EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000015437 (Gene tree)
Gene ID: 100719957
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 40242 bases
Position: chrDS562903.1:338007-378248
Accession: 100719957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021697	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000041905	RAB1A-203	381	-	ENSCPOP00000024696	126 (aa)	-	A0A286XH64
ENSCPOT00000038975	RAB1A-201	2953	XM_003467515	ENSCPOP00000021697	205 (aa)	XP_003467563	A0A286X8E8
ENSCPOT00000015588	RAB1A-202	417	-	ENSCPOP00000013918	138 (aa)	-	H0VTD0

Gene Model

Click here to download ENSCPOG00000015437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000015437	RAB1A	80	47.619	ENSCPOG00000000119	RAB33A	71	47.619
ENSCPOG00000015437	RAB1A	81	50.602	ENSCPOG00000005047	RAB30	82	50.602
ENSCPOG00000015437	RAB1A	95	43.367	ENSCPOG00000034818	RAB5B	90	43.367
ENSCPOG00000015437	RAB1A	82	32.544	ENSCPOG00000031743	RHEB	91	32.544
ENSCPOG00000015437	RAB1A	100	46.047	ENSCPOG00000030154	RAB11B	99	46.047
ENSCPOG00000015437	RAB1A	57	30.252	ENSCPOG00000000543	ARL4A	59	30.252
ENSCPOG00000015437	RAB1A	83	43.429	ENSCPOG00000030742	RAB33B	76	43.429
ENSCPOG00000015437	RAB1A	97	47.000	ENSCPOG00000026575	RAB2B	99	45.274
ENSCPOG00000015437	RAB1A	76	38.994	ENSCPOG00000030676	RAB9A	79	38.994
ENSCPOG00000015437	RAB1A	57	31.933	ENSCPOG00000010678	ARL14	59	31.933
ENSCPOG00000015437	RAB1A	82	50.296	ENSCPOG00000022689	RAB12	90	46.561
ENSCPOG00000015437	RAB1A	78	39.264	ENSCPOG00000034570	RAB7A	79	39.264
ENSCPOG00000015437	RAB1A	83	44.444	ENSCPOG00000025645	RAB37	79	44.444
ENSCPOG00000015437	RAB1A	99	44.554	ENSCPOG00000036631	RAB14	93	44.554
ENSCPOG00000015437	RAB1A	81	46.988	ENSCPOG00000002472	RAB25	78	46.988
ENSCPOG00000015437	RAB1A	84	35.593	ENSCPOG00000000101	HRAS	93	35.593
ENSCPOG00000015437	RAB1A	57	32.231	ENSCPOG00000025520	-	61	32.231
ENSCPOG00000015437	RAB1A	99	51.485	ENSCPOG00000011491	-	99	51.485
ENSCPOG00000015437	RAB1A	77	33.333	ENSCPOG00000039323	RAB24	79	34.568
ENSCPOG00000015437	RAB1A	86	43.820	ENSCPOG00000039524	RAB39B	84	43.820
ENSCPOG00000015437	RAB1A	95	37.629	ENSCPOG00000008172	RAB22A	97	37.629
ENSCPOG00000015437	RAB1A	81	34.940	ENSCPOG00000030218	RAB23	70	34.940
ENSCPOG00000015437	RAB1A	80	37.805	ENSCPOG00000030290	KRAS	95	35.912
ENSCPOG00000015437	RAB1A	80	35.928	ENSCPOG00000034906	MRAS	80	35.928
ENSCPOG00000015437	RAB1A	85	52.299	ENSCPOG00000037599	RAB11A	81	52.299
ENSCPOG00000015437	RAB1A	77	39.752	ENSCPOG00000001449	RAB34	62	39.752
ENSCPOG00000015437	RAB1A	80	38.415	ENSCPOG00000021833	Nras	86	38.415
ENSCPOG00000015437	RAB1A	94	45.361	ENSCPOG00000032827	RAB18	93	45.361
ENSCPOG00000015437	RAB1A	57	31.356	ENSCPOG00000031098	ARL8B	61	31.356
ENSCPOG00000015437	RAB1A	93	32.500	ENSCPOG00000026899	-	87	32.500
ENSCPOG00000015437	RAB1A	92	32.990	ENSCPOG00000000528	RERG	91	32.990
ENSCPOG00000015437	RAB1A	94	36.410	ENSCPOG00000038813	RAB6B	94	36.410
ENSCPOG00000015437	RAB1A	99	93.069	ENSCPOG00000014868	RAB1B	100	93.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015437	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSCPOG00000015437	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSCPOG00000015437	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSCPOG00000015437	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSCPOG00000015437	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSCPOG00000015437	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSCPOG00000015437	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSCPOG00000015437	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSCPOG00000015437	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSCPOG00000015437	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSCPOG00000015437	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSCPOG00000015437	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSCPOG00000015437	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSCPOG00000015437	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSCPOG00000015437	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSCPOG00000015437	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSCPOG00000015437	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSCPOG00000015437	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSCPOG00000015437	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSCPOG00000015437	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSCPOG00000015437	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSCPOG00000015437	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSCPOG00000015437	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSCPOG00000015437	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSCPOG00000015437	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSCPOG00000015437	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSCPOG00000015437	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSCPOG00000015437	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSCPOG00000015437	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSCPOG00000015437	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSCPOG00000015437	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSCPOG00000015437	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSCPOG00000015437	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSCPOG00000015437	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSCPOG00000015437	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSCPOG00000015437	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSCPOG00000015437	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSCPOG00000015437	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSCPOG00000015437	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSCPOG00000015437	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000015437	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSCPOG00000015437	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSCPOG00000015437	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSCPOG00000015437	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSCPOG00000015437	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSCPOG00000015437	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSCPOG00000015437	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSCPOG00000015437	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSCPOG00000015437	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000015437	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSCPOG00000015437	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSCPOG00000015437	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSCPOG00000015437	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSCPOG00000015437	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSCPOG00000015437	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSCPOG00000015437	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSCPOG00000015437	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSCPOG00000015437	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSCPOG00000015437	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSCPOG00000015437	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSCPOG00000015437	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSCPOG00000015437	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSCPOG00000015437	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSCPOG00000015437	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSCPOG00000015437	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSCPOG00000015437	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSCPOG00000015437	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSCPOG00000015437	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSCPOG00000015437	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSCPOG00000015437	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSCPOG00000015437	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSCPOG00000015437	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSCPOG00000015437	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSCPOG00000015437	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSCPOG00000015437	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSCPOG00000015437	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSCPOG00000015437	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSCPOG00000015437	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSCPOG00000015437	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSCPOG00000015437	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSCPOG00000015437	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSCPOG00000015437	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSCPOG00000015437	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSCPOG00000015437	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSCPOG00000015437	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSCPOG00000015437	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSCPOG00000015437	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSCPOG00000015437	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSCPOG00000015437	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSCPOG00000015437	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSCPOG00000015437	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSCPOG00000015437	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSCPOG00000015437	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSCPOG00000015437	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSCPOG00000015437	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSCPOG00000015437	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSCPOG00000015437	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSCPOG00000015437	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSCPOG00000015437	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSCPOG00000015437	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus