EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000015641 (Gene tree)
Gene ID: 100734056
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 154365 bases
Position: chrDS562900.1:7816430-7970794
Accession: 100734056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023713	ResIII	PF04851.15	6.6e-08	1	1
ENSCPOP00000014107	ResIII	PF04851.15	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000046501	CHD6-202	10560	XM_013150333	ENSCPOP00000023713	2676 (aa)	XP_013005787	A0A286XEB5
ENSCPOT00000046294	CHD6-203	645	-	ENSCPOP00000023612	214 (aa)	-	A0A286XDS9
ENSCPOT00000015796	CHD6-201	10680	XM_003467660	ENSCPOP00000014107	2716 (aa)	XP_003467708	H0VTU5

Gene Model

Click here to download ENSCPOG00000015641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000015641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000015641	CHD6	75	60.675	ENSCPOG00000036544	CHD9	74	58.231
ENSCPOG00000015641	CHD6	60	62.091	ENSCPOG00000002538	CHD8	60	62.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000015641	CHD6	100	91.584	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSCPOG00000015641	CHD6	74	75.363	ENSAPOG00000013736	chd6	64	75.446	Acanthochromis_polyacanthus
ENSCPOG00000015641	CHD6	100	90.291	ENSAMEG00000009496	CHD6	100	90.291	Ailuropoda_melanoleuca
ENSCPOG00000015641	CHD6	74	75.464	ENSATEG00000005608	chd6	64	75.597	Anabas_testudineus
ENSCPOG00000015641	CHD6	69	78.575	ENSAPLG00000015592	CHD6	100	72.234	Anas_platyrhynchos
ENSCPOG00000015641	CHD6	99	66.933	ENSACAG00000006842	CHD6	99	67.478	Anolis_carolinensis
ENSCPOG00000015641	CHD6	100	91.106	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSCPOG00000015641	CHD6	79	71.248	ENSAMXG00000009576	chd6	78	69.660	Astyanax_mexicanus
ENSCPOG00000015641	CHD6	100	87.546	ENSBTAG00000005733	CHD6	100	87.546	Bos_taurus
ENSCPOG00000015641	CHD6	100	91.069	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSCPOG00000015641	CHD6	100	90.401	ENSCAFG00000009236	CHD6	100	90.401	Canis_familiaris
ENSCPOG00000015641	CHD6	99	89.919	ENSCAFG00020012906	CHD6	99	96.886	Canis_lupus_dingo
ENSCPOG00000015641	CHD6	100	87.325	ENSCHIG00000017606	CHD6	100	87.325	Capra_hircus
ENSCPOG00000015641	CHD6	84	90.666	ENSTSYG00000014635	CHD6	100	90.666	Carlito_syrichta
ENSCPOG00000015641	CHD6	100	91.327	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSCPOG00000015641	CHD6	100	91.143	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSCPOG00000015641	CHD6	100	95.338	ENSCLAG00000013743	CHD6	100	95.301	Chinchilla_lanigera
ENSCPOG00000015641	CHD6	100	91.290	ENSCSAG00000013997	CHD6	100	91.290	Chlorocebus_sabaeus
ENSCPOG00000015641	CHD6	91	89.130	ENSCHOG00000012647	CHD6	95	89.130	Choloepus_hoffmanni
ENSCPOG00000015641	CHD6	99	73.249	ENSCPBG00000019382	CHD6	99	73.638	Chrysemys_picta_bellii
ENSCPOG00000015641	CHD6	100	91.290	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSCPOG00000015641	CHD6	100	89.849	ENSCGRG00001002694	Chd6	100	89.812	Cricetulus_griseus_chok1gshd
ENSCPOG00000015641	CHD6	82	73.393	ENSDARG00000017244	chd6	79	72.983	Danio_rerio
