EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000019565 (Gene tree)
Gene ID: 100726732
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 17751 bases
Position: chrDS562915.1:10338440-10356190
Accession: 100726732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000015543	CAF1	PF04857.20	2.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020417	PNLDC1-201	1557	XM_003466365	ENSCPOP00000015543	518 (aa)	XP_003466413	H0VXW2

Gene Model

Click here to download ENSCPOG00000019565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000019565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000019565	PNLDC1	99	78.719	ENSG00000146453	PNLDC1	99	78.719	Homo_sapiens
ENSCPOG00000019565	PNLDC1	99	79.017	ENSAMEG00000015371	PNLDC1	99	79.017	Ailuropoda_melanoleuca
ENSCPOG00000019565	PNLDC1	95	55.773	ENSAPLG00000007014	PNLDC1	97	55.773	Anas_platyrhynchos
ENSCPOG00000019565	PNLDC1	99	54.135	ENSACAG00000013667	PNLDC1	99	54.135	Anolis_carolinensis
ENSCPOG00000019565	PNLDC1	100	77.068	ENSANAG00000034713	PNLDC1	100	77.344	Aotus_nancymaae
ENSCPOG00000019565	PNLDC1	95	81.349	ENSBTAG00000015166	PNLDC1	96	81.102	Bos_taurus
ENSCPOG00000019565	PNLDC1	100	76.692	ENSCJAG00000011865	PNLDC1	99	78.458	Callithrix_jacchus
ENSCPOG00000019565	PNLDC1	100	79.887	ENSCAFG00000000740	PNLDC1	100	79.887	Canis_familiaris
ENSCPOG00000019565	PNLDC1	100	77.154	ENSCAFG00020017742	PNLDC1	100	77.154	Canis_lupus_dingo
ENSCPOG00000019565	PNLDC1	100	77.486	ENSCHIG00000003141	PNLDC1	100	77.486	Capra_hircus
ENSCPOG00000019565	PNLDC1	100	76.504	ENSTSYG00000005606	PNLDC1	100	76.504	Carlito_syrichta
ENSCPOG00000019565	PNLDC1	100	75.483	ENSCAPG00000011893	PNLDC1	100	75.483	Cavia_aperea
ENSCPOG00000019565	PNLDC1	100	77.820	ENSCCAG00000026232	PNLDC1	100	77.820	Cebus_capucinus
ENSCPOG00000019565	PNLDC1	100	79.135	ENSCATG00000033196	PNLDC1	100	79.135	Cercocebus_atys
ENSCPOG00000019565	PNLDC1	99	87.382	ENSCLAG00000003228	PNLDC1	99	87.382	Chinchilla_lanigera
ENSCPOG00000019565	PNLDC1	97	79.457	ENSCSAG00000012478	PNLDC1	99	79.457	Chlorocebus_sabaeus
ENSCPOG00000019565	PNLDC1	96	60.234	ENSCPBG00000004050	PNLDC1	100	60.234	Chrysemys_picta_bellii
ENSCPOG00000019565	PNLDC1	97	79.612	ENSCANG00000043076	PNLDC1	99	79.612	Colobus_angolensis_palliatus
ENSCPOG00000019565	PNLDC1	100	74.624	ENSCGRG00001007470	-	99	74.624	Cricetulus_griseus_chok1gshd
ENSCPOG00000019565	PNLDC1	100	60.728	ENSCGRG00001011981	-	99	60.728	Cricetulus_griseus_chok1gshd
ENSCPOG00000019565	PNLDC1	100	74.624	ENSCGRG00000010221	-	99	74.624	Cricetulus_griseus_crigri
ENSCPOG00000019565	PNLDC1	100	63.218	ENSCGRG00000003103	-	99	63.218	Cricetulus_griseus_crigri
ENSCPOG00000019565	PNLDC1	100	76.548	ENSDNOG00000013709	PNLDC1	100	76.548	Dasypus_novemcinctus
ENSCPOG00000019565	PNLDC1	100	75.746	ENSDORG00000011517	Pnldc1	100	75.746	Dipodomys_ordii
ENSCPOG00000019565	PNLDC1	91	72.840	ENSETEG00000007587	PNLDC1	98	72.840	Echinops_telfairi
ENSCPOG00000019565	PNLDC1	100	73.546	ENSEASG00005019029	PNLDC1	100	73.546	Equus_asinus_asinus
ENSCPOG00000019565	PNLDC1	100	80.263	ENSECAG00000012898	PNLDC1	100	80.263	Equus_caballus
ENSCPOG00000019565	PNLDC1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSCPOG00000019565	PNLDC1	100	79.887	ENSFCAG00000002848	PNLDC1	100	79.887	Felis_catus
ENSCPOG00000019565	PNLDC1	94	56.151	ENSFALG00000012081	PNLDC1	99	56.151	Ficedula_albicollis
ENSCPOG00000019565	PNLDC1	100	86.654	ENSFDAG00000021334	PNLDC1	100	86.654	Fukomys_damarensis
ENSCPOG00000019565	PNLDC1	78	54.976	ENSGALG00000011624	PNLDC1	82	54.976	Gallus_gallus
ENSCPOG00000019565	PNLDC1	99	60.829	ENSGAGG00000015276	PNLDC1	100	62.474	Gopherus_agassizii
ENSCPOG00000019565	PNLDC1	100	78.571	ENSGGOG00000014077	PNLDC1	100	78.571	Gorilla_gorilla
ENSCPOG00000019565	PNLDC1	100	88.346	ENSHGLG00000006889	PNLDC1	100	88.346	Heterocephalus_glaber_female
ENSCPOG00000019565	PNLDC1	100	88.346	ENSHGLG00100018275	PNLDC1	100	88.346	Heterocephalus_glaber_male
ENSCPOG00000019565	PNLDC1	99	81.698	ENSSTOG00000005595	PNLDC1	99	81.698	Ictidomys_tridecemlineatus
ENSCPOG00000019565	PNLDC1	99	79.070	ENSJJAG00000009937	Pnldc1	99	79.070	Jaculus_jaculus
ENSCPOG00000019565	PNLDC1	58	75.578	ENSLAFG00000030189	PNLDC1	89	75.578	Loxodonta_africana
ENSCPOG00000019565	PNLDC1	100	79.135	ENSMFAG00000041296	PNLDC1	100	79.135	Macaca_fascicularis
ENSCPOG00000019565	PNLDC1	100	79.135	ENSMMUG00000004181	PNLDC1	100	79.135	Macaca_mulatta
ENSCPOG00000019565	PNLDC1	100	79.135	ENSMNEG00000034271	PNLDC1	100	79.135	Macaca_nemestrina
ENSCPOG00000019565	PNLDC1	100	76.504	ENSMLEG00000044059	PNLDC1	100	76.504	Mandrillus_leucophaeus
ENSCPOG00000019565	PNLDC1	95	55.992	ENSMGAG00000012470	PNLDC1	97	55.992	Meleagris_gallopavo
ENSCPOG00000019565	PNLDC1	99	59.733	ENSMAUG00000012298	Pnldc1	100	59.733	Mesocricetus_auratus
ENSCPOG00000019565	PNLDC1	100	77.632	ENSMICG00000008021	PNLDC1	100	77.632	Microcebus_murinus
ENSCPOG00000019565	PNLDC1	100	79.588	ENSMOCG00000014287	Pnldc1	100	79.588	Microtus_ochrogaster
ENSCPOG00000019565	PNLDC1	99	69.434	ENSMODG00000007420	PNLDC1	99	69.434	Monodelphis_domestica
ENSCPOG00000019565	PNLDC1	100	79.323	MGP_CAROLIEiJ_G0021045	Pnldc1	100	79.323	Mus_caroli
ENSCPOG00000019565	PNLDC1	100	80.451	ENSMUSG00000073460	Pnldc1	100	83.142	Mus_musculus
ENSCPOG00000019565	PNLDC1	100	79.699	MGP_PahariEiJ_G0023361	Pnldc1	100	79.699	Mus_pahari
ENSCPOG00000019565	PNLDC1	100	79.511	MGP_SPRETEiJ_G0021975	Pnldc1	100	79.511	Mus_spretus
ENSCPOG00000019565	PNLDC1	99	79.206	ENSMPUG00000004920	PNLDC1	99	79.206	Mustela_putorius_furo
ENSCPOG00000019565	PNLDC1	100	78.571	ENSMLUG00000000747	PNLDC1	100	78.571	Myotis_lucifugus
ENSCPOG00000019565	PNLDC1	100	80.639	ENSNGAG00000017714	Pnldc1	99	80.639	Nannospalax_galili
ENSCPOG00000019565	PNLDC1	97	79.377	ENSNLEG00000011282	PNLDC1	99	79.377	Nomascus_leucogenys
ENSCPOG00000019565	PNLDC1	59	57.321	ENSMEUG00000011926	-	64	57.321	Notamacropus_eugenii
