EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000020396 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 2608 bases
Position: chrDS562948.1:5650057-5652664
Accession: 101787900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000015710	DND1_DSRM	PF14709.7	8.5e-29	1	1
ENSCPOP00000015710	RRM_1	PF00076.22	5.7e-37	1	3
ENSCPOP00000015710	RRM_1	PF00076.22	5.7e-37	2	3
ENSCPOP00000015710	RRM_1	PF00076.22	5.7e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020904	-	1506	XM_005000955	ENSCPOP00000015710	501 (aa)	XP_005001012	H0VYC8

Gene Model

Click here to download ENSCPOG00000020396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000020396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000020396	-	95	93.474	ENSCPOG00000010284	-	99	93.319
ENSCPOG00000020396	-	63	70.794	ENSCPOG00000014100	RBM47	60	70.794
ENSCPOG00000020396	-	59	54.667	ENSCPOG00000012415	SYNCRIP	53	54.000
ENSCPOG00000020396	-	50	31.333	ENSCPOG00000008327	TIA1	71	31.333
ENSCPOG00000020396	-	92	70.096	ENSCPOG00000009807	A1CF	88	70.096
ENSCPOG00000020396	-	99	84.170	ENSCPOG00000019272	-	96	84.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000020396	-	95	94.105	ENSG00000151962	RBM46	98	95.385	Homo_sapiens
ENSCPOG00000020396	-	90	64.731	ENSAPOG00000009209	rbm46	90	64.731	Acanthochromis_polyacanthus
ENSCPOG00000020396	-	99	89.279	ENSAMEG00000013290	RBM46	96	89.279	Ailuropoda_melanoleuca
ENSCPOG00000020396	-	90	60.738	ENSACIG00000014500	rbm46	88	60.954	Amphilophus_citrinellus
ENSCPOG00000020396	-	89	65.772	ENSAOCG00000001892	-	86	65.772	Amphiprion_ocellaris
ENSCPOG00000020396	-	89	65.772	ENSAPEG00000017762	rbm46	96	65.772	Amphiprion_percula
ENSCPOG00000020396	-	90	65.708	ENSATEG00000010775	rbm46	85	65.708	Anabas_testudineus
ENSCPOG00000020396	-	93	85.129	ENSAPLG00000005116	RBM46	99	85.129	Anas_platyrhynchos
ENSCPOG00000020396	-	99	83.041	ENSACAG00000015599	RBM46	96	83.041	Anolis_carolinensis
ENSCPOG00000020396	-	95	93.474	ENSANAG00000029193	RBM46	99	93.534	Aotus_nancymaae
ENSCPOG00000020396	-	89	65.132	ENSACLG00000016153	rbm46	83	62.577	Astatotilapia_calliptera
ENSCPOG00000020396	-	90	68.736	ENSAMXG00000009397	rbm46	98	68.736	Astyanax_mexicanus
ENSCPOG00000020396	-	95	60.835	ENSAMXG00000020892	-	95	60.835	Astyanax_mexicanus
ENSCPOG00000020396	-	95	93.474	ENSBTAG00000001696	RBM46	98	93.474	Bos_taurus
ENSCPOG00000020396	-	95	93.053	ENSCJAG00000001768	RBM46	99	93.103	Callithrix_jacchus
ENSCPOG00000020396	-	95	94.105	ENSCAFG00000008473	RBM46	98	94.105	Canis_familiaris
ENSCPOG00000020396	-	99	89.084	ENSCAFG00020002468	RBM46	94	94.194	Canis_lupus_dingo
ENSCPOG00000020396	-	95	93.895	ENSCHIG00000000502	RBM46	98	93.895	Capra_hircus