ENSCPOG00000015641	CHD6	99	89.229	ENSDNOG00000004176	CHD6	99	89.229	Dasypus_novemcinctus
ENSCPOG00000015641	CHD6	99	90.214	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSCPOG00000015641	CHD6	99	90.983	ENSECAG00000011761	CHD6	100	90.983	Equus_caballus
ENSCPOG00000015641	CHD6	65	79.374	ENSELUG00000012309	chd6	89	79.374	Esox_lucius
ENSCPOG00000015641	CHD6	100	90.482	ENSFCAG00000003572	CHD6	100	90.482	Felis_catus
ENSCPOG00000015641	CHD6	99	71.440	ENSFALG00000012563	CHD6	98	71.341	Ficedula_albicollis
ENSCPOG00000015641	CHD6	99	95.054	ENSFDAG00000013791	CHD6	99	95.054	Fukomys_damarensis
ENSCPOG00000015641	CHD6	73	69.049	ENSGMOG00000011715	chd6	84	69.192	Gadus_morhua
ENSCPOG00000015641	CHD6	79	69.148	ENSGACG00000000037	chd6	86	69.007	Gasterosteus_aculeatus
ENSCPOG00000015641	CHD6	100	91.510	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSCPOG00000015641	CHD6	78	71.975	ENSHBUG00000014701	chd6	64	74.074	Haplochromis_burtoni
ENSCPOG00000015641	CHD6	100	95.222	ENSHGLG00000004548	CHD6	100	95.222	Heterocephalus_glaber_female
ENSCPOG00000015641	CHD6	100	95.182	ENSHGLG00100006401	CHD6	100	95.182	Heterocephalus_glaber_male
ENSCPOG00000015641	CHD6	80	74.069	ENSIPUG00000003692	chd6	74	76.946	Ictalurus_punctatus
ENSCPOG00000015641	CHD6	100	92.571	ENSSTOG00000013382	CHD6	100	92.571	Ictidomys_tridecemlineatus
ENSCPOG00000015641	CHD6	85	76.999	ENSLACG00000010881	CHD6	84	76.981	Latimeria_chalumnae
ENSCPOG00000015641	CHD6	73	80.177	ENSLOCG00000007386	chd6	84	75.650	Lepisosteus_oculatus
ENSCPOG00000015641	CHD6	100	90.368	ENSLAFG00000012144	CHD6	100	90.368	Loxodonta_africana
ENSCPOG00000015641	CHD6	100	91.363	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSCPOG00000015641	CHD6	100	91.363	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSCPOG00000015641	CHD6	100	91.363	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSCPOG00000015641	CHD6	99	91.292	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSCPOG00000015641	CHD6	77	71.508	ENSMAMG00000013111	chd6	64	74.478	Mastacembelus_armatus
ENSCPOG00000015641	CHD6	99	71.946	ENSMGAG00000001121	CHD6	100	72.385	Meleagris_gallopavo
ENSCPOG00000015641	CHD6	99	91.617	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSCPOG00000015641	CHD6	89	79.695	ENSMODG00000000720	-	99	79.736	Monodelphis_domestica
ENSCPOG00000015641	CHD6	100	88.378	MGP_CAROLIEiJ_G0024604	Chd6	100	94.346	Mus_caroli
ENSCPOG00000015641	CHD6	100	88.599	ENSMUSG00000057133	Chd6	100	94.262	Mus_musculus
ENSCPOG00000015641	CHD6	100	88.599	MGP_PahariEiJ_G0026048	Chd6	100	94.684	Mus_pahari
ENSCPOG00000015641	CHD6	100	88.525	MGP_SPRETEiJ_G0025526	Chd6	100	94.346	Mus_spretus
ENSCPOG00000015641	CHD6	100	89.068	ENSMPUG00000017695	CHD6	100	89.032	Mustela_putorius_furo
ENSCPOG00000015641	CHD6	100	90.143	ENSMLUG00000016247	CHD6	100	90.143	Myotis_lucifugus
ENSCPOG00000015641	CHD6	78	73.017	ENSNBRG00000013839	chd6	79	72.775	Neolamprologus_brichardi
ENSCPOG00000015641	CHD6	100	89.680	ENSNLEG00000006496	CHD6	99	90.074	Nomascus_leucogenys
