191	PRPF4	100	92.706	Heterocephalus_glaber_female
ENSCPOG00000014729	-	100	75.816	ENSHGLG00100005571	-	100	75.816	Heterocephalus_glaber_male
ENSCPOG00000014729	-	97	73.465	ENSIPUG00000017956	PRPF4	99	73.465	Ictalurus_punctatus
ENSCPOG00000014729	-	100	92.131	ENSSTOG00000027833	PRPF4	100	92.131	Ictidomys_tridecemlineatus
ENSCPOG00000014729	-	100	92.898	ENSJJAG00000008838	Prpf4	100	92.898	Jaculus_jaculus
ENSCPOG00000014729	-	96	71.032	ENSKMAG00000013236	prpf4	99	71.032	Kryptolebias_marmoratus
ENSCPOG00000014729	-	96	70.717	ENSLBEG00000020611	prpf4	99	70.717	Labrus_bergylta
ENSCPOG00000014729	-	99	74.423	ENSLACG00000016317	PRPF4	99	74.423	Latimeria_chalumnae
ENSCPOG00000014729	-	97	75.644	ENSLOCG00000000581	prpf4	99	75.644	Lepisosteus_oculatus
ENSCPOG00000014729	-	100	91.762	ENSLAFG00000018225	PRPF4	100	91.762	Loxodonta_africana
ENSCPOG00000014729	-	100	92.131	ENSMFAG00000039397	PRPF4	100	92.131	Macaca_fascicularis
ENSCPOG00000014729	-	100	92.322	ENSMMUG00000005844	PRPF4	100	92.322	Macaca_mulatta
ENSCPOG00000014729	-	100	81.958	ENSMNEG00000033737	PRPF4	100	81.958	Macaca_nemestrina
ENSCPOG00000014729	-	100	92.322	ENSMLEG00000040284	PRPF4	100	92.322	Mandrillus_leucophaeus
ENSCPOG00000014729	-	97	71.525	ENSMAMG00000020141	prpf4	99	70.809	Mastacembelus_armatus
ENSCPOG00000014729	-	96	71.627	ENSMZEG00005023205	prpf4	99	71.627	Maylandia_zebra
ENSCPOG00000014729	-	99	83.172	ENSMGAG00000001796	PRPF4	96	83.172	Meleagris_gallopavo
ENSCPOG00000014729	-	98	92.157	ENSMAUG00000018022	Prpf4	100	91.939	Mesocricetus_auratus
ENSCPOG00000014729	-	100	91.762	ENSMICG00000015022	PRPF4	100	91.762	Microcebus_murinus
ENSCPOG00000014729	-	100	91.747	ENSMOCG00000018273	Prpf4	100	91.747	Microtus_ochrogaster
ENSCPOG00000014729	-	97	69.307	ENSMMOG00000021177	prpf4	99	69.307	Mola_mola
ENSCPOG00000014729	-	100	89.484	ENSMODG00000025096	-	97	89.484	Monodelphis_domestica
ENSCPOG00000014729	-	100	89.293	ENSMODG00000004444	-	100	89.293	Monodelphis_domestica
ENSCPOG00000014729	-	96	71.230	ENSMALG00000013624	prpf4	99	71.230	Monopterus_albus
ENSCPOG00000014729	-	100	92.131	MGP_CAROLIEiJ_G0026078	Prpf4	100	92.131	Mus_caroli
ENSCPOG00000014729	-	100	92.131	ENSMUSG00000066148	Prpf4	100	92.131	Mus_musculus
ENSCPOG00000014729	-	100	91.939	MGP_PahariEiJ_G0028413	Prpf4	100	91.939	Mus_pahari
ENSCPOG00000014729	-	100	92.131	MGP_SPRETEiJ_G0027042	Prpf4	100	92.131	Mus_spretus
ENSCPOG00000014729	-	100	92.514	ENSMPUG00000007883	PRPF4	100	92.514	Mustela_putorius_furo
ENSCPOG00000014729	-	100	92.898	ENSMLUG00000015309	-	97	92.898	Myotis_lucifugus
ENSCPOG00000014729	-	100	90.979	ENSMLUG00000008626	-	97	90.979	Myotis_lucifugus
ENSCPOG00000014729	-	100	87.524	ENSNGAG00000000468	Prpf4	100	87.524	Nannospalax_galili
ENSCPOG00000014729	-	96	71.825	ENSNBRG00000007972	prpf4	99	71.825	Neolamprologus_brichardi
ENSCPOG00000014729	-	100	92.706	ENSNLEG00000016647	PRPF4	100	92.706	Nomascus_leucogenys
ENSCPOG00000014729	-	99	89.105	ENSMEUG00000013256	PRPF4	100	89.105	Notamacropus_eugenii
ENSCPOG00000014729	-	100	91.762	ENSOPRG00000005302	PRPF4	100	91.762	Ochotona_princeps
ENSCPOG00000014729	-	100	93.090	ENSODEG00000018147	PRPF4	100	93.090	Octodon_degus
ENSCPOG00000014729	-	96	71.627	ENSONIG00000012671	prpf4	99	71.627	Oreochromis_niloticus
ENSCPOG00000014729	-	100	92.514	ENSOCUG00000005046	PRPF4	100	92.514	Oryctolagus_cuniculus
ENSCPOG00000014729	-	96	69.721	ENSORLG00000019641	prpf4	99	69.721	Oryzias_latipes
ENSCPOG00000014729	-	96	69.721	ENSORLG00020019438	prpf4	99	69.721	Oryzias_latipes_hni
ENSCPOG00000014729	-	96	69.323	ENSOMEG00000020941	prpf4	99	69.263	Oryzias_melastigma
