EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000015001 (Gene tree)
Gene ID: 100712980
Gene Symbol: -
Alias: 39K2
Full Name: staufen double-stranded RNA binding protein 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 257701 bases
Position: chrDS562855.1:39339285-39596985
Accession: 100712980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000029884	dsrm	PF00035.26	6.6e-46	1	4
ENSCPOP00000029884	dsrm	PF00035.26	6.6e-46	2	4
ENSCPOP00000029884	dsrm	PF00035.26	6.6e-46	3	4
ENSCPOP00000029884	dsrm	PF00035.26	6.6e-46	4	4
ENSCPOP00000013518	dsrm	PF00035.26	9.5e-46	1	4
ENSCPOP00000013518	dsrm	PF00035.26	9.5e-46	2	4
ENSCPOP00000013518	dsrm	PF00035.26	9.5e-46	3	4
ENSCPOP00000013518	dsrm	PF00035.26	9.5e-46	4	4
ENSCPOP00000024125	dsrm	PF00035.26	3e-39	1	3
ENSCPOP00000024125	dsrm	PF00035.26	3e-39	2	3
ENSCPOP00000024125	dsrm	PF00035.26	3e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039657	-	1686	-	ENSCPOP00000024125	479 (aa)	-	A0A286XFD7
ENSCPOT00000015147	-	1713	XM_013143906	ENSCPOP00000013518	570 (aa)	XP_012999360	H0VSC1
ENSCPOT00000035294	-	1638	XM_013143910	ENSCPOP00000029884	511 (aa)	XP_012999364	A0A286XX82

Gene Model

Click here to download ENSCPOG00000015001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000015001	-	84	52.123	ENSCPOG00000005566	STAU1	85	51.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015001	-	100	98.121	ENSG00000040341	STAU2	100	100.000	Homo_sapiens
ENSCPOG00000015001	-	100	70.833	ENSAPOG00000002892	stau2	87	66.553	Acanthochromis_polyacanthus
ENSCPOG00000015001	-	100	98.239	ENSAMEG00000001864	STAU2	100	96.316	Ailuropoda_melanoleuca
ENSCPOG00000015001	-	100	71.023	ENSACIG00000000839	stau2	100	63.840	Amphilophus_citrinellus
ENSCPOG00000015001	-	100	70.833	ENSAOCG00000013358	stau2	87	66.553	Amphiprion_ocellaris
ENSCPOG00000015001	-	100	70.833	ENSAPEG00000022162	stau2	87	66.553	Amphiprion_percula
ENSCPOG00000015001	-	100	69.434	ENSATEG00000013484	stau2	100	66.044	Anabas_testudineus
ENSCPOG00000015001	-	100	87.084	ENSAPLG00000005175	STAU2	81	86.576	Anas_platyrhynchos
ENSCPOG00000015001	-	99	77.843	ENSACAG00000012977	STAU2	95	78.132	Anolis_carolinensis
ENSCPOG00000015001	-	100	98.330	ENSANAG00000023588	STAU2	99	97.694	Aotus_nancymaae
ENSCPOG00000015001	-	100	70.644	ENSACLG00000024336	stau2	100	67.973	Astatotilapia_calliptera
ENSCPOG00000015001	-	100	75.147	ENSAMXG00000000460	stau2	89	73.684	Astyanax_mexicanus
ENSCPOG00000015001	-	100	98.956	ENSBTAG00000002076	STAU2	99	96.067	Bos_taurus
ENSCPOG00000015001	-	100	98.330	ENSCJAG00000007632	STAU2	100	96.667	Callithrix_jacchus
ENSCPOG00000015001	-	99	97.034	ENSCJAG00000009484	-	100	93.697	Callithrix_jacchus
ENSCPOG00000015001	-	100	98.239	ENSCAFG00000008077	STAU2	100	96.140	Canis_familiaris
ENSCPOG00000015001	-	100	99.165	ENSCAFG00020017809	STAU2	99	96.442	Canis_lupus_dingo
ENSCPOG00000015001	-	100	98.747	ENSCHIG00000012254	STAU2	99	96.067	Capra_hircus