ENSCPOG00000015641	CHD6	100	86.755	ENSOPRG00000013376	-	100	86.755	Ochotona_princeps
ENSCPOG00000015641	CHD6	81	74.936	ENSONIG00000000393	chd6	81	74.646	Oreochromis_niloticus
ENSCPOG00000015641	CHD6	99	70.270	ENSOANG00000014347	CHD6	99	70.569	Ornithorhynchus_anatinus
ENSCPOG00000015641	CHD6	99	88.922	ENSOCUG00000012394	CHD6	100	88.922	Oryctolagus_cuniculus
ENSCPOG00000015641	CHD6	79	70.691	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSCPOG00000015641	CHD6	99	90.270	ENSOGAG00000002427	CHD6	100	90.070	Otolemur_garnettii
ENSCPOG00000015641	CHD6	99	85.147	ENSOARG00000002597	CHD6	100	85.147	Ovis_aries
ENSCPOG00000015641	CHD6	100	90.511	ENSPPRG00000014756	CHD6	100	90.511	Panthera_pardus
ENSCPOG00000015641	CHD6	100	90.401	ENSPTIG00000011094	CHD6	100	90.401	Panthera_tigris_altaica
ENSCPOG00000015641	CHD6	100	91.657	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSCPOG00000015641	CHD6	100	91.327	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSCPOG00000015641	CHD6	77	76.197	ENSPKIG00000005578	chd6	78	73.178	Paramormyrops_kingsleyae
ENSCPOG00000015641	CHD6	76	76.065	ENSPMGG00000014877	chd6	89	75.069	Periophthalmus_magnuspinnatus
ENSCPOG00000015641	CHD6	100	79.055	ENSPCIG00000028037	CHD6	100	79.523	Phascolarctos_cinereus
ENSCPOG00000015641	CHD6	77	71.206	ENSPLAG00000003128	chd6	68	72.791	Poecilia_latipinna
ENSCPOG00000015641	CHD6	75	71.108	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSCPOG00000015641	CHD6	100	91.624	ENSPPYG00000011016	CHD6	100	91.624	Pongo_abelii
ENSCPOG00000015641	CHD6	99	91.605	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSCPOG00000015641	CHD6	78	74.417	ENSPNYG00000022516	chd6	78	73.997	Pundamilia_nyererei
ENSCPOG00000015641	CHD6	81	70.989	ENSPNAG00000012825	chd6	79	71.187	Pygocentrus_nattereri
ENSCPOG00000015641	CHD6	100	88.047	ENSRNOG00000016744	Chd6	100	87.826	Rattus_norvegicus
ENSCPOG00000015641	CHD6	100	91.327	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSCPOG00000015641	CHD6	100	78.527	ENSSHAG00000017072	CHD6	100	78.967	Sarcophilus_harrisii
ENSCPOG00000015641	CHD6	78	76.252	ENSSFOG00015012920	chd6	81	73.026	Scleropages_formosus
ENSCPOG00000015641	CHD6	59	98.684	ENSSARG00000002615	-	61	98.684	Sorex_araneus
ENSCPOG00000015641	CHD6	100	89.154	ENSSSCG00000007360	CHD6	100	89.154	Sus_scrofa
ENSCPOG00000015641	CHD6	96	73.528	ENSTGUG00000003179	CHD6	99	73.642	Taeniopygia_guttata
ENSCPOG00000015641	CHD6	75	77.192	ENSTNIG00000017487	chd6	86	75.537	Tetraodon_nigroviridis
ENSCPOG00000015641	CHD6	100	87.105	ENSTTRG00000013438	CHD6	100	87.105	Tursiops_truncatus
ENSCPOG00000015641	CHD6	99	89.143	ENSUAMG00000024036	CHD6	95	96.139	Ursus_americanus
ENSCPOG00000015641	CHD6	99	90.543	ENSUMAG00000002017	CHD6	95	96.139	Ursus_maritimus
ENSCPOG00000015641	CHD6	92	89.904	ENSVPAG00000007941	CHD6	93	89.904	Vicugna_pacos
ENSCPOG00000015641	CHD6	100	90.291	ENSVVUG00000029164	CHD6	100	90.291	Vulpes_vulpes
ENSCPOG00000015641	CHD6	91	71.395	ENSXETG00000021445	chd6	91	71.065	Xenopus_tropicalis