EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000014931 (Gene tree)
Gene ID: 100727682
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 7182 bases
Position: chrDS562880.1:27800707-27807888
Accession: 100727682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000013455	B3_4	PF03483.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000015077	LRRC47-201	3001	XM_003471469	ENSCPOP00000013455	605 (aa)	XP_003471517	H0VS64

Gene Model

Click here to download ENSCPOG00000014931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000014931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000014931	LRRC47	96	87.479	ENSG00000130764	LRRC47	100	87.307	Homo_sapiens
ENSCPOG00000014931	LRRC47	95	52.166	ENSAPOG00000019553	lrrc47	99	52.513	Acanthochromis_polyacanthus
ENSCPOG00000014931	LRRC47	76	75.435	ENSAMEG00000009152	LRRC47	100	75.435	Ailuropoda_melanoleuca
ENSCPOG00000014931	LRRC47	64	64.083	ENSAPLG00000003167	LRRC47	100	62.435	Anas_platyrhynchos
ENSCPOG00000014931	LRRC47	63	65.963	ENSACAG00000008267	LRRC47	99	66.138	Anolis_carolinensis
ENSCPOG00000014931	LRRC47	96	86.106	ENSANAG00000025576	LRRC47	100	85.935	Aotus_nancymaae
ENSCPOG00000014931	LRRC47	95	81.802	ENSBTAG00000004738	LRRC47	99	82.414	Bos_taurus
ENSCPOG00000014931	LRRC47	95	81.565	ENSCAFG00000019492	LRRC47	99	80.782	Canis_familiaris
ENSCPOG00000014931	LRRC47	96	81.475	ENSCAFG00020009667	LRRC47	99	82.404	Canis_lupus_dingo
ENSCPOG00000014931	LRRC47	100	80.328	ENSCHIG00000022607	LRRC47	100	80.952	Capra_hircus
ENSCPOG00000014931	LRRC47	92	86.176	ENSTSYG00000009326	LRRC47	96	86.176	Carlito_syrichta
ENSCPOG00000014931	LRRC47	62	99.734	ENSCAPG00000016517	LRRC47	100	99.734	Cavia_aperea
ENSCPOG00000014931	LRRC47	96	86.792	ENSCCAG00000024895	LRRC47	100	86.621	Cebus_capucinus
ENSCPOG00000014931	LRRC47	96	88.165	ENSCATG00000029337	LRRC47	100	87.993	Cercocebus_atys
ENSCPOG00000014931	LRRC47	96	92.083	ENSCLAG00000006093	LRRC47	100	92.083	Chinchilla_lanigera
ENSCPOG00000014931	LRRC47	96	88.508	ENSCSAG00000000727	LRRC47	100	88.336	Chlorocebus_sabaeus
ENSCPOG00000014931	LRRC47	96	59.867	ENSCPBG00000019404	LRRC47	99	59.536	Chrysemys_picta_bellii
ENSCPOG00000014931	LRRC47	75	84.382	ENSCANG00000030701	LRRC47	96	84.165	Colobus_angolensis_palliatus
ENSCPOG00000014931	LRRC47	95	85.017	ENSCGRG00001015159	Lrrc47	92	84.122	Cricetulus_griseus_chok1gshd
ENSCPOG00000014931	LRRC47	63	79.420	ENSCGRG00000017336	Lrrc47	100	80.585	Cricetulus_griseus_crigri
ENSCPOG00000014931	LRRC47	95	50.611	ENSCSEG00000006217	lrrc47	95	51.309	Cynoglossus_semilaevis
ENSCPOG00000014931	LRRC47	62	81.383	ENSDORG00000016594	Lrrc47	99	81.915	Dipodomys_ordii
ENSCPOG00000014931	LRRC47	96	83.390	ENSEASG00005021788	LRRC47	100	83.362	Equus_asinus_asinus
ENSCPOG00000014931	LRRC47	95	83.218	ENSECAG00000022472	LRRC47	92	83.249	Equus_caballus
ENSCPOG00000014931	LRRC47	97	51.424	ENSELUG00000017544	lrrc47	99	51.759	Esox_lucius
ENSCPOG00000014931	LRRC47	90	82.267	ENSFCAG00000011632	LRRC47	97	82.396	Felis_catus
ENSCPOG00000014931	LRRC47	75	60.706	ENSFALG00000009631	LRRC47	99	61.098	Ficedula_albicollis
ENSCPOG00000014931	LRRC47	93	51.675	ENSGMOG00000015674	lrrc47	97	51.852	Gadus_morhua
