EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000015139 (Gene tree)
Gene ID: 100727378
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 18061 bases
Position: chrDS562908.1:10673798-10691858
Accession: 100727378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000013648	Btz	PF09405.10	1.2e-23	1	1
ENSCPOP00000028591	Btz	PF09405.10	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000015286	CASC3-202	3399	XM_003466936	ENSCPOP00000013648	698 (aa)	XP_003466984	H0VSN3
ENSCPOT00000041898	CASC3-201	4391	-	ENSCPOP00000028591	698 (aa)	-	H0VSN3

Gene Model

Click here to download ENSCPOG00000015139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015139	CASC3	100	88.336	ENSG00000108349	CASC3	100	88.478	Homo_sapiens
ENSCPOG00000015139	CASC3	75	53.386	ENSAPOG00000008467	casc3	76	50.000	Acanthochromis_polyacanthus
ENSCPOG00000015139	CASC3	100	89.616	ENSAMEG00000007764	CASC3	100	89.758	Ailuropoda_melanoleuca
ENSCPOG00000015139	CASC3	83	53.846	ENSAOCG00000016676	casc3	76	52.318	Amphiprion_ocellaris
ENSCPOG00000015139	CASC3	83	53.846	ENSAPEG00000006787	casc3	76	52.318	Amphiprion_percula
ENSCPOG00000015139	CASC3	75	55.144	ENSATEG00000017196	casc3	56	65.359	Anabas_testudineus
ENSCPOG00000015139	CASC3	91	69.278	ENSACAG00000002674	CASC3	99	64.039	Anolis_carolinensis
ENSCPOG00000015139	CASC3	65	96.667	ENSANAG00000031954	-	100	96.667	Aotus_nancymaae
ENSCPOG00000015139	CASC3	99	78.810	ENSANAG00000034820	-	99	83.186	Aotus_nancymaae
ENSCPOG00000015139	CASC3	83	55.975	ENSACLG00000016198	casc3	80	53.618	Astatotilapia_calliptera
ENSCPOG00000015139	CASC3	73	58.730	ENSAMXG00000032452	casc3	75	55.096	Astyanax_mexicanus
ENSCPOG00000015139	CASC3	100	88.051	ENSBTAG00000006250	CASC3	100	88.336	Bos_taurus
ENSCPOG00000015139	CASC3	100	85.917	ENSCJAG00000016032	CASC3	100	86.771	Callithrix_jacchus
ENSCPOG00000015139	CASC3	100	88.905	ENSCAFG00000016141	CASC3	100	89.047	Canis_familiaris
ENSCPOG00000015139	CASC3	100	88.068	ENSCAFG00020018882	CASC3	100	88.779	Canis_lupus_dingo
ENSCPOG00000015139	CASC3	100	87.055	ENSCHIG00000006338	CASC3	100	87.198	Capra_hircus
ENSCPOG00000015139	CASC3	90	90.256	ENSTSYG00000002975	CASC3	89	90.209	Carlito_syrichta
ENSCPOG00000015139	CASC3	88	99.513	ENSCAPG00000010514	CASC3	100	99.513	Cavia_aperea
ENSCPOG00000015139	CASC3	100	86.932	ENSCCAG00000033620	CASC3	100	87.926	Cebus_capucinus
ENSCPOG00000015139	CASC3	100	88.920	ENSCATG00000033593	CASC3	100	89.062	Cercocebus_atys
ENSCPOG00000015139	CASC3	100	92.877	ENSCLAG00000013730	CASC3	100	93.162	Chinchilla_lanigera
ENSCPOG00000015139	CASC3	100	89.062	ENSCSAG00000002777	CASC3	100	89.205	Chlorocebus_sabaeus