ENSCPOG00000015001	-	100	82.975	ENSTSYG00000034361	-	95	89.474	Carlito_syrichta
ENSCPOG00000015001	-	75	98.140	ENSTSYG00000005247	-	100	98.140	Carlito_syrichta
ENSCPOG00000015001	-	99	83.789	ENSCAPG00000017061	-	98	83.789	Cavia_aperea
ENSCPOG00000015001	-	100	98.539	ENSCCAG00000035053	-	100	96.491	Cebus_capucinus
ENSCPOG00000015001	-	100	71.820	ENSCATG00000031335	-	99	71.429	Cercocebus_atys
ENSCPOG00000015001	-	100	98.330	ENSCATG00000044825	STAU2	100	98.330	Cercocebus_atys
ENSCPOG00000015001	-	100	98.747	ENSCLAG00000001824	STAU2	100	98.747	Chinchilla_lanigera
ENSCPOG00000015001	-	100	97.456	ENSCSAG00000013572	-	93	97.456	Chlorocebus_sabaeus
ENSCPOG00000015001	-	99	79.216	ENSCHOG00000010590	STAU2	100	74.386	Choloepus_hoffmanni
ENSCPOG00000015001	-	100	86.497	ENSCPBG00000006987	STAU2	89	84.561	Chrysemys_picta_bellii
ENSCPOG00000015001	-	75	97.209	ENSCANG00000039699	-	100	97.209	Colobus_angolensis_palliatus
ENSCPOG00000015001	-	100	69.863	ENSCANG00000031540	-	99	72.586	Colobus_angolensis_palliatus
ENSCPOG00000015001	-	100	96.868	ENSCGRG00001006522	Stau2	100	95.263	Cricetulus_griseus_chok1gshd
ENSCPOG00000015001	-	97	91.900	ENSCGRG00000007511	Stau2	99	91.900	Cricetulus_griseus_crigri
ENSCPOG00000015001	-	100	66.417	ENSCSEG00000010050	stau2	87	62.564	Cynoglossus_semilaevis
ENSCPOG00000015001	-	100	68.972	ENSCVAG00000009893	stau2	87	65.313	Cyprinodon_variegatus
ENSCPOG00000015001	-	100	75.538	ENSDARG00000026801	stau2	89	68.914	Danio_rerio
ENSCPOG00000015001	-	100	97.286	ENSDNOG00000039875	STAU2	100	95.263	Dasypus_novemcinctus
ENSCPOG00000015001	-	100	98.330	ENSDORG00000014308	Stau2	100	98.330	Dipodomys_ordii
ENSCPOG00000015001	-	100	88.258	ENSETEG00000009087	STAU2	100	86.667	Echinops_telfairi
ENSCPOG00000015001	-	81	37.313	ENSEBUG00000006591	STAU2	88	37.313	Eptatretus_burgeri
ENSCPOG00000015001	-	100	98.330	ENSEASG00005020174	STAU2	97	95.439	Equus_asinus_asinus
ENSCPOG00000015001	-	100	98.539	ENSECAG00000000260	STAU2	100	89.638	Equus_caballus
ENSCPOG00000015001	-	99	97.257	ENSEEUG00000015102	STAU2	100	94.035	Erinaceus_europaeus
ENSCPOG00000015001	-	100	71.291	ENSELUG00000006988	stau2	88	71.017	Esox_lucius
ENSCPOG00000015001	-	100	99.165	ENSFCAG00000004917	STAU2	97	99.156	Felis_catus
ENSCPOG00000015001	-	100	86.497	ENSFALG00000008552	STAU2	89	79.112	Ficedula_albicollis
ENSCPOG00000015001	-	100	99.217	ENSFDAG00000005157	STAU2	100	99.217	Fukomys_damarensis
ENSCPOG00000015001	-	72	73.623	ENSFHEG00000018386	stau2	86	73.623	Fundulus_heteroclitus
ENSCPOG00000015001	-	80	76.098	ENSGMOG00000005428	stau2	67	76.098	Gadus_morhua
ENSCPOG00000015001	-	100	86.888	ENSGALG00000031390	STAU2	100	79.605	Gallus_gallus
ENSCPOG00000015001	-	100	69.376	ENSGAFG00000008442	stau2	89	65.744	Gambusia_affinis
ENSCPOG00000015001	-	100	71.648	ENSGACG00000002757	stau2	100	63.826	Gasterosteus_aculeatus
ENSCPOG00000015001	-	100	86.301	ENSGAGG00000003794	STAU2	96	78.223	Gopherus_agassizii
ENSCPOG00000015001	-	100	98.330	ENSGGOG00000026508	STAU2	100	98.330	Gorilla_gorilla
