EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000020777 (Gene tree)
Gene ID: 100723557
Gene Symbol: -
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 29158 bases
Position: chrDS562871.1:461333-490490
Accession: 100723557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000015022	Urb2	PF10441.9	6.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000026096	-	2904	XM_013156270	ENSCPOP00000015022	968 (aa)	XP_013011724	H0VWE4

Gene Model

Click here to download ENSCPOG00000020777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000020777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000020777	-	100	81.322	ENSG00000135763	URB2	99	85.542	Homo_sapiens
ENSCPOG00000020777	-	83	41.718	ENSAPOG00000000608	urb2	55	40.449	Acanthochromis_polyacanthus
ENSCPOG00000020777	-	99	79.023	ENSAMEG00000009206	URB2	64	81.790	Ailuropoda_melanoleuca
ENSCPOG00000020777	-	98	40.682	ENSAOCG00000019961	urb2	63	39.899	Amphiprion_ocellaris
ENSCPOG00000020777	-	98	40.682	ENSAPEG00000005263	urb2	63	39.899	Amphiprion_percula
ENSCPOG00000020777	-	99	39.733	ENSATEG00000020930	urb2	61	39.733	Anabas_testudineus
ENSCPOG00000020777	-	96	54.196	ENSAPLG00000002998	URB2	61	54.196	Anas_platyrhynchos
ENSCPOG00000020777	-	100	55.183	ENSACAG00000001285	URB2	64	55.183	Anolis_carolinensis
ENSCPOG00000020777	-	100	81.609	ENSANAG00000033963	URB2	64	84.877	Aotus_nancymaae
ENSCPOG00000020777	-	84	38.071	ENSACLG00000009254	urb2	55	39.326	Astatotilapia_calliptera
ENSCPOG00000020777	-	98	44.012	ENSAMXG00000003474	urb2	64	44.012	Astyanax_mexicanus
ENSCPOG00000020777	-	99	76.163	ENSBTAG00000010180	URB2	64	78.704	Bos_taurus
ENSCPOG00000020777	-	100	80.460	ENSCJAG00000010968	URB2	64	83.642	Callithrix_jacchus
ENSCPOG00000020777	-	100	77.011	ENSCAFG00000012118	URB2	64	79.630	Canis_familiaris
ENSCPOG00000020777	-	90	71.736	ENSCAFG00020027217	URB2	61	74.107	Canis_lupus_dingo
ENSCPOG00000020777	-	99	76.453	ENSCHIG00000014513	URB2	64	79.012	Capra_hircus
ENSCPOG00000020777	-	99	79.023	ENSTSYG00000006924	URB2	64	82.407	Carlito_syrichta
ENSCPOG00000020777	-	100	81.897	ENSCCAG00000023932	URB2	64	85.185	Cebus_capucinus
ENSCPOG00000020777	-	100	80.172	ENSCATG00000043366	URB2	64	83.333	Cercocebus_atys
ENSCPOG00000020777	-	100	88.253	ENSCLAG00000006268	URB2	64	90.966	Chinchilla_lanigera
ENSCPOG00000020777	-	100	79.598	ENSCSAG00000010599	URB2	64	82.716	Chlorocebus_sabaeus
ENSCPOG00000020777	-	99	60.245	ENSCPBG00000006191	URB2	62	60.245	Chrysemys_picta_bellii
ENSCPOG00000020777	-	100	79.885	ENSCANG00000023711	URB2	64	83.025	Colobus_angolensis_palliatus
ENSCPOG00000020777	-	100	76.724	ENSCGRG00001009591	Urb2	64	79.938	Cricetulus_griseus_chok1gshd
ENSCPOG00000020777	-	100	76.724	ENSCGRG00000011259	Urb2	64	79.938	Cricetulus_griseus_crigri