ENSCPOG00000014931	LRRC47	95	60.206	ENSGALG00000050995	LRRC47	100	60.307	Gallus_gallus
ENSCPOG00000014931	LRRC47	95	52.439	ENSGACG00000005550	lrrc47	99	52.696	Gasterosteus_aculeatus
ENSCPOG00000014931	LRRC47	96	62.230	ENSGAGG00000022584	LRRC47	99	61.897	Gopherus_agassizii
ENSCPOG00000014931	LRRC47	96	87.822	ENSGGOG00000015571	LRRC47	100	87.650	Gorilla_gorilla
ENSCPOG00000014931	LRRC47	100	89.091	ENSHGLG00000018278	LRRC47	100	89.091	Heterocephalus_glaber_female
ENSCPOG00000014931	LRRC47	67	87.097	ENSHGLG00100008507	LRRC47	100	87.097	Heterocephalus_glaber_male
ENSCPOG00000014931	LRRC47	95	52.840	ENSHCOG00000006348	lrrc47	97	51.273	Hippocampus_comes
ENSCPOG00000014931	LRRC47	96	87.091	ENSSTOG00000027559	LRRC47	100	87.263	Ictidomys_tridecemlineatus
ENSCPOG00000014931	LRRC47	95	86.609	ENSJJAG00000017474	Lrrc47	99	85.787	Jaculus_jaculus
ENSCPOG00000014931	LRRC47	95	53.114	ENSKMAG00000003414	lrrc47	99	53.114	Kryptolebias_marmoratus
ENSCPOG00000014931	LRRC47	96	82.676	ENSLAFG00000011657	LRRC47	99	83.019	Loxodonta_africana
ENSCPOG00000014931	LRRC47	71	95.631	ENSMFAG00000045730	LRRC47	90	95.631	Macaca_fascicularis
ENSCPOG00000014931	LRRC47	95	88.235	ENSMNEG00000042488	LRRC47	99	87.973	Macaca_nemestrina
ENSCPOG00000014931	LRRC47	74	83.370	ENSMLEG00000043735	LRRC47	91	83.149	Mandrillus_leucophaeus
ENSCPOG00000014931	LRRC47	95	86.538	ENSMAUG00000021337	Lrrc47	98	86.655	Mesocricetus_auratus
ENSCPOG00000014931	LRRC47	96	84.880	ENSMICG00000026816	LRRC47	100	84.391	Microcebus_murinus
ENSCPOG00000014931	LRRC47	96	85.542	ENSMOCG00000021279	Lrrc47	100	86.231	Microtus_ochrogaster
ENSCPOG00000014931	LRRC47	95	51.641	ENSMMOG00000017007	lrrc47	99	51.468	Mola_mola
ENSCPOG00000014931	LRRC47	95	70.957	ENSMODG00000006554	LRRC47	99	70.740	Monodelphis_domestica
ENSCPOG00000014931	LRRC47	100	84.463	MGP_CAROLIEiJ_G0026864	Lrrc47	99	86.379	Mus_caroli
ENSCPOG00000014931	LRRC47	100	84.628	ENSMUSG00000029028	Lrrc47	99	86.552	Mus_musculus
ENSCPOG00000014931	LRRC47	100	83.802	MGP_PahariEiJ_G0029212	Lrrc47	99	86.207	Mus_pahari
ENSCPOG00000014931	LRRC47	100	84.323	MGP_SPRETEiJ_G0027857	Lrrc47	99	86.379	Mus_spretus
ENSCPOG00000014931	LRRC47	62	74.868	ENSMPUG00000007321	LRRC47	75	75.397	Mustela_putorius_furo
ENSCPOG00000014931	LRRC47	95	83.392	ENSNGAG00000022153	Lrrc47	99	83.649	Nannospalax_galili
ENSCPOG00000014931	LRRC47	96	83.877	ENSNLEG00000008131	LRRC47	100	83.705	Nomascus_leucogenys
ENSCPOG00000014931	LRRC47	81	90.593	ENSODEG00000010882	LRRC47	99	90.593	Octodon_degus
ENSCPOG00000014931	LRRC47	92	55.197	ENSORLG00000002532	lrrc47	99	55.197	Oryzias_latipes
ENSCPOG00000014931	LRRC47	95	55.208	ENSORLG00020019601	lrrc47	99	55.208	Oryzias_latipes_hni
ENSCPOG00000014931	LRRC47	95	54.340	ENSORLG00015014040	lrrc47	99	54.340	Oryzias_latipes_hsok
ENSCPOG00000014931	LRRC47	95	54.167	ENSOMEG00000008989	lrrc47	99	54.167	Oryzias_melastigma
ENSCPOG00000014931	LRRC47	96	84.563	ENSOGAG00000001553	LRRC47	100	84.563	Otolemur_garnettii
ENSCPOG00000014931	LRRC47	95	78.336	ENSOARG00000015290	LRRC47	99	78.966	Ovis_aries
ENSCPOG00000014931	LRRC47	94	84.309	ENSPPAG00000036370	-	100	84.075	Pan_paniscus