ENSCPOG00000015001	-	61	71.821	ENSGGOG00000036979	-	100	71.821	Gorilla_gorilla
ENSCPOG00000015001	-	100	70.644	ENSHBUG00000020209	stau2	100	67.973	Haplochromis_burtoni
ENSCPOG00000015001	-	100	99.022	ENSHGLG00000014888	STAU2	100	98.246	Heterocephalus_glaber_female
ENSCPOG00000015001	-	100	99.022	ENSHGLG00100005337	STAU2	100	98.246	Heterocephalus_glaber_male
ENSCPOG00000015001	-	100	69.981	ENSHCOG00000004724	stau2	91	69.856	Hippocampus_comes
ENSCPOG00000015001	-	100	70.250	ENSIPUG00000009105	stau2	100	67.759	Ictalurus_punctatus
ENSCPOG00000015001	-	100	98.747	ENSSTOG00000011076	STAU2	99	97.753	Ictidomys_tridecemlineatus
ENSCPOG00000015001	-	100	97.456	ENSJJAG00000020228	Stau2	100	97.456	Jaculus_jaculus
ENSCPOG00000015001	-	100	70.998	ENSKMAG00000006853	stau2	87	65.928	Kryptolebias_marmoratus
ENSCPOG00000015001	-	100	71.930	ENSLBEG00000014492	stau2	100	69.056	Labrus_bergylta
ENSCPOG00000015001	-	100	79.924	ENSLACG00000006873	STAU2	95	73.671	Latimeria_chalumnae
ENSCPOG00000015001	-	100	63.462	ENSLOCG00000003717	stau2	82	63.077	Lepisosteus_oculatus
ENSCPOG00000015001	-	100	98.239	ENSLAFG00000013327	STAU2	100	96.667	Loxodonta_africana
ENSCPOG00000015001	-	99	76.582	ENSMFAG00000037793	-	99	77.882	Macaca_fascicularis
ENSCPOG00000015001	-	100	98.121	ENSMFAG00000044834	STAU2	100	98.121	Macaca_fascicularis
ENSCPOG00000015001	-	100	76.132	ENSMMUG00000048014	-	100	76.132	Macaca_mulatta
ENSCPOG00000015001	-	100	98.121	ENSMMUG00000021588	-	100	98.121	Macaca_mulatta
ENSCPOG00000015001	-	61	81.787	ENSMNEG00000004012	-	98	80.887	Macaca_nemestrina
ENSCPOG00000015001	-	100	98.330	ENSMNEG00000035325	STAU2	100	98.330	Macaca_nemestrina
ENSCPOG00000015001	-	96	78.091	ENSMLEG00000034013	-	98	79.545	Mandrillus_leucophaeus
ENSCPOG00000015001	-	100	98.121	ENSMLEG00000044427	STAU2	100	98.121	Mandrillus_leucophaeus
ENSCPOG00000015001	-	100	70.433	ENSMAMG00000023036	stau2	100	67.121	Mastacembelus_armatus
ENSCPOG00000015001	-	100	70.644	ENSMZEG00005021462	stau2	100	67.973	Maylandia_zebra
ENSCPOG00000015001	-	100	87.280	ENSMGAG00000011523	STAU2	81	87.280	Meleagris_gallopavo
ENSCPOG00000015001	-	100	80.877	ENSMAUG00000021644	Stau2	99	86.585	Mesocricetus_auratus
ENSCPOG00000015001	-	82	93.079	ENSMICG00000032397	-	97	95.745	Microcebus_murinus
ENSCPOG00000015001	-	100	97.495	ENSMICG00000002886	-	99	95.660	Microcebus_murinus
ENSCPOG00000015001	-	100	93.319	ENSMOCG00000001037	Stau2	100	96.907	Microtus_ochrogaster
ENSCPOG00000015001	-	100	71.078	ENSMMOG00000003579	stau2	100	68.089	Mola_mola
ENSCPOG00000015001	-	65	78.457	ENSMODG00000007112	-	100	78.457	Monodelphis_domestica
ENSCPOG00000015001	-	100	66.981	ENSMALG00000001524	stau2	93	67.329	Monopterus_albus
ENSCPOG00000015001	-	100	96.451	MGP_CAROLIEiJ_G0013967	Stau2	100	96.907	Mus_caroli
ENSCPOG00000015001	-	100	96.451	ENSMUSG00000025920	Stau2	100	96.907	Mus_musculus
ENSCPOG00000015001	-	100	95.616	MGP_PahariEiJ_G0023852	Stau2	100	95.833	Mus_pahari
