EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000014812 (Gene tree)
Gene ID
100734232
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
23726 bases
Position
chrDS562916.1:9148008-9171733
Accession
100734232
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000030221RNA_pol_Rpb1_5PF04998.175.2e-10111
ENSCPOP00000013347RNA_pol_Rpb1_5PF04998.175.5e-10111
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22126
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22226
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22326
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22426
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22526
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22626
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22726
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22826
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-22926
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221026
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221126
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221226
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221326
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221426
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221526
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221626
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221726
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221826
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-221926
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222026
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222126
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222226
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222326
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222426
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222526
ENSCPOP00000030221RNA_pol_Rpb1_RPF05001.133.7e-222626
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17126
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17226
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17326
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17426
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17526
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17626
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17726
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17826
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-17926
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171026
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171126
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171226
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171326
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171426
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171526
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171626
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171726
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171826
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-171926
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172026
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172126
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172226
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172326
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172426
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172526
ENSCPOP00000013347RNA_pol_Rpb1_RPF05001.132.6e-172626
ENSCPOP00000030221RNA_pol_Rpb1_4PF05000.173.2e-3811
ENSCPOP00000013347RNA_pol_Rpb1_4PF05000.173.4e-3811
ENSCPOP00000030221RNA_pol_Rpb1_2PF00623.209.3e-7511
ENSCPOP00000013347RNA_pol_Rpb1_2PF00623.209.8e-7511
ENSCPOP00000030221RNA_pol_Rpb1_3PF04983.184.4e-5011