ENSCPOG00000020777	-	99	40.489	ENSCSEG00000000299	urb2	63	40.489	Cynoglossus_semilaevis
ENSCPOG00000020777	-	99	41.808	ENSCVAG00000011011	urb2	61	41.808	Cyprinodon_variegatus
ENSCPOG00000020777	-	93	46.970	ENSDARG00000003217	urb2	99	61.468	Danio_rerio
ENSCPOG00000020777	-	96	63.518	ENSDNOG00000043064	URB2	64	66.078	Dasypus_novemcinctus
ENSCPOG00000020777	-	100	77.011	ENSDORG00000014975	Urb2	64	80.247	Dipodomys_ordii
ENSCPOG00000020777	-	92	75.000	ENSETEG00000002869	URB2	59	77.778	Echinops_telfairi
ENSCPOG00000020777	-	99	79.310	ENSEASG00005012060	URB2	64	83.642	Equus_asinus_asinus
ENSCPOG00000020777	-	99	79.310	ENSECAG00000012338	URB2	64	83.642	Equus_caballus
ENSCPOG00000020777	-	88	79.433	ENSEEUG00000002669	URB2	56	79.433	Erinaceus_europaeus
ENSCPOG00000020777	-	99	50.000	ENSELUG00000014647	urb2	60	50.303	Esox_lucius
ENSCPOG00000020777	-	100	78.161	ENSFCAG00000007662	URB2	64	81.481	Felis_catus
ENSCPOG00000020777	-	99	55.352	ENSFALG00000003385	URB2	62	55.352	Ficedula_albicollis
ENSCPOG00000020777	-	100	87.246	ENSFDAG00000021079	URB2	64	91.277	Fukomys_damarensis
ENSCPOG00000020777	-	92	39.889	ENSFHEG00000010357	urb2	59	39.889	Fundulus_heteroclitus
ENSCPOG00000020777	-	91	45.231	ENSGMOG00000012459	urb2	61	45.231	Gadus_morhua
ENSCPOG00000020777	-	100	58.716	ENSGALG00000011101	URB2	62	58.716	Gallus_gallus
ENSCPOG00000020777	-	99	46.296	ENSGACG00000016179	urb2	62	46.605	Gasterosteus_aculeatus
ENSCPOG00000020777	-	99	60.550	ENSGAGG00000021879	URB2	62	60.550	Gopherus_agassizii
ENSCPOG00000020777	-	100	80.172	ENSGGOG00000025643	URB2	64	83.333	Gorilla_gorilla
ENSCPOG00000020777	-	99	39.277	ENSHBUG00000018469	urb2	63	39.899	Haplochromis_burtoni
ENSCPOG00000020777	-	96	88.158	ENSHGLG00000016561	URB2	62	92.857	Heterocephalus_glaber_female
ENSCPOG00000020777	-	100	87.536	ENSHGLG00100001838	URB2	63	91.589	Heterocephalus_glaber_male
ENSCPOG00000020777	-	99	45.946	ENSIPUG00000020315	urb2	61	45.946	Ictalurus_punctatus
ENSCPOG00000020777	-	100	78.134	ENSSTOG00000025323	URB2	64	80.864	Ictidomys_tridecemlineatus
ENSCPOG00000020777	-	100	78.551	ENSJJAG00000011998	Urb2	67	82.243	Jaculus_jaculus
ENSCPOG00000020777	-	99	37.632	ENSKMAG00000020129	urb2	61	37.632	Kryptolebias_marmoratus
ENSCPOG00000020777	-	99	55.352	ENSLACG00000002038	URB2	62	55.352	Latimeria_chalumnae
ENSCPOG00000020777	-	97	49.849	ENSLOCG00000015462	urb2	63	50.151	Lepisosteus_oculatus
ENSCPOG00000020777	-	99	75.287	ENSLAFG00000012484	URB2	64	78.086	Loxodonta_africana
ENSCPOG00000020777	-	100	80.172	ENSMFAG00000039905	URB2	64	83.333	Macaca_fascicularis
ENSCPOG00000020777	-	100	80.172	ENSMMUG00000009509	URB2	64	83.333	Macaca_mulatta
ENSCPOG00000020777	-	96	85.315	ENSMNEG00000038762	URB2	63	85.315	Macaca_nemestrina