ENSCPOG00000020396	-	95	93.263	ENSTSYG00000010435	RBM46	99	93.319	Carlito_syrichta
ENSCPOG00000020396	-	95	93.474	ENSCAPG00000011928	-	98	93.474	Cavia_aperea
ENSCPOG00000020396	-	74	98.118	ENSCAPG00000011841	-	99	98.113	Cavia_aperea
ENSCPOG00000020396	-	99	76.389	ENSCCAG00000001323	-	99	78.390	Cebus_capucinus
ENSCPOG00000020396	-	95	94.105	ENSCCAG00000027619	-	99	94.181	Cebus_capucinus
ENSCPOG00000020396	-	95	93.895	ENSCATG00000040148	RBM46	99	93.966	Cercocebus_atys
ENSCPOG00000020396	-	99	91.732	ENSCLAG00000011886	-	98	91.732	Chinchilla_lanigera
ENSCPOG00000020396	-	95	92.842	ENSCLAG00000005846	-	99	92.888	Chinchilla_lanigera
ENSCPOG00000020396	-	99	89.279	ENSCSAG00000003263	RBM46	96	89.279	Chlorocebus_sabaeus
ENSCPOG00000020396	-	99	87.329	ENSCHOG00000003429	RBM46	96	88.109	Choloepus_hoffmanni
ENSCPOG00000020396	-	88	90.068	ENSCPBG00000009314	RBM46	97	90.068	Chrysemys_picta_bellii
ENSCPOG00000020396	-	95	93.895	ENSCANG00000039065	RBM46	99	93.750	Colobus_angolensis_palliatus
ENSCPOG00000020396	-	95	93.684	ENSCGRG00001016714	Rbm46	99	93.534	Cricetulus_griseus_chok1gshd
ENSCPOG00000020396	-	95	93.684	ENSCGRG00000011738	Rbm46	99	93.534	Cricetulus_griseus_crigri
ENSCPOG00000020396	-	89	59.598	ENSCSEG00000005530	rbm46	96	59.598	Cynoglossus_semilaevis
ENSCPOG00000020396	-	95	62.162	ENSCVAG00000021013	rbm46	98	62.162	Cyprinodon_variegatus
ENSCPOG00000020396	-	97	63.618	ENSDARG00000079452	rbm46	96	63.928	Danio_rerio
ENSCPOG00000020396	-	99	88.889	ENSDNOG00000016195	RBM46	96	88.889	Dasypus_novemcinctus
ENSCPOG00000020396	-	95	93.684	ENSDORG00000006405	Rbm46	99	93.966	Dipodomys_ordii
ENSCPOG00000020396	-	100	86.434	ENSETEG00000014902	RBM46	97	86.434	Echinops_telfairi
ENSCPOG00000020396	-	99	87.524	ENSEASG00005015821	RBM46	96	87.524	Equus_asinus_asinus
ENSCPOG00000020396	-	95	92.421	ENSECAG00000007649	RBM46	98	92.421	Equus_caballus
ENSCPOG00000020396	-	99	85.185	ENSEEUG00000011824	RBM46	96	85.185	Erinaceus_europaeus
ENSCPOG00000020396	-	76	69.509	ENSELUG00000008166	rbm46	98	68.286	Esox_lucius
ENSCPOG00000020396	-	95	94.526	ENSFCAG00000029812	RBM46	99	94.397	Felis_catus
ENSCPOG00000020396	-	94	82.241	ENSFALG00000013157	RBM46	93	82.241	Ficedula_albicollis
ENSCPOG00000020396	-	100	84.884	ENSFDAG00000019281	-	97	84.884	Fukomys_damarensis
ENSCPOG00000020396	-	99	89.157	ENSFDAG00000006445	-	95	89.495	Fukomys_damarensis
ENSCPOG00000020396	-	87	58.864	ENSFHEG00000013257	rbm46	96	58.864	Fundulus_heteroclitus
ENSCPOG00000020396	-	94	77.282	ENSGALG00000009278	RBM46	99	77.282	Gallus_gallus
ENSCPOG00000020396	-	57	80.836	ENSGAFG00000020245	rbm46	67	80.836	Gambusia_affinis
ENSCPOG00000020396	-	93	90.343	ENSGAGG00000002019	RBM46	89	90.343	Gopherus_agassizii
