EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014833 (Gene tree)
Gene ID: 100715132
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 9974 bases
Position: chrDS562887.1:20160857-20170830
Accession: 100715132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000013366	AARP2CN	PF08142.12	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000014978	TSR1-201	2738	XM_003469532	ENSCPOP00000013366	752 (aa)	XP_003469580	H0VRY5

Gene Model

Click here to download ENSCPOG00000014833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014833	TSR1	99	86.364	ENSG00000167721	TSR1	93	87.032	Homo_sapiens
ENSCPOG00000014833	TSR1	99	54.275	ENSAPOG00000020891	tsr1	92	54.404	Acanthochromis_polyacanthus
ENSCPOG00000014833	TSR1	99	85.714	ENSAMEG00000007599	TSR1	92	85.317	Ailuropoda_melanoleuca
ENSCPOG00000014833	TSR1	99	56.101	ENSACIG00000007090	tsr1	92	56.011	Amphilophus_citrinellus
ENSCPOG00000014833	TSR1	99	54.663	ENSAOCG00000023284	tsr1	92	54.688	Amphiprion_ocellaris
ENSCPOG00000014833	TSR1	92	54.834	ENSAPEG00000008452	tsr1	93	54.861	Amphiprion_percula
ENSCPOG00000014833	TSR1	99	53.737	ENSATEG00000021961	tsr1	92	54.510	Anabas_testudineus
ENSCPOG00000014833	TSR1	90	67.054	ENSAPLG00000013422	TSR1	92	68.029	Anas_platyrhynchos
ENSCPOG00000014833	TSR1	75	56.995	ENSACAG00000000859	TSR1	92	56.649	Anolis_carolinensis
ENSCPOG00000014833	TSR1	99	86.729	ENSANAG00000031071	TSR1	93	87.131	Aotus_nancymaae
ENSCPOG00000014833	TSR1	99	55.339	ENSACLG00000007595	tsr1	92	55.556	Astatotilapia_calliptera
ENSCPOG00000014833	TSR1	54	50.363	ENSAMXG00000008470	tsr1	87	50.847	Astyanax_mexicanus
ENSCPOG00000014833	TSR1	99	88.740	ENSBTAG00000004225	TSR1	93	88.740	Bos_taurus
ENSCPOG00000014833	TSR1	99	38.058	WBGene00006497	tag-151	91	38.008	Caenorhabditis_elegans
ENSCPOG00000014833	TSR1	99	86.863	ENSCJAG00000012456	TSR1	93	86.729	Callithrix_jacchus
ENSCPOG00000014833	TSR1	96	86.226	ENSCAFG00000019273	-	100	86.226	Canis_familiaris
ENSCPOG00000014833	TSR1	99	86.479	ENSCAFG00000002106	-	93	86.479	Canis_familiaris
ENSCPOG00000014833	TSR1	99	86.364	ENSCAFG00020009728	TSR1	93	86.364	Canis_lupus_dingo
ENSCPOG00000014833	TSR1	99	88.874	ENSCHIG00000023935	TSR1	93	88.874	Capra_hircus
ENSCPOG00000014833	TSR1	99	87.265	ENSTSYG00000005468	TSR1	93	86.729	Carlito_syrichta
ENSCPOG00000014833	TSR1	99	87.483	ENSCCAG00000028962	TSR1	98	87.883	Cebus_capucinus
ENSCPOG00000014833	TSR1	99	86.497	ENSCATG00000044262	TSR1	93	86.631	Cercocebus_atys
ENSCPOG00000014833	TSR1	99	91.823	ENSCLAG00000005567	TSR1	93	91.421	Chinchilla_lanigera