ENSCPOP00000013347RNA_pol_Rpb1_3PF04983.184.6e-5011
ENSCPOP00000030221RNA_pol_Rpb1_1PF04997.124.3e-10911
ENSCPOP00000013347RNA_pol_Rpb1_1PF04997.124.5e-10911
ENSCPOP00000030221RNA_pol_Rpb1_7PF04990.121.9e-5411
ENSCPOP00000013347RNA_pol_Rpb1_7PF04990.122e-5411
ENSCPOP00000030221RNA_pol_Rpb1_6PF04992.147.2e-6911
ENSCPOP00000013347RNA_pol_Rpb1_6PF04992.147.5e-6911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000032435-5388-ENSCPOP000000302211795 (aa)-A0A286XXC8
ENSCPOT00000014957-5502XM_005002151ENSCPOP000000133471833 (aa)XP_005002208H0VRW6
Gene Model
Click here to download ENSCPOG00000014812's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014812's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000014812-5538.462ENSCPOG00000012350POLR1A7738.462
ENSCPOG00000014812-7338.656ENSCPOG00000022387POLR3A9138.656
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000014812-9393.304ENSAPOG00000006552polr2a9290.275Acanthochromis_polyacanthus
ENSCPOG00000014812-9898.326ENSAMEG00000016265-10095.472Ailuropoda_melanoleuca
ENSCPOG00000014812-9993.587ENSACIG00000015982polr2a9987.849Amphilophus_citrinellus
ENSCPOG00000014812-9793.366ENSAOCG00000004255polr2a9990.944Amphiprion_ocellaris
ENSCPOG00000014812-10093.366ENSAPEG00000012623polr2a9988.931Amphiprion_percula
ENSCPOG00000014812-10093.242ENSATEG00000019644polr2a9988.822Anabas_testudineus
ENSCPOG00000014812-9896.770ENSACAG00000014561POLR2A10094.098Anolis_carolinensis
ENSCPOG00000014812-9998.537ENSANAG00000020093-10095.683Aotus_nancymaae
ENSCPOG00000014812-10093.056ENSACLG00000006735polr2a9988.659Astatotilapia_calliptera
ENSCPOG00000014812-10093.614ENSAMXG00000020046polr2a9989.040Astyanax_mexicanus
ENSCPOG00000014812-9898.571ENSBTAG00000046765POLR2A10095.683Bos_taurus
ENSCPOG00000014812-9970.167WBGene00000123ama-19969.291Caenorhabditis_elegans
ENSCPOG00000014812-9898.634ENSCAFG00000016532POLR2A9999.808Canis_familiaris
ENSCPOG00000014812-9997.774ENSCAFG00020007929-10094.531Canis_lupus_dingo
ENSCPOG00000014812-9898.571ENSCHIG00000027173-10095.683Capra_hircus
ENSCPOG00000014812-9998.537ENSTSYG00000012803-10095.201Carlito_syrichta
ENSCPOG00000014812-9899.889ENSCAPG00000001882-10099.889Cavia_aperea
ENSCPOG00000014812-9998.537ENSCCAG00000020938-10095.683Cebus_capucinus
ENSCPOG00000014812-9997.646ENSCATG00000013680-10095.628Cercocebus_atys
ENSCPOG00000014812-9998.728ENSCLAG00000012196-10095.847Chinchilla_lanigera
ENSCPOG00000014812-9889.321ENSCSAG00000011644-10087.174Chlorocebus_sabaeus
ENSCPOG00000014812-9991.302ENSCPBG00000012697POLR2A10091.302Chrysemys_picta_bellii
ENSCPOG00000014812-9973.384ENSCING00000007884-9777.628Ciona_intestinalis
ENSCPOG00000014812-9875.799ENSCSAVG00000008334-9980.180Ciona_savignyi
ENSCPOG00000014812-9996.725ENSCANG00000010622-10094.918Colobus_angolensis_palliatus
ENSCPOG00000014812-9993.270ENSCGRG00001003538Polr2a10091.197Cricetulus_griseus_chok1gshd
ENSCPOG00000014812-8895.143ENSCGRG00000012105Polr2a9891.569Cricetulus_griseus_crigri
ENSCPOG00000014812-10092.684ENSCSEG00000002635polr2a10088.332Cynoglossus_semilaevis
ENSCPOG00000014812-10093.490ENSCVAG00000005156polr2a9988.986Cyprinodon_variegatus
ENSCPOG00000014812-10093.325ENSDARG00000099966polr2a9988.470Danio_rerio
ENSCPOG00000014812-9992.653ENSDNOG00000016482-10092.653Dasypus_novemcinctus
ENSCPOG00000014812-9998.537ENSDORG00000008667Polr2a10095.683Dipodomys_ordii
ENSCPOG00000014812-9969.519FBgn0003277RpII2159775.627Drosophila_melanogaster
ENSCPOG00000014812-9491.795ENSETEG00000002540-8795.625Echinops_telfairi
ENSCPOG00000014812-9785.866ENSEBUG00000013967polr2a9984.136Eptatretus_burgeri
ENSCPOG00000014812-9796.460ENSEASG00005019114-10093.825Equus_asinus_asinus
