EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000015595 (Gene tree)
Gene ID: 100725172
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 68217 bases
Position: chrDS562953.1:4478965-4547181
Accession: 100725172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000014063	FDF	PF09532.10	2.7e-16	1	1
ENSCPOP00000014063	LSM14	PF12701.7	5.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000015747	EDC3-201	3357	XM_003463582	ENSCPOP00000014063	508 (aa)	XP_003463630	H0VTQ6

Gene Model

Click here to download ENSCPOG00000015595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015595	EDC3	100	95.276	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSCPOG00000015595	EDC3	100	56.117	ENSAPOG00000008655	EDC3	100	56.117	Acanthochromis_polyacanthus
ENSCPOG00000015595	EDC3	100	70.196	ENSAPOG00000010791	edc3	100	70.196	Acanthochromis_polyacanthus
ENSCPOG00000015595	EDC3	100	95.276	ENSAMEG00000008963	EDC3	100	95.276	Ailuropoda_melanoleuca
ENSCPOG00000015595	EDC3	100	68.959	ENSACIG00000017751	edc3	100	68.959	Amphilophus_citrinellus
ENSCPOG00000015595	EDC3	99	59.884	ENSACIG00000005330	EDC3	99	59.884	Amphilophus_citrinellus
ENSCPOG00000015595	EDC3	100	58.641	ENSAOCG00000009103	-	100	58.641	Amphiprion_ocellaris
ENSCPOG00000015595	EDC3	100	70.196	ENSAOCG00000005431	edc3	100	70.196	Amphiprion_ocellaris
ENSCPOG00000015595	EDC3	100	70.196	ENSAPEG00000000968	edc3	100	70.196	Amphiprion_percula
ENSCPOG00000015595	EDC3	100	58.447	ENSAPEG00000007841	EDC3	100	58.447	Amphiprion_percula
ENSCPOG00000015595	EDC3	100	70.000	ENSATEG00000015505	edc3	100	70.000	Anabas_testudineus
ENSCPOG00000015595	EDC3	100	58.252	ENSATEG00000004205	-	100	58.252	Anabas_testudineus
ENSCPOG00000015595	EDC3	90	86.154	ENSAPLG00000008957	EDC3	100	86.154	Anas_platyrhynchos
ENSCPOG00000015595	EDC3	78	85.894	ENSACAG00000000460	-	100	85.894	Anolis_carolinensis
ENSCPOG00000015595	EDC3	100	95.472	ENSANAG00000024078	EDC3	100	95.472	Aotus_nancymaae
ENSCPOG00000015595	EDC3	100	67.780	ENSACLG00000007232	edc3	100	67.780	Astatotilapia_calliptera
ENSCPOG00000015595	EDC3	99	58.285	ENSACLG00000018776	-	99	58.285	Astatotilapia_calliptera
ENSCPOG00000015595	EDC3	100	70.565	ENSAMXG00000001589	edc3	100	70.565	Astyanax_mexicanus
ENSCPOG00000015595	EDC3	100	94.882	ENSBTAG00000007308	EDC3	100	94.882	Bos_taurus
ENSCPOG00000015595	EDC3	100	95.669	ENSCJAG00000017681	EDC3	100	95.669	Callithrix_jacchus
ENSCPOG00000015595	EDC3	100	94.882	ENSCAFG00000017935	EDC3	100	94.882	Canis_familiaris
ENSCPOG00000015595	EDC3	100	94.882	ENSCAFG00020003909	EDC3	100	94.882	Canis_lupus_dingo
ENSCPOG00000015595	EDC3	100	95.276	ENSCHIG00000023658	EDC3	100	95.276	Capra_hircus
ENSCPOG00000015595	EDC3	100	95.866	ENSTSYG00000004822	EDC3	100	95.866	Carlito_syrichta
ENSCPOG00000015595	EDC3	100	95.866	ENSCCAG00000021663	EDC3	100	95.866	Cebus_capucinus