ENSCPOG00000014833	TSR1	99	86.497	ENSCSAG00000013788	TSR1	93	86.765	Chlorocebus_sabaeus
ENSCPOG00000014833	TSR1	98	68.237	ENSCPBG00000020363	TSR1	90	68.667	Chrysemys_picta_bellii
ENSCPOG00000014833	TSR1	99	44.299	ENSCING00000020658	-	94	43.931	Ciona_intestinalis
ENSCPOG00000014833	TSR1	99	43.832	ENSCSAVG00000001875	-	96	43.081	Ciona_savignyi
ENSCPOG00000014833	TSR1	99	79.223	ENSCANG00000033056	TSR1	92	75.668	Colobus_angolensis_palliatus
ENSCPOG00000014833	TSR1	99	84.605	ENSCGRG00001023942	Tsr1	93	84.605	Cricetulus_griseus_chok1gshd
ENSCPOG00000014833	TSR1	99	77.346	ENSCGRG00000013015	Tsr1	92	77.748	Cricetulus_griseus_crigri
ENSCPOG00000014833	TSR1	99	54.145	ENSCSEG00000013009	tsr1	92	55.065	Cynoglossus_semilaevis
ENSCPOG00000014833	TSR1	99	54.722	ENSCVAG00000000506	tsr1	92	54.188	Cyprinodon_variegatus
ENSCPOG00000014833	TSR1	99	53.826	ENSDARG00000007744	tsr1	92	54.090	Danio_rerio
ENSCPOG00000014833	TSR1	99	87.936	ENSDNOG00000004715	TSR1	93	86.997	Dasypus_novemcinctus
ENSCPOG00000014833	TSR1	99	85.925	ENSDORG00000016371	-	93	85.925	Dipodomys_ordii
ENSCPOG00000014833	TSR1	99	74.765	ENSDORG00000023234	-	96	74.765	Dipodomys_ordii
ENSCPOG00000014833	TSR1	99	42.950	FBgn0037073	Tsr1	92	43.208	Drosophila_melanogaster
ENSCPOG00000014833	TSR1	90	89.879	ENSETEG00000017534	TSR1	84	89.879	Echinops_telfairi
ENSCPOG00000014833	TSR1	95	52.786	ENSEBUG00000013731	TSR1	91	51.604	Eptatretus_burgeri
ENSCPOG00000014833	TSR1	99	89.008	ENSEASG00005009302	TSR1	90	89.008	Equus_asinus_asinus
ENSCPOG00000014833	TSR1	99	88.874	ENSECAG00000009114	TSR1	93	88.874	Equus_caballus
ENSCPOG00000014833	TSR1	99	53.935	ENSELUG00000020984	tsr1	88	54.026	Esox_lucius
ENSCPOG00000014833	TSR1	99	87.802	ENSFCAG00000006313	TSR1	93	87.802	Felis_catus
ENSCPOG00000014833	TSR1	99	67.686	ENSFALG00000006532	TSR1	92	68.484	Ficedula_albicollis
ENSCPOG00000014833	TSR1	99	89.812	ENSFDAG00000006038	TSR1	93	89.678	Fukomys_damarensis
ENSCPOG00000014833	TSR1	99	53.895	ENSFHEG00000003626	tsr1	92	54.463	Fundulus_heteroclitus
ENSCPOG00000014833	TSR1	99	52.848	ENSGMOG00000010336	tsr1	92	53.377	Gadus_morhua
ENSCPOG00000014833	TSR1	99	54.393	ENSGAFG00000012993	tsr1	92	55.339	Gambusia_affinis
ENSCPOG00000014833	TSR1	99	54.474	ENSGACG00000010843	tsr1	92	55.132	Gasterosteus_aculeatus
ENSCPOG00000014833	TSR1	98	69.054	ENSGAGG00000025619	-	92	68.942	Gopherus_agassizii
ENSCPOG00000014833	TSR1	99	86.898	ENSGGOG00000001704	TSR1	93	87.166	Gorilla_gorilla
ENSCPOG00000014833	TSR1	99	55.123	ENSHBUG00000017904	tsr1	92	56.111	Haplochromis_burtoni