ENSCPOG00000015139	CASC3	99	72.931	ENSCPBG00000004750	CASC3	98	73.488	Chrysemys_picta_bellii
ENSCPOG00000015139	CASC3	100	88.778	ENSCANG00000008814	CASC3	100	88.920	Colobus_angolensis_palliatus
ENSCPOG00000015139	CASC3	100	87.892	ENSCGRG00001014706	Casc3	100	87.037	Cricetulus_griseus_chok1gshd
ENSCPOG00000015139	CASC3	100	82.808	ENSCGRG00000001952	Casc3	100	82.092	Cricetulus_griseus_crigri
ENSCPOG00000015139	CASC3	78	50.467	ENSCSEG00000010047	casc3	52	71.852	Cynoglossus_semilaevis
ENSCPOG00000015139	CASC3	100	88.762	ENSDNOG00000017249	CASC3	96	88.905	Dasypus_novemcinctus
ENSCPOG00000015139	CASC3	100	82.739	ENSETEG00000013720	CASC3	100	83.024	Echinops_telfairi
ENSCPOG00000015139	CASC3	99	37.849	ENSEBUG00000010654	casc3	98	36.400	Eptatretus_burgeri
ENSCPOG00000015139	CASC3	100	88.227	ENSEASG00005002909	CASC3	100	89.053	Equus_asinus_asinus
ENSCPOG00000015139	CASC3	100	89.331	ENSECAG00000019947	CASC3	88	89.474	Equus_caballus
ENSCPOG00000015139	CASC3	73	83.789	ENSEEUG00000014253	CASC3	100	83.594	Erinaceus_europaeus
ENSCPOG00000015139	CASC3	100	89.331	ENSFCAG00000014998	CASC3	100	89.474	Felis_catus
ENSCPOG00000015139	CASC3	89	72.699	ENSFALG00000000412	CASC3	98	72.441	Ficedula_albicollis
ENSCPOG00000015139	CASC3	94	89.346	ENSFDAG00000020696	CASC3	100	88.889	Fukomys_damarensis
ENSCPOG00000015139	CASC3	82	53.846	ENSFHEG00000015793	casc3	77	53.247	Fundulus_heteroclitus
ENSCPOG00000015139	CASC3	91	75.156	ENSGALG00000031813	CASC3	99	69.528	Gallus_gallus
ENSCPOG00000015139	CASC3	83	51.266	ENSGAFG00000017148	casc3	67	49.511	Gambusia_affinis
ENSCPOG00000015139	CASC3	89	74.881	ENSGAGG00000008432	CASC3	91	83.486	Gopherus_agassizii
ENSCPOG00000015139	CASC3	100	88.193	ENSGGOG00000005067	CASC3	100	88.336	Gorilla_gorilla
ENSCPOG00000015139	CASC3	83	55.975	ENSHBUG00000013155	casc3	80	53.618	Haplochromis_burtoni
ENSCPOG00000015139	CASC3	100	91.038	ENSHGLG00000012117	CASC3	100	91.323	Heterocephalus_glaber_female
ENSCPOG00000015139	CASC3	90	91.693	ENSHGLG00100002268	CASC3	99	91.653	Heterocephalus_glaber_male
ENSCPOG00000015139	CASC3	100	89.331	ENSSTOG00000006374	CASC3	100	89.474	Ictidomys_tridecemlineatus
ENSCPOG00000015139	CASC3	100	86.648	ENSJJAG00000023525	Casc3	100	86.932	Jaculus_jaculus
ENSCPOG00000015139	CASC3	64	63.025	ENSKMAG00000019507	casc3	81	49.391	Kryptolebias_marmoratus
ENSCPOG00000015139	CASC3	88	57.845	ENSLACG00000013200	CASC3	99	54.696	Latimeria_chalumnae
ENSCPOG00000015139	CASC3	73	71.981	ENSLOCG00000013518	casc3	71	69.082	Lepisosteus_oculatus
ENSCPOG00000015139	CASC3	100	87.909	ENSLAFG00000000606	CASC3	100	88.051	Loxodonta_africana
ENSCPOG00000015139	CASC3	100	88.920	ENSMFAG00000041496	CASC3	100	90.397	Macaca_fascicularis