ENSCPOG00000020396	-	95	94.316	ENSGGOG00000001876	RBM46	99	94.397	Gorilla_gorilla
ENSCPOG00000020396	-	89	61.883	ENSHBUG00000009609	rbm46	91	66.746	Haplochromis_burtoni
ENSCPOG00000020396	-	99	75.301	ENSHGLG00000010742	-	97	75.152	Heterocephalus_glaber_female
ENSCPOG00000020396	-	98	73.725	ENSHGLG00000002940	-	97	73.725	Heterocephalus_glaber_female
ENSCPOG00000020396	-	98	82.961	ENSHGLG00000002463	-	99	91.628	Heterocephalus_glaber_female
ENSCPOG00000020396	-	99	75.301	ENSHGLG00100004977	-	97	75.152	Heterocephalus_glaber_male
ENSCPOG00000020396	-	98	70.392	ENSHGLG00100018987	-	97	70.392	Heterocephalus_glaber_male
ENSCPOG00000020396	-	95	91.579	ENSHGLG00100012752	-	99	91.379	Heterocephalus_glaber_male
ENSCPOG00000020396	-	92	50.649	ENSHCOG00000012998	rbm46	90	51.096	Hippocampus_comes
ENSCPOG00000020396	-	93	66.460	ENSIPUG00000024038	rbm46	97	66.186	Ictalurus_punctatus
ENSCPOG00000020396	-	95	94.316	ENSSTOG00000007918	RBM46	99	94.397	Ictidomys_tridecemlineatus
ENSCPOG00000020396	-	95	91.632	ENSJJAG00000003902	Rbm46	99	91.649	Jaculus_jaculus
ENSCPOG00000020396	-	92	65.042	ENSKMAG00000015127	rbm46	87	65.042	Kryptolebias_marmoratus
ENSCPOG00000020396	-	99	81.800	ENSLACG00000002062	RBM46	96	81.800	Latimeria_chalumnae
ENSCPOG00000020396	-	99	70.020	ENSLOCG00000008298	rbm46	99	74.242	Lepisosteus_oculatus
ENSCPOG00000020396	-	93	93.750	ENSLAFG00000015448	RBM46	99	93.750	Loxodonta_africana
ENSCPOG00000020396	-	95	94.316	ENSMFAG00000043485	RBM46	99	94.397	Macaca_fascicularis
ENSCPOG00000020396	-	95	94.316	ENSMMUG00000021147	RBM46	98	94.316	Macaca_mulatta
ENSCPOG00000020396	-	95	94.316	ENSMNEG00000002787	RBM46	99	94.397	Macaca_nemestrina
ENSCPOG00000020396	-	95	93.684	ENSMLEG00000029756	RBM46	99	93.750	Mandrillus_leucophaeus
ENSCPOG00000020396	-	89	65.784	ENSMAMG00000009093	rbm46	88	65.784	Mastacembelus_armatus
ENSCPOG00000020396	-	91	64.770	ENSMZEG00005027849	rbm46	94	65.284	Maylandia_zebra
ENSCPOG00000020396	-	93	78.326	ENSMGAG00000001457	RBM46	99	78.326	Meleagris_gallopavo
ENSCPOG00000020396	-	95	93.684	ENSMAUG00000009911	Rbm46	99	93.534	Mesocricetus_auratus
ENSCPOG00000020396	-	95	93.474	ENSMICG00000042747	RBM46	99	93.534	Microcebus_murinus
ENSCPOG00000020396	-	95	93.895	ENSMOCG00000001188	Rbm46	99	93.750	Microtus_ochrogaster
ENSCPOG00000020396	-	90	63.774	ENSMMOG00000011214	rbm46	91	60.729	Mola_mola
ENSCPOG00000020396	-	93	93.148	ENSMODG00000001302	RBM46	80	93.148	Monodelphis_domestica
ENSCPOG00000020396	-	88	63.431	ENSMALG00000006185	rbm46	93	63.288	Monopterus_albus
ENSCPOG00000020396	-	95	93.895	MGP_CAROLIEiJ_G0025101	Rbm46	99	93.750	Mus_caroli
ENSCPOG00000020396	-	95	94.105	ENSMUSG00000033882	Rbm46	99	93.966	Mus_musculus
ENSCPOG00000020396	-	95	93.684	MGP_PahariEiJ_G0026544	Rbm46	99	93.534	Mus_pahari