ENSCPOG00000015595	EDC3	100	96.063	ENSCATG00000037511	EDC3	100	96.063	Cercocebus_atys
ENSCPOG00000015595	EDC3	100	98.425	ENSCLAG00000005700	EDC3	100	98.425	Chinchilla_lanigera
ENSCPOG00000015595	EDC3	100	96.063	ENSCSAG00000014239	EDC3	100	96.063	Chlorocebus_sabaeus
ENSCPOG00000015595	EDC3	100	88.189	ENSCPBG00000024239	EDC3	100	88.189	Chrysemys_picta_bellii
ENSCPOG00000015595	EDC3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSCPOG00000015595	EDC3	100	96.063	ENSCANG00000028699	EDC3	100	96.063	Colobus_angolensis_palliatus
ENSCPOG00000015595	EDC3	100	95.472	ENSCGRG00001013874	Edc3	100	95.472	Cricetulus_griseus_chok1gshd
ENSCPOG00000015595	EDC3	100	95.472	ENSCGRG00000011885	Edc3	100	95.472	Cricetulus_griseus_crigri
ENSCPOG00000015595	EDC3	99	69.882	ENSCSEG00000012996	edc3	99	69.882	Cynoglossus_semilaevis
ENSCPOG00000015595	EDC3	100	68.762	ENSCVAG00000008023	edc3	100	68.762	Cyprinodon_variegatus
ENSCPOG00000015595	EDC3	99	69.216	ENSDARG00000051931	edc3	99	69.216	Danio_rerio
ENSCPOG00000015595	EDC3	100	83.721	ENSDNOG00000030661	EDC3	100	83.721	Dasypus_novemcinctus
ENSCPOG00000015595	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSCPOG00000015595	EDC3	100	95.669	ENSEASG00005005071	EDC3	100	95.669	Equus_asinus_asinus
ENSCPOG00000015595	EDC3	100	95.669	ENSECAG00000017994	EDC3	100	95.669	Equus_caballus
ENSCPOG00000015595	EDC3	100	65.887	ENSELUG00000005794	edc3	100	65.887	Esox_lucius
ENSCPOG00000015595	EDC3	100	62.231	ENSELUG00000007607	EDC3	100	62.231	Esox_lucius
ENSCPOG00000015595	EDC3	100	95.472	ENSFCAG00000002014	EDC3	100	95.472	Felis_catus
ENSCPOG00000015595	EDC3	98	84.569	ENSFALG00000004543	EDC3	96	84.569	Ficedula_albicollis
ENSCPOG00000015595	EDC3	100	96.850	ENSFDAG00000012582	EDC3	100	96.850	Fukomys_damarensis
ENSCPOG00000015595	EDC3	100	69.804	ENSFHEG00000009375	edc3	100	69.804	Fundulus_heteroclitus
ENSCPOG00000015595	EDC3	100	68.421	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSCPOG00000015595	EDC3	100	87.795	ENSGALG00000040181	EDC3	100	87.795	Gallus_gallus
ENSCPOG00000015595	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.039	Gambusia_affinis
ENSCPOG00000015595	EDC3	100	68.959	ENSGACG00000009783	edc3	100	68.959	Gasterosteus_aculeatus
ENSCPOG00000015595	EDC3	99	56.673	ENSGACG00000014671	EDC3	99	57.588	Gasterosteus_aculeatus
ENSCPOG00000015595	EDC3	100	87.795	ENSGAGG00000023477	EDC3	100	87.795	Gopherus_agassizii
ENSCPOG00000015595	EDC3	100	95.472	ENSGGOG00000003552	EDC3	100	95.472	Gorilla_gorilla
ENSCPOG00000015595	EDC3	99	58.285	ENSHBUG00000020817	EDC3	99	58.285	Haplochromis_burtoni
ENSCPOG00000015595	EDC3	100	67.780	ENSHBUG00000003635	edc3	100	67.780	Haplochromis_burtoni
ENSCPOG00000015595	EDC3	100	68.555	ENSHCOG00000016834	edc3	100	68.689	Hippocampus_comes
ENSCPOG00000015595	EDC3	99	70.530	ENSIPUG00000005695	edc3	100	70.530	Ictalurus_punctatus