ENSCPOG00000015001	-	100	96.451	MGP_SPRETEiJ_G0014772	Stau2	100	96.907	Mus_spretus
ENSCPOG00000015001	-	100	98.239	ENSMPUG00000010221	STAU2	100	90.296	Mustela_putorius_furo
ENSCPOG00000015001	-	99	98.097	ENSMLUG00000000592	STAU2	100	97.451	Myotis_lucifugus
ENSCPOG00000015001	-	100	97.495	ENSNGAG00000017873	Stau2	100	97.456	Nannospalax_galili
ENSCPOG00000015001	-	100	70.644	ENSNBRG00000023829	stau2	87	66.610	Neolamprologus_brichardi
ENSCPOG00000015001	-	100	97.495	ENSNLEG00000001342	STAU2	100	95.965	Nomascus_leucogenys
ENSCPOG00000015001	-	96	76.980	ENSNLEG00000036286	-	99	89.655	Nomascus_leucogenys
ENSCPOG00000015001	-	76	58.398	ENSMEUG00000011345	-	68	58.398	Notamacropus_eugenii
ENSCPOG00000015001	-	100	87.084	ENSOPRG00000008474	STAU2	100	86.140	Ochotona_princeps
ENSCPOG00000015001	-	100	99.217	ENSODEG00000003610	STAU2	100	99.217	Octodon_degus
ENSCPOG00000015001	-	100	70.833	ENSONIG00000014300	stau2	88	70.621	Oreochromis_niloticus
ENSCPOG00000015001	-	100	98.239	ENSOCUG00000013843	STAU2	100	91.283	Oryctolagus_cuniculus
ENSCPOG00000015001	-	100	69.905	ENSORLG00000007943	stau2	83	66.093	Oryzias_latipes
ENSCPOG00000015001	-	100	70.095	ENSORLG00020016648	stau2	87	66.265	Oryzias_latipes_hni
ENSCPOG00000015001	-	100	70.095	ENSORLG00015016882	stau2	100	70.255	Oryzias_latipes_hsok
ENSCPOG00000015001	-	100	70.265	ENSOMEG00000010542	stau2	88	67.257	Oryzias_melastigma
ENSCPOG00000015001	-	99	98.391	ENSOGAG00000001112	STAU2	100	98.391	Otolemur_garnettii
ENSCPOG00000015001	-	100	98.043	ENSOARG00000006011	STAU2	97	89.803	Ovis_aries
ENSCPOG00000015001	-	79	74.211	ENSPPAG00000041507	-	100	74.737	Pan_paniscus
ENSCPOG00000015001	-	100	98.330	ENSPPAG00000034287	STAU2	100	97.456	Pan_paniscus
ENSCPOG00000015001	-	100	98.956	ENSPPRG00000024814	STAU2	100	96.316	Panthera_pardus
ENSCPOG00000015001	-	100	98.956	ENSPTIG00000007856	STAU2	100	98.239	Panthera_tigris_altaica
ENSCPOG00000015001	-	100	97.912	ENSPTRG00000047797	STAU2	100	97.065	Pan_troglodytes
ENSCPOG00000015001	-	60	82.230	ENSPTRG00000043384	-	99	82.927	Pan_troglodytes
ENSCPOG00000015001	-	100	65.553	ENSPTRG00000045302	-	100	65.553	Pan_troglodytes
ENSCPOG00000015001	-	100	98.330	ENSPANG00000021222	STAU2	100	96.491	Papio_anubis
ENSCPOG00000015001	-	99	69.474	ENSPKIG00000006663	stau2	98	67.978	Paramormyrops_kingsleyae
ENSCPOG00000015001	-	100	86.497	ENSPSIG00000003686	STAU2	88	86.497	Pelodiscus_sinensis
ENSCPOG00000015001	-	100	70.038	ENSPMGG00000009011	stau2	84	69.450	Periophthalmus_magnuspinnatus
ENSCPOG00000015001	-	100	97.286	ENSPEMG00000012104	Stau2	100	97.286	Peromyscus_maniculatus_bairdii
ENSCPOG00000015001	-	100	60.618	ENSPMAG00000003826	stau2	93	56.207	Petromyzon_marinus
ENSCPOG00000015001	-	100	81.996	ENSPCIG00000012872	STAU2	89	80.351	Phascolarctos_cinereus
ENSCPOG00000015001	-	100	68.727	ENSPFOG00000013147	stau2	88	64.865	Poecilia_formosa
ENSCPOG00000015001	-	54	67.986	ENSPLAG00000009029	stau2	71	68.345	Poecilia_latipinna