ENSCPOG00000014833	TSR1	96	80.250	ENSHGLG00000015688	-	91	79.555	Heterocephalus_glaber_female
ENSCPOG00000014833	TSR1	99	92.091	ENSHGLG00000012806	-	93	92.091	Heterocephalus_glaber_female
ENSCPOG00000014833	TSR1	99	92.091	ENSHGLG00100015392	TSR1	93	92.091	Heterocephalus_glaber_male
ENSCPOG00000014833	TSR1	99	55.467	ENSHCOG00000001432	tsr1	92	55.467	Hippocampus_comes
ENSCPOG00000014833	TSR1	99	53.756	ENSIPUG00000004618	tsr1	92	54.404	Ictalurus_punctatus
ENSCPOG00000014833	TSR1	99	88.503	ENSSTOG00000011819	TSR1	93	88.503	Ictidomys_tridecemlineatus
ENSCPOG00000014833	TSR1	90	80.294	ENSJJAG00000019505	Tsr1	88	79.529	Jaculus_jaculus
ENSCPOG00000014833	TSR1	99	54.545	ENSKMAG00000005763	tsr1	92	53.846	Kryptolebias_marmoratus
ENSCPOG00000014833	TSR1	99	54.510	ENSLBEG00000021823	tsr1	92	54.922	Labrus_bergylta
ENSCPOG00000014833	TSR1	99	63.624	ENSLACG00000002197	TSR1	92	63.241	Latimeria_chalumnae
ENSCPOG00000014833	TSR1	80	55.538	ENSLOCG00000006491	TSR1	80	57.423	Lepisosteus_oculatus
ENSCPOG00000014833	TSR1	99	86.631	ENSMFAG00000021330	TSR1	93	86.765	Macaca_fascicularis
ENSCPOG00000014833	TSR1	99	86.364	ENSMMUG00000017519	TSR1	93	86.631	Macaca_mulatta
ENSCPOG00000014833	TSR1	99	86.230	ENSMNEG00000031382	TSR1	93	86.364	Macaca_nemestrina
ENSCPOG00000014833	TSR1	99	86.364	ENSMLEG00000036733	TSR1	93	86.497	Mandrillus_leucophaeus
ENSCPOG00000014833	TSR1	99	54.300	ENSMAMG00000017918	tsr1	92	54.768	Mastacembelus_armatus
ENSCPOG00000014833	TSR1	99	54.805	ENSMZEG00005007477	tsr1	92	55.671	Maylandia_zebra
ENSCPOG00000014833	TSR1	99	66.356	ENSMGAG00000005576	TSR1	92	66.755	Meleagris_gallopavo
ENSCPOG00000014833	TSR1	99	88.874	ENSMICG00000012943	TSR1	93	88.874	Microcebus_murinus
ENSCPOG00000014833	TSR1	99	83.668	ENSMOCG00000022764	Tsr1	93	84.471	Microtus_ochrogaster
ENSCPOG00000014833	TSR1	99	54.463	ENSMMOG00000014280	tsr1	92	55.322	Mola_mola
ENSCPOG00000014833	TSR1	99	78.046	ENSMODG00000010658	TSR1	93	77.644	Monodelphis_domestica
ENSCPOG00000014833	TSR1	99	85.523	MGP_CAROLIEiJ_G0016727	Tsr1	93	85.255	Mus_caroli
ENSCPOG00000014833	TSR1	99	85.791	ENSMUSG00000038335	Tsr1	93	85.523	Mus_musculus
ENSCPOG00000014833	TSR1	99	86.059	MGP_PahariEiJ_G0017864	Tsr1	93	85.791	Mus_pahari
ENSCPOG00000014833	TSR1	99	85.925	MGP_SPRETEiJ_G0017570	Tsr1	93	85.657	Mus_spretus
ENSCPOG00000014833	TSR1	79	86.622	ENSMPUG00000013000	TSR1	91	86.622	Mustela_putorius_furo
ENSCPOG00000014833	TSR1	99	89.812	ENSMLUG00000003505	TSR1	93	89.812	Myotis_lucifugus
ENSCPOG00000014833	TSR1	52	74.103	ENSNGAG00000020455	-	97	75.989	Nannospalax_galili