ENSCPOG00000020396	-	95	93.895	MGP_SPRETEiJ_G0026043	Rbm46	99	93.750	Mus_spretus
ENSCPOG00000020396	-	95	94.316	ENSMPUG00000005670	RBM46	98	94.316	Mustela_putorius_furo
ENSCPOG00000020396	-	99	88.521	ENSMLUG00000003221	RBM46	96	88.521	Myotis_lucifugus
ENSCPOG00000020396	-	95	93.053	ENSNGAG00000004231	Rbm46	99	92.888	Nannospalax_galili
ENSCPOG00000020396	-	89	65.919	ENSNBRG00000000273	rbm46	84	65.919	Neolamprologus_brichardi
ENSCPOG00000020396	-	95	94.105	ENSNLEG00000006184	RBM46	99	94.181	Nomascus_leucogenys
ENSCPOG00000020396	-	83	93.510	ENSMEUG00000013328	RBM46	99	93.415	Notamacropus_eugenii
ENSCPOG00000020396	-	56	95.357	ENSOPRG00000007136	RBM46	99	95.357	Ochotona_princeps
ENSCPOG00000020396	-	95	91.158	ENSODEG00000000735	-	99	91.164	Octodon_degus
ENSCPOG00000020396	-	99	90.982	ENSODEG00000018002	-	95	91.515	Octodon_degus
ENSCPOG00000020396	-	89	66.000	ENSONIG00000014096	rbm46	96	66.000	Oreochromis_niloticus
ENSCPOG00000020396	-	93	86.296	ENSOANG00000002141	RBM46	96	86.111	Ornithorhynchus_anatinus
ENSCPOG00000020396	-	99	89.279	ENSOCUG00000017859	RBM46	96	89.279	Oryctolagus_cuniculus
ENSCPOG00000020396	-	93	62.232	ENSORLG00000002429	rbm46	91	62.527	Oryzias_latipes
ENSCPOG00000020396	-	93	62.368	ENSORLG00020022154	rbm46	85	62.447	Oryzias_latipes_hni
ENSCPOG00000020396	-	98	60.569	ENSORLG00015020234	rbm46	97	61.523	Oryzias_latipes_hsok
ENSCPOG00000020396	-	89	63.415	ENSOMEG00000022580	rbm46	86	63.415	Oryzias_melastigma
ENSCPOG00000020396	-	99	89.279	ENSOGAG00000005647	RBM46	96	89.279	Otolemur_garnettii
ENSCPOG00000020396	-	95	93.684	ENSOARG00000016406	RBM46	98	93.684	Ovis_aries
ENSCPOG00000020396	-	95	94.316	ENSPPAG00000043236	RBM46	99	94.397	Pan_paniscus
ENSCPOG00000020396	-	95	94.316	ENSPPRG00000009416	RBM46	99	94.181	Panthera_pardus
ENSCPOG00000020396	-	95	94.316	ENSPTIG00000017449	RBM46	99	94.181	Panthera_tigris_altaica
ENSCPOG00000020396	-	95	94.316	ENSPTRG00000016538	RBM46	99	94.397	Pan_troglodytes
ENSCPOG00000020396	-	95	94.316	ENSPANG00000004186	RBM46	99	94.397	Papio_anubis
ENSCPOG00000020396	-	100	64.547	ENSPKIG00000015334	rbm46	91	64.547	Paramormyrops_kingsleyae
ENSCPOG00000020396	-	94	89.619	ENSPSIG00000006429	RBM46	96	89.619	Pelodiscus_sinensis
ENSCPOG00000020396	-	89	62.332	ENSPMGG00000019872	rbm46	92	81.648	Periophthalmus_magnuspinnatus
ENSCPOG00000020396	-	95	93.684	ENSPEMG00000013899	Rbm46	99	93.534	Peromyscus_maniculatus_bairdii
ENSCPOG00000020396	-	95	93.263	ENSPCIG00000029626	RBM46	98	93.263	Phascolarctos_cinereus
ENSCPOG00000020396	-	90	79.322	ENSPFOG00000001079	rbm46	95	79.322	Poecilia_formosa
ENSCPOG00000020396	-	90	64.989	ENSPLAG00000004541	rbm46	80	64.989	Poecilia_latipinna