ENSCPOG00000015595	EDC3	100	95.472	ENSSTOG00000013936	EDC3	100	95.472	Ictidomys_tridecemlineatus
ENSCPOG00000015595	EDC3	100	94.488	ENSJJAG00000008074	Edc3	100	94.488	Jaculus_jaculus
ENSCPOG00000015595	EDC3	100	69.548	ENSKMAG00000001243	edc3	100	69.548	Kryptolebias_marmoratus
ENSCPOG00000015595	EDC3	100	56.102	ENSKMAG00000001987	EDC3	100	56.102	Kryptolebias_marmoratus
ENSCPOG00000015595	EDC3	100	59.029	ENSLBEG00000017984	EDC3	100	59.029	Labrus_bergylta
ENSCPOG00000015595	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSCPOG00000015595	EDC3	100	76.893	ENSLACG00000014149	EDC3	100	76.893	Latimeria_chalumnae
ENSCPOG00000015595	EDC3	99	67.383	ENSLOCG00000014625	edc3	99	67.773	Lepisosteus_oculatus
ENSCPOG00000015595	EDC3	100	93.898	ENSLAFG00000002992	EDC3	100	93.898	Loxodonta_africana
ENSCPOG00000015595	EDC3	100	95.669	ENSMFAG00000043074	EDC3	100	95.669	Macaca_fascicularis
ENSCPOG00000015595	EDC3	100	95.669	ENSMMUG00000011071	EDC3	100	95.669	Macaca_mulatta
ENSCPOG00000015595	EDC3	100	95.669	ENSMNEG00000035316	EDC3	100	95.669	Macaca_nemestrina
ENSCPOG00000015595	EDC3	100	96.063	ENSMLEG00000030372	EDC3	100	96.063	Mandrillus_leucophaeus
ENSCPOG00000015595	EDC3	100	70.334	ENSMAMG00000000505	edc3	100	70.334	Mastacembelus_armatus
ENSCPOG00000015595	EDC3	99	57.227	ENSMAMG00000005423	-	99	57.227	Mastacembelus_armatus
ENSCPOG00000015595	EDC3	100	67.780	ENSMZEG00005004892	edc3	100	67.780	Maylandia_zebra
ENSCPOG00000015595	EDC3	99	58.984	ENSMZEG00005005654	EDC3	99	58.984	Maylandia_zebra
ENSCPOG00000015595	EDC3	100	86.811	ENSMGAG00000002617	EDC3	100	86.811	Meleagris_gallopavo
ENSCPOG00000015595	EDC3	100	94.685	ENSMICG00000043190	EDC3	100	94.685	Microcebus_murinus
ENSCPOG00000015595	EDC3	100	95.669	ENSMOCG00000016205	Edc3	100	95.669	Microtus_ochrogaster
ENSCPOG00000015595	EDC3	99	69.548	ENSMMOG00000012278	edc3	99	69.548	Mola_mola
ENSCPOG00000015595	EDC3	100	91.535	ENSMODG00000009442	EDC3	100	91.535	Monodelphis_domestica
ENSCPOG00000015595	EDC3	100	70.138	ENSMALG00000008658	edc3	100	70.138	Monopterus_albus
ENSCPOG00000015595	EDC3	100	94.488	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSCPOG00000015595	EDC3	100	94.291	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSCPOG00000015595	EDC3	100	94.685	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSCPOG00000015595	EDC3	100	94.094	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSCPOG00000015595	EDC3	100	94.882	ENSMPUG00000017293	EDC3	100	94.882	Mustela_putorius_furo
ENSCPOG00000015595	EDC3	100	95.294	ENSMLUG00000016382	EDC3	100	95.294	Myotis_lucifugus
ENSCPOG00000015595	EDC3	100	94.685	ENSNGAG00000010923	Edc3	100	94.685	Nannospalax_galili
ENSCPOG00000015595	EDC3	99	58.984	ENSNBRG00000007881	EDC3	99	58.984	Neolamprologus_brichardi
ENSCPOG00000015595	EDC3	100	68.369	ENSNBRG00000002434	edc3	100	68.369	Neolamprologus_brichardi