ENSCPOG00000014833	TSR1	99	55.181	ENSNBRG00000020728	tsr1	92	55.137	Neolamprologus_brichardi
ENSCPOG00000014833	TSR1	99	78.016	ENSNLEG00000017184	TSR1	92	79.088	Nomascus_leucogenys
ENSCPOG00000014833	TSR1	96	74.238	ENSMEUG00000015828	TSR1	90	74.309	Notamacropus_eugenii
ENSCPOG00000014833	TSR1	99	55.267	ENSONIG00000013131	tsr1	92	55.890	Oreochromis_niloticus
ENSCPOG00000014833	TSR1	95	71.250	ENSOANG00000008637	TSR1	92	71.250	Ornithorhynchus_anatinus
ENSCPOG00000014833	TSR1	99	87.265	ENSOCUG00000014256	TSR1	93	87.265	Oryctolagus_cuniculus
ENSCPOG00000014833	TSR1	99	54.404	ENSORLG00000004926	tsr1	92	54.226	Oryzias_latipes
ENSCPOG00000014833	TSR1	99	54.475	ENSORLG00020008792	tsr1	92	54.264	Oryzias_latipes_hni
ENSCPOG00000014833	TSR1	99	54.275	ENSORLG00015013838	tsr1	92	54.096	Oryzias_latipes_hsok
ENSCPOG00000014833	TSR1	99	55.199	ENSOMEG00000004830	tsr1	92	55.013	Oryzias_melastigma
ENSCPOG00000014833	TSR1	99	85.790	ENSOGAG00000004492	TSR1	93	85.657	Otolemur_garnettii
ENSCPOG00000014833	TSR1	99	88.740	ENSOARG00000015437	TSR1	90	88.740	Ovis_aries
ENSCPOG00000014833	TSR1	99	86.364	ENSPPAG00000036355	TSR1	93	87.032	Pan_paniscus
ENSCPOG00000014833	TSR1	99	87.668	ENSPPRG00000015519	-	93	87.668	Panthera_pardus
ENSCPOG00000014833	TSR1	99	87.802	ENSPTIG00000010608	TSR1	93	87.802	Panthera_tigris_altaica
ENSCPOG00000014833	TSR1	99	86.364	ENSPTRG00000008547	TSR1	93	87.032	Pan_troglodytes
ENSCPOG00000014833	TSR1	99	83.021	ENSPANG00000024463	TSR1	93	82.086	Papio_anubis
ENSCPOG00000014833	TSR1	99	54.740	ENSPKIG00000013972	tsr1	92	54.339	Paramormyrops_kingsleyae
ENSCPOG00000014833	TSR1	86	68.721	ENSPSIG00000018258	TSR1	92	68.567	Pelodiscus_sinensis
ENSCPOG00000014833	TSR1	99	58.201	ENSPMGG00000011577	tsr1	92	56.972	Periophthalmus_magnuspinnatus
ENSCPOG00000014833	TSR1	99	83.914	ENSPEMG00000018033	Tsr1	93	84.048	Peromyscus_maniculatus_bairdii
ENSCPOG00000014833	TSR1	99	77.674	ENSPCIG00000009357	TSR1	91	78.029	Phascolarctos_cinereus
ENSCPOG00000014833	TSR1	92	54.207	ENSPFOG00000004483	TSR1	92	55.366	Poecilia_formosa
ENSCPOG00000014833	TSR1	99	54.642	ENSPLAG00000022320	tsr1	92	54.907	Poecilia_latipinna
ENSCPOG00000014833	TSR1	99	54.510	ENSPMEG00000004577	tsr1	92	54.522	Poecilia_mexicana
ENSCPOG00000014833	TSR1	99	53.627	ENSPREG00000010354	tsr1	90	54.016	Poecilia_reticulata
ENSCPOG00000014833	TSR1	99	78.961	ENSPPYG00000007792	TSR1	93	78.695	Pongo_abelii
ENSCPOG00000014833	TSR1	56	90.698	ENSPCAG00000012973	-	72	90.698	Procavia_capensis