ENSCPOG00000020396	-	90	66.150	ENSPMEG00000015724	rbm46	92	66.150	Poecilia_mexicana
ENSCPOG00000020396	-	90	66.079	ENSPREG00000014464	rbm46	95	66.079	Poecilia_reticulata
ENSCPOG00000020396	-	99	89.391	ENSPPYG00000015144	RBM46	95	89.391	Pongo_abelii
ENSCPOG00000020396	-	99	82.066	ENSPCAG00000003110	RBM46	96	82.846	Procavia_capensis
ENSCPOG00000020396	-	95	92.632	ENSPCOG00000024347	RBM46	99	92.672	Propithecus_coquereli
ENSCPOG00000020396	-	99	89.084	ENSPVAG00000008376	RBM46	96	89.084	Pteropus_vampyrus
ENSCPOG00000020396	-	96	65.200	ENSPNAG00000025312	rbm46	96	64.940	Pygocentrus_nattereri
ENSCPOG00000020396	-	99	88.889	ENSRNOG00000025823	Rbm46	96	88.889	Rattus_norvegicus
ENSCPOG00000020396	-	95	92.842	ENSRBIG00000032583	RBM46	99	93.103	Rhinopithecus_bieti
ENSCPOG00000020396	-	95	93.053	ENSRROG00000044288	RBM46	99	93.319	Rhinopithecus_roxellana
ENSCPOG00000020396	-	95	93.895	ENSSBOG00000033028	RBM46	99	93.966	Saimiri_boliviensis_boliviensis
ENSCPOG00000020396	-	99	88.499	ENSSHAG00000012596	RBM46	96	88.499	Sarcophilus_harrisii
ENSCPOG00000020396	-	98	67.936	ENSSFOG00015000087	rbm46	94	67.335	Scleropages_formosus
ENSCPOG00000020396	-	91	62.637	ENSSMAG00000017042	rbm46	95	62.637	Scophthalmus_maximus
ENSCPOG00000020396	-	90	66.154	ENSSDUG00000020645	rbm46	86	67.338	Seriola_dumerili
ENSCPOG00000020396	-	99	89.084	ENSSARG00000006520	RBM46	96	89.084	Sorex_araneus
ENSCPOG00000020396	-	99	83.915	ENSSPUG00000012525	-	96	83.915	Sphenodon_punctatus
ENSCPOG00000020396	-	98	85.193	ENSSPUG00000004773	-	98	87.924	Sphenodon_punctatus
ENSCPOG00000020396	-	90	63.496	ENSSPAG00000013697	rbm46	94	63.496	Stegastes_partitus
ENSCPOG00000020396	-	95	93.895	ENSSSCG00000008994	RBM46	98	93.895	Sus_scrofa
ENSCPOG00000020396	-	93	82.328	ENSTGUG00000005307	RBM46	99	82.328	Taeniopygia_guttata
ENSCPOG00000020396	-	89	64.719	ENSTRUG00000004237	rbm46	89	64.865	Takifugu_rubripes
ENSCPOG00000020396	-	89	62.719	ENSTNIG00000008714	rbm46	83	62.719	Tetraodon_nigroviridis
ENSCPOG00000020396	-	99	85.855	ENSTBEG00000013949	RBM46	95	85.855	Tupaia_belangeri
ENSCPOG00000020396	-	99	87.719	ENSTTRG00000001239	RBM46	96	87.719	Tursiops_truncatus
ENSCPOG00000020396	-	95	94.316	ENSUAMG00000026593	RBM46	98	94.316	Ursus_americanus
ENSCPOG00000020396	-	95	94.105	ENSUMAG00000016442	RBM46	98	94.105	Ursus_maritimus
ENSCPOG00000020396	-	95	94.316	ENSVVUG00000024957	RBM46	99	94.397	Vulpes_vulpes
ENSCPOG00000020396	-	72	72.452	ENSXETG00000032067	-	98	71.901	Xenopus_tropicalis
ENSCPOG00000020396	-	92	77.489	ENSXETG00000022412	-	95	73.333	Xenopus_tropicalis
ENSCPOG00000020396	-	93	56.383	ENSXETG00000032344	-	95	55.010	Xenopus_tropicalis
ENSCPOG00000020396	-	90	63.734	ENSXMAG00000008237	rbm46	91	63.734	Xiphophorus_maculatus