ENSCPOG00000014729	-	100	88.292	ENSOGAG00000007802	PRPF4	98	88.292	Otolemur_garnettii
ENSCPOG00000014729	-	100	92.514	ENSOARG00000006319	PRPF4	97	92.514	Ovis_aries
ENSCPOG00000014729	-	100	92.514	ENSPPAG00000041797	PRPF4	100	92.514	Pan_paniscus
ENSCPOG00000014729	-	100	92.706	ENSPPRG00000014360	PRPF4	100	92.706	Panthera_pardus
ENSCPOG00000014729	-	100	92.706	ENSPTIG00000009574	PRPF4	100	92.706	Panthera_tigris_altaica
ENSCPOG00000014729	-	100	92.514	ENSPTRG00000021274	PRPF4	100	92.337	Pan_troglodytes
ENSCPOG00000014729	-	100	92.322	ENSPANG00000025776	PRPF4	96	92.322	Papio_anubis
ENSCPOG00000014729	-	97	75.842	ENSPKIG00000017259	prpf4	99	75.842	Paramormyrops_kingsleyae
ENSCPOG00000014729	-	99	84.333	ENSPSIG00000010713	PRPF4	91	84.333	Pelodiscus_sinensis
ENSCPOG00000014729	-	99	54.113	ENSPMGG00000000997	prpf4	99	54.113	Periophthalmus_magnuspinnatus
ENSCPOG00000014729	-	100	92.322	ENSPEMG00000024115	Prpf4	100	92.322	Peromyscus_maniculatus_bairdii
ENSCPOG00000014729	-	99	89.105	ENSPCIG00000003821	PRPF4	99	89.105	Phascolarctos_cinereus
ENSCPOG00000014729	-	96	64.694	ENSPFOG00000013524	prpf4	98	69.255	Poecilia_formosa
ENSCPOG00000014729	-	63	67.901	ENSPLAG00000011620	prpf4	97	66.358	Poecilia_latipinna
ENSCPOG00000014729	-	94	70.482	ENSPMEG00000006813	prpf4	98	70.482	Poecilia_mexicana
ENSCPOG00000014729	-	98	92.203	ENSPCAG00000002561	PRPF4	99	92.203	Procavia_capensis
ENSCPOG00000014729	-	98	92.745	ENSPCOG00000011975	PRPF4	100	92.514	Propithecus_coquereli
ENSCPOG00000014729	-	100	88.506	ENSPVAG00000004708	PRPF4	100	88.506	Pteropus_vampyrus
ENSCPOG00000014729	-	96	71.627	ENSPNYG00000008013	prpf4	99	71.627	Pundamilia_nyererei
ENSCPOG00000014729	-	97	74.851	ENSPNAG00000000697	prpf4	99	74.851	Pygocentrus_nattereri
ENSCPOG00000014729	-	100	92.322	ENSRNOG00000014777	Prpf4	100	92.322	Rattus_norvegicus
ENSCPOG00000014729	-	100	92.514	ENSRBIG00000040221	PRPF4	100	92.514	Rhinopithecus_bieti
ENSCPOG00000014729	-	100	92.514	ENSRROG00000040240	PRPF4	100	92.514	Rhinopithecus_roxellana
ENSCPOG00000014729	-	100	89.484	ENSSHAG00000017658	PRPF4	100	89.484	Sarcophilus_harrisii
ENSCPOG00000014729	-	97	76.634	ENSSFOG00015008963	prpf4	99	76.634	Scleropages_formosus
ENSCPOG00000014729	-	96	70.635	ENSSMAG00000008889	prpf4	99	70.635	Scophthalmus_maximus
ENSCPOG00000014729	-	96	68.127	ENSSDUG00000022083	prpf4	98	68.327	Seriola_dumerili
ENSCPOG00000014729	-	96	68.526	ENSSLDG00000008115	prpf4	98	68.725	Seriola_lalandi_dorsalis
ENSCPOG00000014729	-	100	84.261	ENSSPUG00000015582	PRPF4	100	84.261	Sphenodon_punctatus
ENSCPOG00000014729	-	96	65.878	ENSSPAG00000011286	prpf4	99	65.878	Stegastes_partitus
ENSCPOG00000014729	-	100	92.706	ENSSSCG00000024648	PRPF4	100	92.706	Sus_scrofa
ENSCPOG00000014729	-	95	84.584	ENSTGUG00000002623	PRPF4	100	84.867	Taeniopygia_guttata
ENSCPOG00000014729	-	97	70.356	ENSTRUG00000008853	prpf4	99	70.356	Takifugu_rubripes
ENSCPOG00000014729	-	97	69.307	ENSTNIG00000013250	prpf4	99	69.307	Tetraodon_nigroviridis
ENSCPOG00000014729	-	100	84.674	ENSTBEG00000000821	PRPF4	100	84.674	Tupaia_belangeri
ENSCPOG00000014729	-	73	94.295	ENSTTRG00000003246	PRPF4	85	94.295	Tursiops_truncatus
ENSCPOG00000014729	-	65	90.719	ENSUAMG00000018288	PRPF4	90	90.719	Ursus_americanus
ENSCPOG00000014729	-	100	91.747	ENSUMAG00000019375	PRPF4	100	91.747	Ursus_maritimus
ENSCPOG00000014729	-	100	92.337	ENSVPAG00000005281	PRPF4	100	92.337	Vicugna_pacos
ENSCPOG00000014729	-	100	91.429	ENSVVUG00000002476	PRPF4	100	91.519	Vulpes_vulpes
ENSCPOG00000014729	-	70	55.833	ENSXCOG00000006101	prpf4	93	55.693	Xiphophorus_couchianus
ENSCPOG00000014729	-	89	61.790	ENSXMAG00000002750	prpf4	98	61.431	Xiphophorus_maculatus