ENSCPOG00000019565	PNLDC1	53	58.478	ENSMEUG00000014042	-	100	58.478	Notamacropus_eugenii
ENSCPOG00000019565	PNLDC1	79	76.127	ENSOPRG00000003813	PNLDC1	79	76.127	Ochotona_princeps
ENSCPOG00000019565	PNLDC1	100	87.030	ENSODEG00000008047	PNLDC1	100	87.030	Octodon_degus
ENSCPOG00000019565	PNLDC1	99	53.484	ENSOANG00000012199	PNLDC1	99	54.991	Ornithorhynchus_anatinus
ENSCPOG00000019565	PNLDC1	100	78.759	ENSOCUG00000013867	PNLDC1	100	78.759	Oryctolagus_cuniculus
ENSCPOG00000019565	PNLDC1	99	79.434	ENSOGAG00000007331	PNLDC1	100	79.434	Otolemur_garnettii
ENSCPOG00000019565	PNLDC1	100	77.820	ENSOARG00000004585	PNLDC1	100	77.820	Ovis_aries
ENSCPOG00000019565	PNLDC1	100	78.571	ENSPPAG00000026651	PNLDC1	100	78.571	Pan_paniscus
ENSCPOG00000019565	PNLDC1	100	79.699	ENSPPRG00000012854	PNLDC1	100	79.699	Panthera_pardus
ENSCPOG00000019565	PNLDC1	95	78.854	ENSPTIG00000011501	PNLDC1	95	78.854	Panthera_tigris_altaica
ENSCPOG00000019565	PNLDC1	100	78.571	ENSPTRG00000018762	PNLDC1	100	78.571	Pan_troglodytes
ENSCPOG00000019565	PNLDC1	100	79.323	ENSPANG00000022009	PNLDC1	100	79.323	Papio_anubis
ENSCPOG00000019565	PNLDC1	50	63.462	ENSPSIG00000011419	PNLDC1	86	63.462	Pelodiscus_sinensis
ENSCPOG00000019565	PNLDC1	100	80.075	ENSPEMG00000016301	Pnldc1	99	80.075	Peromyscus_maniculatus_bairdii
ENSCPOG00000019565	PNLDC1	82	72.045	ENSPCIG00000023412	PNLDC1	100	72.045	Phascolarctos_cinereus
ENSCPOG00000019565	PNLDC1	100	73.823	ENSPPYG00000017148	PNLDC1	100	73.823	Pongo_abelii
ENSCPOG00000019565	PNLDC1	99	67.420	ENSPCAG00000014169	PNLDC1	99	67.420	Procavia_capensis
ENSCPOG00000019565	PNLDC1	100	78.195	ENSPCOG00000025722	PNLDC1	100	78.195	Propithecus_coquereli
ENSCPOG00000019565	PNLDC1	72	80.311	ENSPVAG00000005325	PNLDC1	73	80.311	Pteropus_vampyrus
ENSCPOG00000019565	PNLDC1	100	79.511	ENSRNOG00000023140	Pnldc1	99	82.390	Rattus_norvegicus
ENSCPOG00000019565	PNLDC1	100	78.947	ENSRBIG00000033806	PNLDC1	100	78.947	Rhinopithecus_bieti
ENSCPOG00000019565	PNLDC1	97	80.000	ENSRROG00000043919	PNLDC1	99	80.000	Rhinopithecus_roxellana
ENSCPOG00000019565	PNLDC1	100	78.008	ENSSBOG00000019135	PNLDC1	100	78.008	Saimiri_boliviensis_boliviensis
ENSCPOG00000019565	PNLDC1	95	71.542	ENSSHAG00000015192	PNLDC1	97	71.542	Sarcophilus_harrisii
ENSCPOG00000019565	PNLDC1	50	62.791	ENSSPUG00000004627	PNLDC1	100	56.828	Sphenodon_punctatus
ENSCPOG00000019565	PNLDC1	97	79.183	ENSSSCG00000004046	PNLDC1	100	79.183	Sus_scrofa
ENSCPOG00000019565	PNLDC1	91	56.584	ENSTGUG00000011418	PNLDC1	99	56.584	Taeniopygia_guttata
ENSCPOG00000019565	PNLDC1	96	70.508	ENSTBEG00000009131	PNLDC1	98	70.508	Tupaia_belangeri
ENSCPOG00000019565	PNLDC1	72	72.868	ENSTTRG00000010409	PNLDC1	73	72.868	Tursiops_truncatus
ENSCPOG00000019565	PNLDC1	99	66.481	ENSUAMG00000015783	PNLDC1	99	66.481	Ursus_americanus
ENSCPOG00000019565	PNLDC1	94	72.941	ENSUMAG00000011903	PNLDC1	99	72.941	Ursus_maritimus
ENSCPOG00000019565	PNLDC1	96	80.469	ENSVVUG00000006586	PNLDC1	99	80.533	Vulpes_vulpes