ENSCPOG00000014833	TSR1	99	88.874	ENSPCOG00000017928	TSR1	99	82.682	Propithecus_coquereli
ENSCPOG00000014833	TSR1	99	87.936	ENSPVAG00000002162	TSR1	93	87.802	Pteropus_vampyrus
ENSCPOG00000014833	TSR1	99	55.469	ENSPNYG00000016163	tsr1	92	55.686	Pundamilia_nyererei
ENSCPOG00000014833	TSR1	99	53.325	ENSPNAG00000008659	tsr1	92	53.935	Pygocentrus_nattereri
ENSCPOG00000014833	TSR1	99	84.203	ENSRNOG00000002980	Tsr1	93	83.936	Rattus_norvegicus
ENSCPOG00000014833	TSR1	99	86.631	ENSRBIG00000040016	TSR1	93	86.364	Rhinopithecus_bieti
ENSCPOG00000014833	TSR1	99	86.497	ENSRROG00000030361	TSR1	93	86.230	Rhinopithecus_roxellana
ENSCPOG00000014833	TSR1	99	86.461	ENSSBOG00000020785	TSR1	93	86.461	Saimiri_boliviensis_boliviensis
ENSCPOG00000014833	TSR1	99	76.533	ENSSHAG00000011394	TSR1	93	76.235	Sarcophilus_harrisii
ENSCPOG00000014833	TSR1	99	55.863	ENSSFOG00015005455	tsr1	92	55.541	Scleropages_formosus
ENSCPOG00000014833	TSR1	99	55.141	ENSSMAG00000009504	tsr1	92	54.780	Scophthalmus_maximus
ENSCPOG00000014833	TSR1	99	55.039	ENSSDUG00000012074	tsr1	92	55.297	Seriola_dumerili
ENSCPOG00000014833	TSR1	99	55.097	ENSSLDG00000002031	tsr1	92	54.663	Seriola_lalandi_dorsalis
ENSCPOG00000014833	TSR1	99	72.788	ENSSARG00000000759	TSR1	93	72.788	Sorex_araneus
ENSCPOG00000014833	TSR1	99	67.109	ENSSPUG00000007042	TSR1	92	67.241	Sphenodon_punctatus
ENSCPOG00000014833	TSR1	99	53.470	ENSSPAG00000021951	tsr1	92	54.581	Stegastes_partitus
ENSCPOG00000014833	TSR1	99	89.008	ENSSSCG00000038534	TSR1	93	89.008	Sus_scrofa
ENSCPOG00000014833	TSR1	90	69.648	ENSTGUG00000005883	TSR1	94	69.941	Taeniopygia_guttata
ENSCPOG00000014833	TSR1	99	55.123	ENSTRUG00000004665	tsr1	92	55.222	Takifugu_rubripes
ENSCPOG00000014833	TSR1	99	55.644	ENSTNIG00000016196	tsr1	93	55.644	Tetraodon_nigroviridis
ENSCPOG00000014833	TSR1	64	95.833	ENSTBEG00000015275	-	60	95.833	Tupaia_belangeri
ENSCPOG00000014833	TSR1	99	88.606	ENSTTRG00000001177	TSR1	93	88.606	Tursiops_truncatus
ENSCPOG00000014833	TSR1	99	86.059	ENSUAMG00000025160	TSR1	99	85.015	Ursus_americanus
ENSCPOG00000014833	TSR1	96	85.773	ENSUMAG00000009294	TSR1	92	85.773	Ursus_maritimus
ENSCPOG00000014833	TSR1	89	84.844	ENSVPAG00000000228	TSR1	100	84.844	Vicugna_pacos
ENSCPOG00000014833	TSR1	99	86.212	ENSVVUG00000021767	TSR1	93	86.212	Vulpes_vulpes
ENSCPOG00000014833	TSR1	99	58.443	ENSXETG00000023797	tsr1	92	59.366	Xenopus_tropicalis
ENSCPOG00000014833	TSR1	99	55.468	ENSXCOG00000009635	tsr1	92	55.863	Xiphophorus_couchianus
ENSCPOG00000014833	TSR1	99	54.734	ENSXMAG00000001397	tsr1	89	54.286	Xiphophorus_maculatus