ENSCPOG00000014812-9898.509ENSECAG00000018485POLR2A10095.628Equus_caballus
ENSCPOG00000014812-8999.533ENSEEUG00000001154-9599.533Erinaceus_europaeus
ENSCPOG00000014812-8891.866ENSELUG00000014284polr2a8992.783Esox_lucius
ENSCPOG00000014812-9997.727ENSFDAG00000008287-10095.628Fukomys_damarensis
ENSCPOG00000014812-9993.490ENSFHEG00000001768polr2a10091.093Fundulus_heteroclitus
ENSCPOG00000014812-9989.880ENSGMOG00000007725polr2a10092.962Gadus_morhua
ENSCPOG00000014812-10094.366ENSGAFG00000005389polr2a9992.141Gambusia_affinis
ENSCPOG00000014812-9990.629ENSGACG00000019366polr2a10093.081Gasterosteus_aculeatus
ENSCPOG00000014812-9995.438ENSGGOG00000014800-9697.868Gorilla_gorilla
ENSCPOG00000014812-9793.056ENSHBUG00000018937polr2a9990.710Haplochromis_burtoni
ENSCPOG00000014812-9998.473ENSHGLG00000012381POLR2A10095.628Heterocephalus_glaber_female
ENSCPOG00000014812-9998.473ENSHGLG00100014843POLR2A10095.628Heterocephalus_glaber_male
ENSCPOG00000014812-10092.870ENSHCOG00000011874polr2a9988.634Hippocampus_comes
ENSCPOG00000014812-10092.994ENSIPUG00000002613Polr2a9988.495Ictalurus_punctatus
ENSCPOG00000014812-9998.537ENSSTOG00000001304-10095.683Ictidomys_tridecemlineatus
ENSCPOG00000014812-9998.410ENSJJAG00000013049Polr2a10095.574Jaculus_jaculus
ENSCPOG00000014812-8685.110ENSKMAG00000016343polr2a8689.286Kryptolebias_marmoratus
ENSCPOG00000014812-10092.994ENSLBEG00000027652polr2a10088.604Labrus_bergylta
ENSCPOG00000014812-9894.805ENSLACG00000012071POLR2A10096.970Latimeria_chalumnae
ENSCPOG00000014812-9891.198ENSLOCG00000013863polr2a9794.700Lepisosteus_oculatus
ENSCPOG00000014812-10096.872ENSLAFG00000008626-10095.628Loxodonta_africana
ENSCPOG00000014812-5598.059ENSMFAG00000007042-9998.059Macaca_fascicularis
ENSCPOG00000014812-9998.473ENSMMUG00000023620-10095.628Macaca_mulatta
ENSCPOG00000014812-9998.028ENSMNEG00000040407-10094.962Macaca_nemestrina
ENSCPOG00000014812-9992.298ENSMLEG00000030263-9998.059Mandrillus_leucophaeus
ENSCPOG00000014812-10093.118ENSMAMG00000003351polr2a9988.713Mastacembelus_armatus
ENSCPOG00000014812-10093.056ENSMZEG00005021429polr2a9988.659Maylandia_zebra
ENSCPOG00000014812-5599.592ENSMAUG00000021055-9999.592Mesocricetus_auratus
ENSCPOG00000014812-9997.521ENSMICG00000013372-9898.465Microcebus_murinus
ENSCPOG00000014812-10093.700ENSMOCG00000018279Polr2a10092.050Microtus_ochrogaster
ENSCPOG00000014812-9092.622ENSMMOG00000012515polr2a9690.328Mola_mola
ENSCPOG00000014812-9898.075ENSMODG00000007009-10095.246Monodelphis_domestica
ENSCPOG00000014812-9893.255ENSMALG00000008716polr2a9989.076Monopterus_albus
ENSCPOG00000014812-9998.537MGP_CAROLIEiJ_G0016587Polr2a10095.683Mus_caroli
ENSCPOG00000014812-9998.537ENSMUSG00000005198Polr2a10095.683Mus_musculus
ENSCPOG00000014812-9896.351MGP_PahariEiJ_G0017718Polr2a10093.740Mus_pahari
ENSCPOG00000014812-9998.537MGP_SPRETEiJ_G0017423Polr2a10095.683Mus_spretus
ENSCPOG00000014812-9898.571ENSMPUG00000009648-10095.683Mustela_putorius_furo
ENSCPOG00000014812-9897.953ENSMLUG00000009088-10095.142Myotis_lucifugus
ENSCPOG00000014812-9998.537ENSNGAG00000002543Polr2a10095.683Nannospalax_galili
ENSCPOG00000014812-9993.270ENSNBRG00000002005polr2a9987.630Neolamprologus_brichardi
ENSCPOG00000014812-9998.537ENSNLEG00000009460-10095.201Nomascus_leucogenys
ENSCPOG00000014812-9799.346ENSMEUG00000008611-9699.346Notamacropus_eugenii
ENSCPOG00000014812-8699.557ENSOPRG00000015116-9999.557Ochotona_princeps
ENSCPOG00000014812-9799.933ENSODEG00000017674-10094.101Octodon_degus
ENSCPOG00000014812-10093.242ENSONIG00000009231polr2a9988.822Oreochromis_niloticus
ENSCPOG00000014812-5297.854ENSOANG00000003303-9897.854Ornithorhynchus_anatinus
ENSCPOG00000014812-9996.381ENSOCUG00000017929-10096.805Oryctolagus_cuniculus
ENSCPOG00000014812-10093.118ENSORLG00000006431polr2a9988.659Oryzias_latipes