ENSCPOG00000015139	CASC3	100	88.920	ENSMMUG00000045187	CASC3	100	89.062	Macaca_mulatta
ENSCPOG00000015139	CASC3	90	89.793	ENSMLEG00000029049	CASC3	98	89.744	Mandrillus_leucophaeus
ENSCPOG00000015139	CASC3	76	53.937	ENSMAMG00000005235	casc3	69	55.118	Mastacembelus_armatus
ENSCPOG00000015139	CASC3	83	55.975	ENSMZEG00005003815	casc3	80	53.618	Maylandia_zebra
ENSCPOG00000015139	CASC3	87	74.183	ENSMGAG00000013247	CASC3	99	72.033	Meleagris_gallopavo
ENSCPOG00000015139	CASC3	72	86.800	ENSMAUG00000006023	Casc3	95	86.800	Mesocricetus_auratus
ENSCPOG00000015139	CASC3	100	87.642	ENSMICG00000003321	CASC3	100	87.926	Microcebus_murinus
ENSCPOG00000015139	CASC3	100	87.322	ENSMOCG00000013644	Casc3	100	85.613	Microtus_ochrogaster
ENSCPOG00000015139	CASC3	50	50.402	ENSMMOG00000014339	casc3	80	47.488	Mola_mola
ENSCPOG00000015139	CASC3	100	76.857	ENSMODG00000013044	CASC3	92	76.857	Monodelphis_domestica
ENSCPOG00000015139	CASC3	100	86.325	MGP_CAROLIEiJ_G0017099	Casc3	100	84.900	Mus_caroli
ENSCPOG00000015139	CASC3	100	85.897	ENSMUSG00000078676	Casc3	100	84.473	Mus_musculus
ENSCPOG00000015139	CASC3	100	86.040	MGP_SPRETEiJ_G0017943	Casc3	100	84.615	Mus_spretus
ENSCPOG00000015139	CASC3	100	89.047	ENSMPUG00000014903	CASC3	100	89.189	Mustela_putorius_furo
ENSCPOG00000015139	CASC3	100	85.957	ENSMLUG00000010520	CASC3	100	85.957	Myotis_lucifugus
ENSCPOG00000015139	CASC3	100	86.325	ENSNGAG00000023121	Casc3	100	85.470	Nannospalax_galili
ENSCPOG00000015139	CASC3	100	87.198	ENSNLEG00000001598	CASC3	100	87.340	Nomascus_leucogenys
ENSCPOG00000015139	CASC3	73	83.529	ENSOPRG00000007240	-	79	95.833	Ochotona_princeps
ENSCPOG00000015139	CASC3	100	91.218	ENSODEG00000017858	CASC3	100	91.501	Octodon_degus
ENSCPOG00000015139	CASC3	84	54.573	ENSONIG00000009337	casc3	91	51.318	Oreochromis_niloticus
ENSCPOG00000015139	CASC3	80	53.578	ENSOANG00000003499	-	86	66.007	Ornithorhynchus_anatinus
ENSCPOG00000015139	CASC3	100	88.193	ENSOCUG00000002954	CASC3	100	88.051	Oryctolagus_cuniculus
ENSCPOG00000015139	CASC3	100	88.244	ENSOGAG00000034486	CASC3	98	88.984	Otolemur_garnettii
ENSCPOG00000015139	CASC3	100	88.193	ENSOARG00000013239	CASC3	100	88.336	Ovis_aries
ENSCPOG00000015139	CASC3	100	88.336	ENSPPAG00000035069	CASC3	100	88.478	Pan_paniscus
ENSCPOG00000015139	CASC3	100	89.331	ENSPPRG00000023670	CASC3	100	89.474	Panthera_pardus
ENSCPOG00000015139	CASC3	91	89.953	ENSPTIG00000010891	CASC3	91	89.953	Panthera_tigris_altaica
ENSCPOG00000015139	CASC3	100	88.636	ENSPANG00000021708	CASC3	100	88.778	Papio_anubis
ENSCPOG00000015139	CASC3	99	47.959	ENSPKIG00000023186	casc3	98	43.869	Paramormyrops_kingsleyae
