EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000015594 (Gene tree)
Gene ID: 100736123
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 29801 bases
Position: chrDS562880.1:11128593-11158393
Accession: 100736123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021990	PWI	PF01480.17	4.3e-21	1	1
ENSCPOP00000014062	PWI	PF01480.17	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000015746	SRRM1-201	2721	XM_013153995	ENSCPOP00000014062	906 (aa)	XP_013009449	H0VTQ5
ENSCPOT00000047805	SRRM1-202	2679	-	ENSCPOP00000021990	892 (aa)	-	A0A286X990

Gene Model

Click here to download ENSCPOG00000015594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015594	SRRM1	100	95.575	ENSG00000133226	SRRM1	99	100.000	Homo_sapiens
ENSCPOG00000015594	SRRM1	100	94.989	ENSAMEG00000010075	SRRM1	100	94.989	Ailuropoda_melanoleuca
ENSCPOG00000015594	SRRM1	60	64.646	ENSAPLG00000002066	SRRM1	59	75.623	Anas_platyrhynchos
ENSCPOG00000015594	SRRM1	100	95.207	ENSANAG00000035606	SRRM1	100	95.207	Aotus_nancymaae
ENSCPOG00000015594	SRRM1	100	95.671	ENSBTAG00000013772	SRRM1	100	95.671	Bos_taurus
ENSCPOG00000015594	SRRM1	100	95.354	ENSCAFG00020020948	SRRM1	100	95.354	Canis_lupus_dingo
ENSCPOG00000015594	SRRM1	100	94.414	ENSCHIG00000014656	SRRM1	100	94.414	Capra_hircus
ENSCPOG00000015594	SRRM1	100	95.465	ENSTSYG00000006782	SRRM1	100	95.465	Carlito_syrichta
ENSCPOG00000015594	SRRM1	99	98.331	ENSCAPG00000011473	SRRM1	100	98.331	Cavia_aperea
ENSCPOG00000015594	SRRM1	100	95.133	ENSCCAG00000029474	SRRM1	100	95.133	Cebus_capucinus
ENSCPOG00000015594	SRRM1	59	94.620	ENSCATG00000031303	SRRM1	59	94.620	Cercocebus_atys
ENSCPOG00000015594	SRRM1	100	96.612	ENSCLAG00000014592	SRRM1	100	96.612	Chinchilla_lanigera
ENSCPOG00000015594	SRRM1	53	91.713	ENSCHOG00000000027	SRRM1	50	91.713	Choloepus_hoffmanni
ENSCPOG00000015594	SRRM1	100	94.984	ENSEASG00005004270	SRRM1	100	94.984	Equus_asinus_asinus
ENSCPOG00000015594	SRRM1	100	95.127	ENSECAG00000026981	SRRM1	100	95.127	Equus_caballus
ENSCPOG00000015594	SRRM1	100	95.575	ENSFCAG00000000678	-	100	95.575	Felis_catus
ENSCPOG00000015594	SRRM1	100	96.612	ENSFDAG00000009903	SRRM1	100	96.612	Fukomys_damarensis
ENSCPOG00000015594	SRRM1	100	95.465	ENSGGOG00000005209	SRRM1	100	95.465	Gorilla_gorilla
ENSCPOG00000015594	SRRM1	100	96.612	ENSHGLG00000017105	SRRM1	100	96.612	Heterocephalus_glaber_female
ENSCPOG00000015594	SRRM1	99	96.098	ENSHGLG00100016772	SRRM1	99	96.098	Heterocephalus_glaber_male
ENSCPOG00000015594	SRRM1	100	96.078	ENSSTOG00000014640	SRRM1	100	96.078	Ictidomys_tridecemlineatus
ENSCPOG00000015594	SRRM1	100	92.561	ENSLAFG00000013830	SRRM1	100	92.561	Loxodonta_africana
ENSCPOG00000015594	SRRM1	60	76.493	ENSMFAG00000038841	-	61	77.016	Macaca_fascicularis
ENSCPOG00000015594	SRRM1	55	77.419	ENSMMUG00000039269	-	59	76.815	Macaca_mulatta
ENSCPOG00000015594	SRRM1	59	94.805	ENSMNEG00000039415	SRRM1	100	95.465	Macaca_nemestrina
ENSCPOG00000015594	SRRM1	60	67.664	ENSMLEG00000032221	-	61	70.095	Mandrillus_leucophaeus
ENSCPOG00000015594	SRRM1	73	94.595	ENSMLEG00000038030	-	92	95.409	Mandrillus_leucophaeus
ENSCPOG00000015594	SRRM1	100	95.534	ENSMICG00000006553	SRRM1	100	95.534	Microcebus_murinus
ENSCPOG00000015594	SRRM1	59	88.290	ENSMLUG00000006246	SRRM1	59	89.591	Myotis_lucifugus
ENSCPOG00000015594	SRRM1	100	95.575	ENSNLEG00000008966	SRRM1	100	95.575	Nomascus_leucogenys
ENSCPOG00000015594	SRRM1	75	81.445	ENSMEUG00000014704	SRRM1	61	87.302	Notamacropus_eugenii
ENSCPOG00000015594	SRRM1	100	95.316	ENSOGAG00000010210	SRRM1	100	95.316	Otolemur_garnettii
ENSCPOG00000015594	SRRM1	92	95.976	ENSOARG00000006453	SRRM1	99	95.976	Ovis_aries
ENSCPOG00000015594	SRRM1	100	95.465	ENSPPAG00000043918	SRRM1	100	95.465	Pan_paniscus
ENSCPOG00000015594	SRRM1	100	95.575	ENSPPRG00000002509	SRRM1	100	95.575	Panthera_pardus
ENSCPOG00000015594	SRRM1	100	95.643	ENSPTRG00000000349	SRRM1	100	95.643	Pan_troglodytes
ENSCPOG00000015594	SRRM1	55	76.364	ENSPANG00000035568	-	59	75.354	Papio_anubis
ENSCPOG00000015594	SRRM1	53	94.227	ENSPANG00000010194	SRRM1	56	94.227	Papio_anubis
ENSCPOG00000015594	SRRM1	100	94.989	ENSPPYG00000001716	SRRM1	100	94.989	Pongo_abelii
ENSCPOG00000015594	SRRM1	100	93.573	ENSPVAG00000005836	SRRM1	100	93.573	Pteropus_vampyrus
ENSCPOG00000015594	SRRM1	89	95.946	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCPOG00000015594	SRRM1	58	91.475	ENSSARG00000013718	SRRM1	58	90.164	Sorex_araneus
ENSCPOG00000015594	SRRM1	99	95.060	ENSSSCG00000032947	SRRM1	100	94.881	Sus_scrofa
ENSCPOG00000015594	SRRM1	100	95.197	ENSTBEG00000000100	SRRM1	100	95.197	Tupaia_belangeri
ENSCPOG00000015594	SRRM1	100	88.669	ENSVVUG00000026966	SRRM1	100	88.669	Vulpes_vulpes