ENSCPOG00000015001	-	61	66.323	ENSPLAG00000008809	stau2	85	66.327	Poecilia_latipinna
ENSCPOG00000015001	-	100	69.786	ENSPMEG00000014168	stau2	88	64.865	Poecilia_mexicana
ENSCPOG00000015001	-	100	69.043	ENSPREG00000017795	stau2	87	65.365	Poecilia_reticulata
ENSCPOG00000015001	-	100	90.607	ENSPPYG00000018674	STAU2	100	84.704	Pongo_abelii
ENSCPOG00000015001	-	99	87.647	ENSPCAG00000004679	STAU2	100	87.647	Procavia_capensis
ENSCPOG00000015001	-	100	78.146	ENSPCOG00000011840	STAU2	100	78.146	Propithecus_coquereli
ENSCPOG00000015001	-	100	85.323	ENSPVAG00000014575	STAU2	100	84.211	Pteropus_vampyrus
ENSCPOG00000015001	-	100	70.644	ENSPNYG00000001132	stau2	100	67.973	Pundamilia_nyererei
ENSCPOG00000015001	-	100	75.391	ENSPNAG00000023606	stau2	100	74.211	Pygocentrus_nattereri
ENSCPOG00000015001	-	97	94.720	ENSRNOG00000042458	AABR07046707.1	99	93.478	Rattus_norvegicus
ENSCPOG00000015001	-	100	98.121	ENSRBIG00000034859	-	99	96.687	Rhinopithecus_bieti
ENSCPOG00000015001	-	78	95.868	ENSRROG00000039882	-	94	95.868	Rhinopithecus_roxellana
ENSCPOG00000015001	-	79	68.074	ENSRROG00000029227	-	100	68.602	Rhinopithecus_roxellana
ENSCPOG00000015001	-	100	98.330	ENSSBOG00000032091	STAU2	100	97.652	Saimiri_boliviensis_boliviensis
ENSCPOG00000015001	-	58	77.899	ENSSHAG00000012057	-	90	78.182	Sarcophilus_harrisii
ENSCPOG00000015001	-	100	69.981	ENSSFOG00015012905	stau2	100	68.881	Scleropages_formosus
ENSCPOG00000015001	-	100	70.755	ENSSMAG00000016487	stau2	83	70.943	Scophthalmus_maximus
ENSCPOG00000015001	-	100	71.321	ENSSDUG00000012535	stau2	100	66.497	Seriola_dumerili
ENSCPOG00000015001	-	100	71.321	ENSSLDG00000007156	stau2	100	67.347	Seriola_lalandi_dorsalis
ENSCPOG00000015001	-	79	79.144	ENSSARG00000009750	-	70	79.144	Sorex_araneus
ENSCPOG00000015001	-	89	86.557	ENSSPUG00000018208	STAU2	89	83.644	Sphenodon_punctatus
ENSCPOG00000015001	-	100	70.833	ENSSPAG00000000291	stau2	89	68.132	Stegastes_partitus
ENSCPOG00000015001	-	100	98.747	ENSSSCG00000006179	-	100	98.820	Sus_scrofa
ENSCPOG00000015001	-	100	86.497	ENSTGUG00000011535	STAU2	100	84.561	Taeniopygia_guttata
ENSCPOG00000015001	-	100	69.565	ENSTRUG00000001905	stau2	100	65.254	Takifugu_rubripes
ENSCPOG00000015001	-	99	63.116	ENSTNIG00000008181	stau2	98	61.471	Tetraodon_nigroviridis
ENSCPOG00000015001	-	100	96.673	ENSTBEG00000016245	STAU2	100	95.965	Tupaia_belangeri
ENSCPOG00000015001	-	100	87.084	ENSTTRG00000009236	STAU2	100	86.316	Tursiops_truncatus
ENSCPOG00000015001	-	100	98.239	ENSUMAG00000018908	STAU2	99	98.121	Ursus_maritimus
ENSCPOG00000015001	-	100	97.456	ENSVPAG00000001523	STAU2	100	95.614	Vicugna_pacos
ENSCPOG00000015001	-	100	98.239	ENSVVUG00000019217	-	98	99.154	Vulpes_vulpes
ENSCPOG00000015001	-	100	73.973	ENSXETG00000011826	stau2	100	65.756	Xenopus_tropicalis
ENSCPOG00000015001	-	72	78.947	ENSXCOG00000007032	stau2	82	78.947	Xiphophorus_couchianus
ENSCPOG00000015001	-	100	71.735	ENSXMAG00000010426	stau2	98	71.345	Xiphophorus_maculatus