ENSCPOG00000015595	EDC3	100	86.024	ENSNLEG00000014577	EDC3	100	86.024	Nomascus_leucogenys
ENSCPOG00000015595	EDC3	100	90.945	ENSMEUG00000009077	EDC3	100	90.945	Notamacropus_eugenii
ENSCPOG00000015595	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSCPOG00000015595	EDC3	100	60.700	ENSONIG00000002932	-	100	60.700	Oreochromis_niloticus
ENSCPOG00000015595	EDC3	100	67.976	ENSONIG00000008434	edc3	100	67.976	Oreochromis_niloticus
ENSCPOG00000015595	EDC3	78	90.680	ENSOCUG00000017740	EDC3	86	90.680	Oryctolagus_cuniculus
ENSCPOG00000015595	EDC3	100	67.780	ENSORLG00000004883	edc3	100	67.780	Oryzias_latipes
ENSCPOG00000015595	EDC3	100	56.836	ENSORLG00000014399	-	98	56.836	Oryzias_latipes
ENSCPOG00000015595	EDC3	100	56.836	ENSORLG00020019446	-	100	56.836	Oryzias_latipes_hni
ENSCPOG00000015595	EDC3	100	67.780	ENSORLG00020012262	edc3	100	67.780	Oryzias_latipes_hni
ENSCPOG00000015595	EDC3	100	56.445	ENSORLG00015017635	-	96	56.445	Oryzias_latipes_hsok
ENSCPOG00000015595	EDC3	100	67.969	ENSORLG00015005634	edc3	100	67.969	Oryzias_latipes_hsok
ENSCPOG00000015595	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSCPOG00000015595	EDC3	100	69.336	ENSOMEG00000014026	edc3	100	69.336	Oryzias_melastigma
ENSCPOG00000015595	EDC3	100	95.079	ENSOGAG00000014441	EDC3	100	95.079	Otolemur_garnettii
ENSCPOG00000015595	EDC3	100	94.499	ENSOARG00000003476	EDC3	100	94.892	Ovis_aries
ENSCPOG00000015595	EDC3	100	95.472	ENSPPAG00000040143	EDC3	100	95.472	Pan_paniscus
ENSCPOG00000015595	EDC3	100	95.866	ENSPPRG00000006257	EDC3	100	95.866	Panthera_pardus
ENSCPOG00000015595	EDC3	100	95.866	ENSPTIG00000017424	EDC3	100	95.866	Panthera_tigris_altaica
ENSCPOG00000015595	EDC3	100	95.472	ENSPTRG00000007279	EDC3	100	95.472	Pan_troglodytes
ENSCPOG00000015595	EDC3	100	96.063	ENSPANG00000015997	EDC3	100	96.063	Papio_anubis
ENSCPOG00000015595	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSCPOG00000015595	EDC3	100	69.336	ENSPKIG00000004416	edc3	100	70.117	Paramormyrops_kingsleyae
ENSCPOG00000015595	EDC3	100	82.480	ENSPSIG00000008474	EDC3	100	82.480	Pelodiscus_sinensis
ENSCPOG00000015595	EDC3	100	67.515	ENSPMGG00000007223	edc3	100	67.515	Periophthalmus_magnuspinnatus
ENSCPOG00000015595	EDC3	100	95.276	ENSPEMG00000015260	Edc3	100	95.276	Peromyscus_maniculatus_bairdii
ENSCPOG00000015595	EDC3	100	90.354	ENSPCIG00000006276	EDC3	70	90.533	Phascolarctos_cinereus
ENSCPOG00000015595	EDC3	100	68.872	ENSPFOG00000012204	edc3	100	68.872	Poecilia_formosa
ENSCPOG00000015595	EDC3	100	68.872	ENSPLAG00000014420	edc3	100	68.872	Poecilia_latipinna
ENSCPOG00000015595	EDC3	100	68.872	ENSPMEG00000023289	edc3	100	68.872	Poecilia_mexicana
ENSCPOG00000015595	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSCPOG00000015595	EDC3	100	94.291	ENSPPYG00000006642	EDC3	100	94.291	Pongo_abelii