ENSCPOG00000014812-10093.118ENSORLG00020010235polr2a9988.659Oryzias_latipes_hni
ENSCPOG00000014812-10093.118ENSORLG00015007075polr2a9988.659Oryzias_latipes_hsok
ENSCPOG00000014812-9893.292ENSOMEG00000010713polr2a9894.303Oryzias_melastigma
ENSCPOG00000014812-9898.385ENSOGAG00000033608-10095.519Otolemur_garnettii
ENSCPOG00000014812-9098.571ENSOARG00000013874-9995.683Ovis_aries
ENSCPOG00000014812-9998.848ENSPPAG00000043734-10094.799Pan_paniscus
ENSCPOG00000014812-9998.537ENSPTRG00000008691POLR2A10095.201Pan_troglodytes
ENSCPOG00000014812-9997.646ENSPANG00000024099-10094.918Papio_anubis
ENSCPOG00000014812-8492.528ENSPKIG00000005727polr2a8592.689Paramormyrops_kingsleyae
ENSCPOG00000014812-9894.813ENSPSIG00000014006POLR2A10094.813Pelodiscus_sinensis
ENSCPOG00000014812-10092.813ENSPMGG00000019734polr2a9994.565Periophthalmus_magnuspinnatus
ENSCPOG00000014812-9998.537ENSPEMG00000012521Polr2a10095.683Peromyscus_maniculatus_bairdii
ENSCPOG00000014812-8898.263ENSPCIG00000028851-8298.263Phascolarctos_cinereus
ENSCPOG00000014812-9193.428ENSPFOG00000007890polr2a9991.038Poecilia_formosa
ENSCPOG00000014812-9193.428ENSPLAG00000007399polr2a9991.038Poecilia_latipinna
ENSCPOG00000014812-9193.524ENSPMEG00000002071polr2a9991.071Poecilia_mexicana
ENSCPOG00000014812-10093.366ENSPREG00000013122polr2a9988.877Poecilia_reticulata
ENSCPOG00000014812-9898.571ENSPPYG00000007924-10094.262Pongo_abelii
ENSCPOG00000014812-9199.737ENSPCAG00000006951-9299.737Procavia_capensis
ENSCPOG00000014812-9998.473ENSPCOG00000025260-10095.145Propithecus_coquereli
ENSCPOG00000014812-9898.261ENSPVAG00000005069-10095.410Pteropus_vampyrus
ENSCPOG00000014812-10093.118ENSPNYG00000022340polr2a9988.713Pundamilia_nyererei
ENSCPOG00000014812-10093.428ENSPNAG00000011237polr2a9988.986Pygocentrus_nattereri
ENSCPOG00000014812-9898.634ENSRNOG00000028834Polr2a10095.738Rattus_norvegicus
ENSCPOG00000014812-9998.473ENSRBIG00000002471-10094.911Rhinopithecus_bieti
ENSCPOG00000014812-9898.509ENSRROG00000029583-10095.529Rhinopithecus_roxellana
ENSCPOG00000014812-8851.619YDL140CRPO219980.180Saccharomyces_cerevisiae
ENSCPOG00000014812-9998.537ENSSBOG00000000808-10095.683Saimiri_boliviensis_boliviensis
ENSCPOG00000014812-9798.075ENSSHAG00000002858-10095.246Sarcophilus_harrisii
ENSCPOG00000014812-9993.587ENSSFOG00015023275polr2a10088.986Scleropages_formosus
ENSCPOG00000014812-10092.746ENSSMAG00000009137polr2a9990.349Scophthalmus_maximus
ENSCPOG00000014812-10093.242ENSSDUG00000020466polr2a9988.822Seriola_dumerili
ENSCPOG00000014812-10093.242ENSSLDG00000020613polr2a9988.822Seriola_lalandi_dorsalis
ENSCPOG00000014812-9893.167ENSSARG00000005875-9993.441Sorex_araneus
ENSCPOG00000014812-10093.304ENSSPAG00000016741polr2a9494.249Stegastes_partitus
ENSCPOG00000014812-9897.640ENSSSCG00000028278-10094.863Sus_scrofa
ENSCPOG00000014812-9987.392ENSTRUG00000012320polr2a8188.250Takifugu_rubripes
ENSCPOG00000014812-9191.754ENSTNIG00000010136polr2a9992.652Tetraodon_nigroviridis
ENSCPOG00000014812-75100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSCPOG00000014812-9896.646ENSTTRG00000014273-10093.607Tursiops_truncatus
ENSCPOG00000014812-10091.516ENSUAMG00000014866-10094.940Ursus_americanus
ENSCPOG00000014812-92100.000ENSUMAG00000015732-99100.000Ursus_maritimus
ENSCPOG00000014812-63100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSCPOG00000014812-9898.634ENSVVUG00000027878-10095.126Vulpes_vulpes
ENSCPOG00000014812-9998.758ENSXETG00000012465polr2a10095.536Xenopus_tropicalis
ENSCPOG00000014812-9292.105ENSXCOG00000001804polr2a9991.606Xiphophorus_couchianus
ENSCPOG00000014812-10093.366ENSXMAG00000015687polr2a9988.877Xiphophorus_maculatus

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