ENSCPOG00000014931	LRRC47	95	81.629	ENSPPRG00000005261	LRRC47	99	81.756	Panthera_pardus
ENSCPOG00000014931	LRRC47	96	87.650	ENSPTRG00000000068	LRRC47	100	87.479	Pan_troglodytes
ENSCPOG00000014931	LRRC47	96	88.165	ENSPANG00000012437	LRRC47	100	87.993	Papio_anubis
ENSCPOG00000014931	LRRC47	62	64.567	ENSPSIG00000004196	LRRC47	100	64.042	Pelodiscus_sinensis
ENSCPOG00000014931	LRRC47	62	82.447	ENSPEMG00000021068	Lrrc47	100	82.713	Peromyscus_maniculatus_bairdii
ENSCPOG00000014931	LRRC47	95	71.678	ENSPCIG00000003638	LRRC47	100	73.208	Phascolarctos_cinereus
ENSCPOG00000014931	LRRC47	88	55.660	ENSPFOG00000000992	lrrc47	93	55.660	Poecilia_formosa
ENSCPOG00000014931	LRRC47	95	54.450	ENSPLAG00000008077	lrrc47	99	54.450	Poecilia_latipinna
ENSCPOG00000014931	LRRC47	95	54.087	ENSPMEG00000007367	lrrc47	99	54.101	Poecilia_mexicana
ENSCPOG00000014931	LRRC47	96	87.822	ENSPPYG00000001960	LRRC47	100	87.650	Pongo_abelii
ENSCPOG00000014931	LRRC47	95	86.308	ENSPCOG00000019161	LRRC47	99	85.026	Propithecus_coquereli
ENSCPOG00000014931	LRRC47	96	80.789	ENSPVAG00000009839	LRRC47	100	81.849	Pteropus_vampyrus
ENSCPOG00000014931	LRRC47	96	53.333	ENSPNAG00000017982	lrrc47	100	53.162	Pygocentrus_nattereri
ENSCPOG00000014931	LRRC47	96	85.862	ENSRNOG00000024796	Lrrc47	99	86.552	Rattus_norvegicus
ENSCPOG00000014931	LRRC47	96	88.336	ENSRBIG00000019437	LRRC47	100	88.165	Rhinopithecus_bieti
ENSCPOG00000014931	LRRC47	96	88.336	ENSRROG00000043182	LRRC47	100	88.165	Rhinopithecus_roxellana
ENSCPOG00000014931	LRRC47	90	81.723	ENSSBOG00000026334	LRRC47	97	81.684	Saimiri_boliviensis_boliviensis
ENSCPOG00000014931	LRRC47	95	58.935	ENSSHAG00000007360	LRRC47	99	60.406	Sarcophilus_harrisii
ENSCPOG00000014931	LRRC47	95	53.043	ENSSMAG00000009344	lrrc47	99	53.739	Scophthalmus_maximus
ENSCPOG00000014931	LRRC47	93	53.004	ENSSDUG00000014618	lrrc47	99	52.759	Seriola_dumerili
ENSCPOG00000014931	LRRC47	95	53.391	ENSSLDG00000018908	lrrc47	99	53.391	Seriola_lalandi_dorsalis
ENSCPOG00000014931	LRRC47	95	61.158	ENSSPUG00000010277	LRRC47	99	60.708	Sphenodon_punctatus
ENSCPOG00000014931	LRRC47	95	54.419	ENSSPAG00000005188	lrrc47	99	54.766	Stegastes_partitus
ENSCPOG00000014931	LRRC47	96	81.443	ENSSSCG00000039516	LRRC47	99	82.272	Sus_scrofa
ENSCPOG00000014931	LRRC47	67	63.725	ENSTGUG00000002737	LRRC47	99	62.654	Taeniopygia_guttata
ENSCPOG00000014931	LRRC47	95	52.091	ENSTRUG00000017696	lrrc47	99	51.916	Takifugu_rubripes
ENSCPOG00000014931	LRRC47	95	51.742	ENSTNIG00000010923	lrrc47	99	51.742	Tetraodon_nigroviridis
ENSCPOG00000014931	LRRC47	96	80.822	ENSTTRG00000011751	LRRC47	100	81.475	Tursiops_truncatus
ENSCPOG00000014931	LRRC47	85	80.507	ENSUAMG00000012080	LRRC47	97	80.897	Ursus_americanus
ENSCPOG00000014931	LRRC47	63	75.066	ENSUMAG00000010781	LRRC47	81	75.591	Ursus_maritimus
ENSCPOG00000014931	LRRC47	96	74.150	ENSVVUG00000027118	LRRC47	99	72.432	Vulpes_vulpes
ENSCPOG00000014931	LRRC47	96	59.348	ENSXETG00000006029	lrrc47	99	59.005	Xenopus_tropicalis
ENSCPOG00000014931	LRRC47	95	54.021	ENSXCOG00000002813	lrrc47	98	54.545	Xiphophorus_couchianus
ENSCPOG00000014931	LRRC47	95	53.927	ENSXMAG00000019386	lrrc47	99	54.044	Xiphophorus_maculatus