ENSCPOG00000015139	CASC3	100	87.179	ENSPEMG00000009774	Casc3	100	86.182	Peromyscus_maniculatus_bairdii
ENSCPOG00000015139	CASC3	100	80.571	ENSPCIG00000025678	CASC3	100	80.286	Phascolarctos_cinereus
ENSCPOG00000015139	CASC3	90	49.767	ENSPFOG00000017632	casc3	100	47.043	Poecilia_formosa
ENSCPOG00000015139	CASC3	90	50.562	ENSPLAG00000005268	casc3	77	54.545	Poecilia_latipinna
ENSCPOG00000015139	CASC3	69	46.830	ENSPMEG00000010299	casc3	79	46.680	Poecilia_mexicana
ENSCPOG00000015139	CASC3	70	67.857	ENSPREG00000011856	casc3	82	50.088	Poecilia_reticulata
ENSCPOG00000015139	CASC3	100	86.629	ENSPPYG00000008467	CASC3	100	88.051	Pongo_abelii
ENSCPOG00000015139	CASC3	100	86.771	ENSPCOG00000008183	CASC3	100	88.051	Propithecus_coquereli
ENSCPOG00000015139	CASC3	100	88.051	ENSPVAG00000008556	CASC3	100	88.193	Pteropus_vampyrus
ENSCPOG00000015139	CASC3	83	55.975	ENSPNYG00000011962	casc3	80	53.618	Pundamilia_nyererei
ENSCPOG00000015139	CASC3	91	88.496	ENSRNOG00000009716	Casc3	100	87.611	Rattus_norvegicus
ENSCPOG00000015139	CASC3	100	89.062	ENSRBIG00000033289	CASC3	100	88.068	Rhinopithecus_bieti
ENSCPOG00000015139	CASC3	100	89.062	ENSRROG00000022337	CASC3	100	89.205	Rhinopithecus_roxellana
ENSCPOG00000015139	CASC3	88	87.217	ENSSBOG00000031406	CASC3	98	88.997	Saimiri_boliviensis_boliviensis
ENSCPOG00000015139	CASC3	90	80.414	ENSSHAG00000013338	CASC3	99	80.000	Sarcophilus_harrisii
ENSCPOG00000015139	CASC3	54	48.214	ENSSMAG00000016096	casc3	56	62.805	Scophthalmus_maximus
ENSCPOG00000015139	CASC3	62	76.724	ENSSLDG00000020308	casc3	64	79.630	Seriola_lalandi_dorsalis
ENSCPOG00000015139	CASC3	85	77.609	ENSSARG00000010378	CASC3	98	77.609	Sorex_araneus
ENSCPOG00000015139	CASC3	79	53.441	ENSSPAG00000023008	casc3	77	52.159	Stegastes_partitus
ENSCPOG00000015139	CASC3	90	88.179	ENSSSCG00000017477	CASC3	98	88.122	Sus_scrofa
ENSCPOG00000015139	CASC3	75	72.296	ENSTGUG00000002300	CASC3	99	72.571	Taeniopygia_guttata
ENSCPOG00000015139	CASC3	66	96.226	ENSTBEG00000017459	CASC3	67	96.226	Tupaia_belangeri
ENSCPOG00000015139	CASC3	87	79.305	ENSTTRG00000016896	CASC3	98	79.125	Tursiops_truncatus
ENSCPOG00000015139	CASC3	100	88.210	ENSUAMG00000015116	CASC3	100	89.086	Ursus_americanus
ENSCPOG00000015139	CASC3	90	89.137	ENSUMAG00000017697	CASC3	100	90.722	Ursus_maritimus
ENSCPOG00000015139	CASC3	75	96.639	ENSVPAG00000000799	CASC3	75	96.639	Vicugna_pacos
ENSCPOG00000015139	CASC3	100	88.905	ENSVVUG00000000997	CASC3	100	89.047	Vulpes_vulpes
ENSCPOG00000015139	CASC3	90	59.119	ENSXETG00000024395	casc3	98	57.123	Xenopus_tropicalis
ENSCPOG00000015139	CASC3	85	53.517	ENSXMAG00000013937	casc3	77	52.922	Xiphophorus_maculatus