ENSCPOG00000015595	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSCPOG00000015595	EDC3	100	95.866	ENSPCOG00000013364	EDC3	100	95.866	Propithecus_coquereli
ENSCPOG00000015595	EDC3	100	94.685	ENSPVAG00000014733	EDC3	100	94.685	Pteropus_vampyrus
ENSCPOG00000015595	EDC3	99	58.285	ENSPNYG00000009669	EDC3	99	58.285	Pundamilia_nyererei
ENSCPOG00000015595	EDC3	100	67.780	ENSPNYG00000021797	edc3	100	67.780	Pundamilia_nyererei
ENSCPOG00000015595	EDC3	100	70.588	ENSPNAG00000019657	edc3	100	70.588	Pygocentrus_nattereri
ENSCPOG00000015595	EDC3	99	94.851	ENSRNOG00000019579	Edc3	99	94.851	Rattus_norvegicus
ENSCPOG00000015595	EDC3	100	95.669	ENSRBIG00000019488	EDC3	100	95.669	Rhinopithecus_bieti
ENSCPOG00000015595	EDC3	100	95.669	ENSRROG00000034959	EDC3	100	95.669	Rhinopithecus_roxellana
ENSCPOG00000015595	EDC3	100	96.063	ENSSBOG00000004896	EDC3	100	96.063	Saimiri_boliviensis_boliviensis
ENSCPOG00000015595	EDC3	96	90.798	ENSSHAG00000015075	EDC3	95	90.798	Sarcophilus_harrisii
ENSCPOG00000015595	EDC3	100	70.817	ENSSFOG00015016939	edc3	100	72.179	Scleropages_formosus
ENSCPOG00000015595	EDC3	100	63.922	ENSSFOG00015002439	edc3	100	65.370	Scleropages_formosus
ENSCPOG00000015595	EDC3	99	57.505	ENSSMAG00000010176	-	99	57.700	Scophthalmus_maximus
ENSCPOG00000015595	EDC3	100	69.412	ENSSMAG00000010695	edc3	100	69.745	Scophthalmus_maximus
ENSCPOG00000015595	EDC3	100	69.804	ENSSDUG00000021844	edc3	100	69.804	Seriola_dumerili
ENSCPOG00000015595	EDC3	100	59.339	ENSSDUG00000007671	EDC3	100	59.339	Seriola_dumerili
ENSCPOG00000015595	EDC3	100	69.804	ENSSLDG00000022046	edc3	100	69.804	Seriola_lalandi_dorsalis
ENSCPOG00000015595	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSCPOG00000015595	EDC3	100	87.205	ENSSPUG00000008232	EDC3	100	87.205	Sphenodon_punctatus
ENSCPOG00000015595	EDC3	100	70.000	ENSSPAG00000010009	edc3	100	70.196	Stegastes_partitus
ENSCPOG00000015595	EDC3	100	58.171	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSCPOG00000015595	EDC3	100	95.079	ENSSSCG00000001903	EDC3	100	95.079	Sus_scrofa
ENSCPOG00000015595	EDC3	100	87.402	ENSTGUG00000004007	EDC3	100	87.402	Taeniopygia_guttata
ENSCPOG00000015595	EDC3	100	70.334	ENSTRUG00000017078	edc3	100	70.334	Takifugu_rubripes
ENSCPOG00000015595	EDC3	100	69.080	ENSTNIG00000016047	edc3	100	69.080	Tetraodon_nigroviridis
ENSCPOG00000015595	EDC3	100	95.079	ENSTTRG00000007990	EDC3	100	95.079	Tursiops_truncatus
ENSCPOG00000015595	EDC3	100	95.276	ENSUAMG00000026710	-	100	95.276	Ursus_americanus
ENSCPOG00000015595	EDC3	100	95.276	ENSUMAG00000005006	EDC3	96	95.276	Ursus_maritimus
ENSCPOG00000015595	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSCPOG00000015595	EDC3	100	94.882	ENSVVUG00000018601	EDC3	100	94.882	Vulpes_vulpes
ENSCPOG00000015595	EDC3	68	81.609	ENSXETG00000010622	edc3	99	82.471	Xenopus_tropicalis
ENSCPOG00000015595	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus