EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000019272 (Gene tree)
Gene ID: 100725600
Gene Symbol: -
Alias: -
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 2938 bases
Position: chrDS562864.1:6628294-6631231
Accession: 100725600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000018941	DND1_DSRM	PF14709.7	1.6e-25	1	1
ENSCPOP00000018941	RRM_1	PF00076.22	2.9e-32	1	3
ENSCPOP00000018941	RRM_1	PF00076.22	2.9e-32	2	3
ENSCPOP00000018941	RRM_1	PF00076.22	2.9e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000025066	-	1841	XM_005006348	ENSCPOP00000018941	536 (aa)	XP_005006405	H0W7I7

Gene Model

Click here to download ENSCPOG00000019272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000019272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000019272	-	55	54.000	ENSCPOG00000012415	SYNCRIP	53	53.333
ENSCPOG00000019272	-	100	95.539	ENSCPOG00000010284	-	100	95.539
ENSCPOG00000019272	-	56	71.667	ENSCPOG00000014100	RBM47	57	71.667
ENSCPOG00000019272	-	50	31.429	ENSCPOG00000008327	TIA1	71	31.429
ENSCPOG00000019272	-	86	51.149	ENSCPOG00000009807	A1CF	88	51.149
ENSCPOG00000019272	-	96	84.170	ENSCPOG00000020396	-	99	84.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000019272	-	100	90.706	ENSG00000151962	RBM46	100	95.489	Homo_sapiens
ENSCPOG00000019272	-	87	61.031	ENSAPOG00000009209	rbm46	93	61.111	Acanthochromis_polyacanthus
ENSCPOG00000019272	-	100	91.078	ENSAMEG00000013290	RBM46	100	91.078	Ailuropoda_melanoleuca
ENSCPOG00000019272	-	90	56.098	ENSACIG00000014500	rbm46	94	56.187	Amphilophus_citrinellus
ENSCPOG00000019272	-	86	59.875	ENSAOCG00000001892	-	99	58.022	Amphiprion_ocellaris
ENSCPOG00000019272	-	82	63.514	ENSAPEG00000017762	rbm46	96	63.514	Amphiprion_percula
ENSCPOG00000019272	-	98	57.598	ENSATEG00000010775	rbm46	98	57.765	Anabas_testudineus
ENSCPOG00000019272	-	87	84.368	ENSAPLG00000005116	RBM46	100	84.368	Anas_platyrhynchos
ENSCPOG00000019272	-	100	85.130	ENSACAG00000015599	RBM46	100	85.130	Anolis_carolinensis
ENSCPOG00000019272	-	100	89.591	ENSANAG00000029193	RBM46	99	91.435	Aotus_nancymaae
ENSCPOG00000019272	-	90	59.438	ENSACLG00000016153	rbm46	94	58.165	Astatotilapia_calliptera
ENSCPOG00000019272	-	96	58.427	ENSAMXG00000020892	-	99	58.427	Astyanax_mexicanus
ENSCPOG00000019272	-	84	63.636	ENSAMXG00000009397	rbm46	98	63.576	Astyanax_mexicanus
ENSCPOG00000019272	-	100	89.963	ENSBTAG00000001696	RBM46	100	89.963	Bos_taurus
ENSCPOG00000019272	-	100	88.662	ENSCJAG00000001768	RBM46	99	91.649	Callithrix_jacchus
ENSCPOG00000019272	-	100	91.636	ENSCAFG00000008473	RBM46	100	91.636	Canis_familiaris
ENSCPOG00000019272	-	100	91.636	ENSCAFG00020002468	RBM46	100	91.636	Canis_lupus_dingo
ENSCPOG00000019272	-	100	90.520	ENSCHIG00000000502	RBM46	100	90.520	Capra_hircus
ENSCPOG00000019272	-	88	91.314	ENSTSYG00000010435	RBM46	99	91.435	Carlito_syrichta
ENSCPOG00000019272	-	88	95.763	ENSCAPG00000011928	-	97	95.763	Cavia_aperea
ENSCPOG00000019272	-	69	88.649	ENSCAPG00000011841	-	99	88.889	Cavia_aperea
ENSCPOG00000019272	-	100	74.907	ENSCCAG00000001323	-	99	76.695	Cebus_capucinus
ENSCPOG00000019272	-	100	90.706	ENSCCAG00000027619	-	99	92.291	Cebus_capucinus
ENSCPOG00000019272	-	88	91.737	ENSCATG00000040148	RBM46	99	91.649	Cercocebus_atys
ENSCPOG00000019272	-	97	87.380	ENSCLAG00000011886	-	99	87.380	Chinchilla_lanigera
ENSCPOG00000019272	-	100	92.565	ENSCLAG00000005846	-	99	94.004	Chinchilla_lanigera
ENSCPOG00000019272	-	100	91.078	ENSCSAG00000003263	RBM46	100	91.078	Chlorocebus_sabaeus
ENSCPOG00000019272	-	100	89.963	ENSCHOG00000003429	RBM46	100	89.963	Choloepus_hoffmanni
ENSCPOG00000019272	-	83	90.112	ENSCPBG00000009314	RBM46	97	90.112	Chrysemys_picta_bellii
ENSCPOG00000019272	-	88	91.314	ENSCANG00000039065	RBM46	99	91.435	Colobus_angolensis_palliatus
ENSCPOG00000019272	-	100	91.264	ENSCGRG00001016714	Rbm46	99	92.291	Cricetulus_griseus_chok1gshd
ENSCPOG00000019272	-	100	91.264	ENSCGRG00000011738	Rbm46	99	92.291	Cricetulus_griseus_crigri
ENSCPOG00000019272	-	85	56.466	ENSCSEG00000005530	rbm46	98	56.466	Cynoglossus_semilaevis
ENSCPOG00000019272	-	85	61.388	ENSCVAG00000021013	rbm46	95	61.388	Cyprinodon_variegatus
ENSCPOG00000019272	-	97	61.194	ENSDARG00000079452	rbm46	99	61.698	Danio_rerio
ENSCPOG00000019272	-	100	91.078	ENSDNOG00000016195	RBM46	100	91.078	Dasypus_novemcinctus
ENSCPOG00000019272	-	100	90.892	ENSDORG00000006405	Rbm46	99	92.077	Dipodomys_ordii
ENSCPOG00000019272	-	100	86.989	ENSETEG00000014902	RBM46	100	86.989	Echinops_telfairi
ENSCPOG00000019272	-	100	89.963	ENSEASG00005015821	RBM46	100	89.963	Equus_asinus_asinus
ENSCPOG00000019272	-	88	91.314	ENSECAG00000007649	RBM46	97	91.314	Equus_caballus
ENSCPOG00000019272	-	100	88.104	ENSEEUG00000011824	RBM46	100	88.104	Erinaceus_europaeus
ENSCPOG00000019272	-	71	68.930	ENSELUG00000008166	rbm46	98	68.930	Esox_lucius
ENSCPOG00000019272	-	100	91.264	ENSFCAG00000029812	RBM46	99	92.505	Felis_catus
ENSCPOG00000019272	-	88	82.590	ENSFALG00000013157	RBM46	93	82.590	Ficedula_albicollis
ENSCPOG00000019272	-	96	82.081	ENSFDAG00000006445	-	96	82.081	Fukomys_damarensis
ENSCPOG00000019272	-	100	91.078	ENSFDAG00000019281	-	100	91.078	Fukomys_damarensis
ENSCPOG00000019272	-	73	59.799	ENSFHEG00000013257	rbm46	87	59.799	Fundulus_heteroclitus
ENSCPOG00000019272	-	88	76.110	ENSGALG00000009278	RBM46	99	76.110	Gallus_gallus
ENSCPOG00000019272	-	53	78.596	ENSGAFG00000020245	rbm46	89	78.049	Gambusia_affinis
ENSCPOG00000019272	-	94	85.119	ENSGAGG00000002019	RBM46	95	85.119	Gopherus_agassizii
ENSCPOG00000019272	-	100	90.892	ENSGGOG00000001876	RBM46	99	92.077	Gorilla_gorilla
ENSCPOG00000019272	-	83	59.641	ENSHBUG00000009609	rbm46	91	64.439	Haplochromis_burtoni
ENSCPOG00000019272	-	100	85.130	ENSHGLG00000002463	-	99	92.841	Heterocephalus_glaber_female
ENSCPOG00000019272	-	98	79.317	ENSHGLG00000002940	-	100	79.317	Heterocephalus_glaber_female
ENSCPOG00000019272	-	97	73.106	ENSHGLG00000010742	-	99	72.727	Heterocephalus_glaber_female
ENSCPOG00000019272	-	100	91.078	ENSHGLG00100012752	-	99	92.505	Heterocephalus_glaber_male
ENSCPOG00000019272	-	97	76.336	ENSHGLG00100018987	-	99	76.190	Heterocephalus_glaber_male
ENSCPOG00000019272	-	97	73.106	ENSHGLG00100004977	-	99	72.727	Heterocephalus_glaber_male
ENSCPOG00000019272	-	87	50.533	ENSHCOG00000012998	rbm46	93	50.533	Hippocampus_comes
ENSCPOG00000019272	-	99	60.036	ENSIPUG00000024038	rbm46	98	63.618	Ictalurus_punctatus
ENSCPOG00000019272	-	100	91.450	ENSSTOG00000007918	RBM46	99	92.505	Ictidomys_tridecemlineatus
ENSCPOG00000019272	-	88	91.102	ENSJJAG00000003902	Rbm46	99	91.006	Jaculus_jaculus
ENSCPOG00000019272	-	100	56.387	ENSKMAG00000015127	rbm46	100	56.387	Kryptolebias_marmoratus
ENSCPOG00000019272	-	100	82.931	ENSLACG00000002062	RBM46	100	82.931	Latimeria_chalumnae
ENSCPOG00000019272	-	96	69.112	ENSLOCG00000008298	rbm46	96	73.438	Lepisosteus_oculatus
ENSCPOG00000019272	-	87	92.077	ENSLAFG00000015448	RBM46	99	92.077	Loxodonta_africana
ENSCPOG00000019272	-	88	92.161	ENSMFAG00000043485	RBM46	99	92.077	Macaca_fascicularis
ENSCPOG00000019272	-	88	92.161	ENSMMUG00000021147	RBM46	97	92.161	Macaca_mulatta
ENSCPOG00000019272	-	88	92.161	ENSMNEG00000002787	RBM46	99	92.077	Macaca_nemestrina
ENSCPOG00000019272	-	88	91.525	ENSMLEG00000029756	RBM46	99	91.435	Mandrillus_leucophaeus
ENSCPOG00000019272	-	83	64.459	ENSMAMG00000009093	rbm46	96	60.692	Mastacembelus_armatus
ENSCPOG00000019272	-	90	59.175	ENSMZEG00005027849	rbm46	97	60.206	Maylandia_zebra
ENSCPOG00000019272	-	87	76.759	ENSMGAG00000001457	RBM46	99	76.759	Meleagris_gallopavo
ENSCPOG00000019272	-	100	91.264	ENSMAUG00000009911	Rbm46	99	92.291	Mesocricetus_auratus
ENSCPOG00000019272	-	100	90.706	ENSMICG00000042747	RBM46	100	90.706	Microcebus_murinus
ENSCPOG00000019272	-	100	91.264	ENSMOCG00000001188	Rbm46	99	92.291	Microtus_ochrogaster
ENSCPOG00000019272	-	84	62.174	ENSMMOG00000011214	rbm46	97	56.955	Mola_mola
ENSCPOG00000019272	-	100	83.733	ENSMODG00000001302	RBM46	100	83.733	Monodelphis_domestica
ENSCPOG00000019272	-	76	64.078	ENSMALG00000006185	rbm46	87	64.234	Monopterus_albus
ENSCPOG00000019272	-	100	91.450	MGP_CAROLIEiJ_G0025101	Rbm46	99	92.719	Mus_caroli
ENSCPOG00000019272	-	100	91.264	ENSMUSG00000033882	Rbm46	99	92.291	Mus_musculus
ENSCPOG00000019272	-	100	90.892	MGP_PahariEiJ_G0026544	Rbm46	99	92.291	Mus_pahari
ENSCPOG00000019272	-	100	91.078	MGP_SPRETEiJ_G0026043	Rbm46	100	91.078	Mus_spretus
ENSCPOG00000019272	-	88	92.585	ENSMPUG00000005670	RBM46	97	92.585	Mustela_putorius_furo
ENSCPOG00000019272	-	100	90.353	ENSMLUG00000003221	RBM46	100	90.353	Myotis_lucifugus
ENSCPOG00000019272	-	100	89.591	ENSNGAG00000004231	Rbm46	99	91.649	Nannospalax_galili
ENSCPOG00000019272	-	84	61.674	ENSNBRG00000000273	rbm46	84	62.780	Neolamprologus_brichardi
ENSCPOG00000019272	-	88	91.949	ENSNLEG00000006184	RBM46	99	91.863	Nomascus_leucogenys
ENSCPOG00000019272	-	77	92.067	ENSMEUG00000013328	RBM46	98	91.892	Notamacropus_eugenii
ENSCPOG00000019272	-	52	93.286	ENSOPRG00000007136	RBM46	100	94.346	Ochotona_princeps
ENSCPOG00000019272	-	97	83.493	ENSODEG00000018002	-	96	83.493	Octodon_degus
ENSCPOG00000019272	-	100	91.078	ENSODEG00000000735	-	99	92.719	Octodon_degus
ENSCPOG00000019272	-	83	62.749	ENSONIG00000014096	rbm46	96	62.749	Oreochromis_niloticus
ENSCPOG00000019272	-	93	81.800	ENSOANG00000002141	RBM46	100	81.800	Ornithorhynchus_anatinus
ENSCPOG00000019272	-	100	90.892	ENSOCUG00000017859	RBM46	100	90.892	Oryctolagus_cuniculus
ENSCPOG00000019272	-	86	59.873	ENSORLG00000002429	rbm46	97	56.022	Oryzias_latipes
ENSCPOG00000019272	-	86	60.128	ENSORLG00020022154	rbm46	97	55.576	Oryzias_latipes_hni
ENSCPOG00000019272	-	86	60.430	ENSORLG00015020234	rbm46	94	60.254	Oryzias_latipes_hsok
ENSCPOG00000019272	-	83	60.532	ENSOMEG00000022580	rbm46	99	55.514	Oryzias_melastigma
ENSCPOG00000019272	-	100	91.264	ENSOGAG00000005647	RBM46	100	91.264	Otolemur_garnettii
ENSCPOG00000019272	-	100	90.335	ENSOARG00000016406	RBM46	100	90.335	Ovis_aries
ENSCPOG00000019272	-	88	92.161	ENSPPAG00000043236	RBM46	99	92.077	Pan_paniscus
ENSCPOG00000019272	-	100	90.892	ENSPPRG00000009416	RBM46	99	92.291	Panthera_pardus
ENSCPOG00000019272	-	100	90.892	ENSPTIG00000017449	RBM46	99	92.291	Panthera_tigris_altaica
ENSCPOG00000019272	-	88	92.161	ENSPTRG00000016538	RBM46	99	92.077	Pan_troglodytes
ENSCPOG00000019272	-	100	90.892	ENSPANG00000004186	RBM46	99	92.077	Papio_anubis
ENSCPOG00000019272	-	99	63.687	ENSPKIG00000015334	rbm46	92	63.687	Paramormyrops_kingsleyae
ENSCPOG00000019272	-	88	89.641	ENSPSIG00000006429	RBM46	97	89.641	Pelodiscus_sinensis
ENSCPOG00000019272	-	89	80.150	ENSPMGG00000019872	rbm46	97	80.150	Periophthalmus_magnuspinnatus
ENSCPOG00000019272	-	100	91.264	ENSPEMG00000013899	Rbm46	99	92.291	Peromyscus_maniculatus_bairdii
ENSCPOG00000019272	-	100	90.706	ENSPCIG00000029626	RBM46	100	90.706	Phascolarctos_cinereus
ENSCPOG00000019272	-	74	76.094	ENSPFOG00000001079	rbm46	73	76.094	Poecilia_formosa
ENSCPOG00000019272	-	94	58.994	ENSPLAG00000004541	rbm46	98	57.041	Poecilia_latipinna
ENSCPOG00000019272	-	90	60.404	ENSPMEG00000015724	rbm46	92	62.914	Poecilia_mexicana
ENSCPOG00000019272	-	94	58.994	ENSPREG00000014464	rbm46	96	63.158	Poecilia_reticulata
ENSCPOG00000019272	-	100	90.520	ENSPPYG00000015144	RBM46	100	90.520	Pongo_abelii
ENSCPOG00000019272	-	99	83.054	ENSPCAG00000003110	RBM46	99	83.799	Procavia_capensis
ENSCPOG00000019272	-	100	89.591	ENSPCOG00000024347	RBM46	99	91.221	Propithecus_coquereli
ENSCPOG00000019272	-	100	90.892	ENSPVAG00000008376	RBM46	100	90.892	Pteropus_vampyrus
ENSCPOG00000019272	-	96	62.243	ENSPNAG00000025312	rbm46	99	62.243	Pygocentrus_nattereri
ENSCPOG00000019272	-	100	91.450	ENSRNOG00000025823	Rbm46	100	91.450	Rattus_norvegicus
ENSCPOG00000019272	-	88	91.525	ENSRBIG00000032583	RBM46	99	91.435	Rhinopithecus_bieti
ENSCPOG00000019272	-	88	91.314	ENSRROG00000044288	RBM46	99	91.221	Rhinopithecus_roxellana
ENSCPOG00000019272	-	100	90.335	ENSSBOG00000033028	RBM46	99	92.077	Saimiri_boliviensis_boliviensis
ENSCPOG00000019272	-	100	90.892	ENSSHAG00000012596	RBM46	100	90.892	Sarcophilus_harrisii
ENSCPOG00000019272	-	99	65.038	ENSSFOG00015000087	rbm46	98	64.662	Scleropages_formosus
ENSCPOG00000019272	-	84	60.889	ENSSMAG00000017042	rbm46	93	60.889	Scophthalmus_maximus
ENSCPOG00000019272	-	92	58.541	ENSSDUG00000020645	rbm46	89	63.420	Seriola_dumerili
ENSCPOG00000019272	-	100	91.078	ENSSARG00000006520	RBM46	100	91.078	Sorex_araneus
ENSCPOG00000019272	-	100	88.126	ENSSPUG00000012525	-	100	88.126	Sphenodon_punctatus
ENSCPOG00000019272	-	98	80.718	ENSSPUG00000004773	-	98	87.633	Sphenodon_punctatus
ENSCPOG00000019272	-	85	60.879	ENSSPAG00000013697	rbm46	95	60.879	Stegastes_partitus
ENSCPOG00000019272	-	88	92.797	ENSSSCG00000008994	RBM46	97	92.797	Sus_scrofa
ENSCPOG00000019272	-	87	81.370	ENSTGUG00000005307	RBM46	100	81.370	Taeniopygia_guttata
ENSCPOG00000019272	-	87	60.684	ENSTRUG00000004237	rbm46	94	60.684	Takifugu_rubripes
ENSCPOG00000019272	-	90	57.172	ENSTNIG00000008714	rbm46	95	56.371	Tetraodon_nigroviridis
ENSCPOG00000019272	-	100	87.732	ENSTBEG00000013949	RBM46	100	87.732	Tupaia_belangeri
ENSCPOG00000019272	-	100	89.777	ENSTTRG00000001239	RBM46	100	89.777	Tursiops_truncatus
ENSCPOG00000019272	-	100	91.078	ENSUAMG00000026593	RBM46	100	91.078	Ursus_americanus
ENSCPOG00000019272	-	100	90.892	ENSUMAG00000016442	RBM46	100	90.892	Ursus_maritimus
ENSCPOG00000019272	-	100	91.450	ENSVVUG00000024957	RBM46	99	92.505	Vulpes_vulpes
ENSCPOG00000019272	-	100	53.959	ENSXETG00000032344	-	100	53.959	Xenopus_tropicalis
ENSCPOG00000019272	-	100	70.632	ENSXETG00000022412	-	99	70.632	Xenopus_tropicalis
ENSCPOG00000019272	-	68	70.572	ENSXETG00000032067	-	100	69.293	Xenopus_tropicalis
ENSCPOG00000019272	-	87	60.537	ENSXMAG00000008237	rbm46	94	60.950	Xiphophorus_maculatus