ENSCPOG00000020777	-	100	80.172	ENSMLEG00000043252	URB2	64	83.333	Mandrillus_leucophaeus
ENSCPOG00000020777	-	99	39.257	ENSMAMG00000020365	urb2	61	39.257	Mastacembelus_armatus
ENSCPOG00000020777	-	99	39.036	ENSMZEG00005011027	urb2	63	39.646	Maylandia_zebra
ENSCPOG00000020777	-	91	52.893	ENSMGAG00000012073	URB2	60	52.893	Meleagris_gallopavo
ENSCPOG00000020777	-	92	83.688	ENSMAUG00000017980	Urb2	62	83.688	Mesocricetus_auratus
ENSCPOG00000020777	-	99	79.023	ENSMICG00000033302	URB2	64	82.716	Microcebus_murinus
ENSCPOG00000020777	-	100	76.724	ENSMOCG00000020369	Urb2	64	79.938	Microtus_ochrogaster
ENSCPOG00000020777	-	98	41.379	ENSMALG00000006529	urb2	58	41.379	Monopterus_albus
ENSCPOG00000020777	-	100	74.138	ENSMUSG00000031976	Urb2	64	76.852	Mus_musculus
ENSCPOG00000020777	-	100	78.736	ENSMPUG00000012438	URB2	64	81.173	Mustela_putorius_furo
ENSCPOG00000020777	-	100	76.012	ENSNGAG00000016524	Urb2	64	79.503	Nannospalax_galili
ENSCPOG00000020777	-	100	80.747	ENSNLEG00000014450	URB2	64	83.951	Nomascus_leucogenys
ENSCPOG00000020777	-	86	63.192	ENSMEUG00000016434	URB2	57	65.724	Notamacropus_eugenii
ENSCPOG00000020777	-	96	72.128	ENSOPRG00000009906	URB2	61	72.128	Ochotona_princeps
ENSCPOG00000020777	-	100	88.696	ENSODEG00000005593	URB2	64	92.523	Octodon_degus
ENSCPOG00000020777	-	99	44.134	ENSONIG00000017078	urb2	63	45.133	Oreochromis_niloticus
ENSCPOG00000020777	-	99	58.642	ENSOANG00000013732	URB2	64	58.642	Ornithorhynchus_anatinus
ENSCPOG00000020777	-	99	80.460	ENSOCUG00000010700	URB2	64	83.642	Oryctolagus_cuniculus
ENSCPOG00000020777	-	99	42.857	ENSORLG00000010915	urb2	57	42.857	Oryzias_latipes
ENSCPOG00000020777	-	99	43.143	ENSORLG00020003361	urb2	57	43.143	Oryzias_latipes_hni
ENSCPOG00000020777	-	99	43.143	ENSORLG00015001534	urb2	62	43.143	Oryzias_latipes_hsok
ENSCPOG00000020777	-	99	41.274	ENSOMEG00000010076	urb2	59	41.274	Oryzias_melastigma
ENSCPOG00000020777	-	99	78.161	ENSOGAG00000003021	URB2	64	81.481	Otolemur_garnettii
ENSCPOG00000020777	-	99	76.453	ENSOARG00000003102	URB2	64	79.012	Ovis_aries
ENSCPOG00000020777	-	100	81.897	ENSPPAG00000040629	URB2	64	85.185	Pan_paniscus
ENSCPOG00000020777	-	100	80.247	ENSPPRG00000012767	URB2	64	80.247	Panthera_pardus
ENSCPOG00000020777	-	100	80.556	ENSPTIG00000012577	URB2	64	80.556	Panthera_tigris_altaica
ENSCPOG00000020777	-	100	81.609	ENSPTRG00000002092	URB2	64	84.877	Pan_troglodytes
ENSCPOG00000020777	-	96	85.315	ENSPANG00000002245	URB2	63	85.315	Papio_anubis
ENSCPOG00000020777	-	99	48.494	ENSPKIG00000005787	urb2	64	48.494	Paramormyrops_kingsleyae
ENSCPOG00000020777	-	99	59.633	ENSPSIG00000002690	URB2	62	59.633	Pelodiscus_sinensis
ENSCPOG00000020777	-	93	76.437	ENSPEMG00000019551	Urb2	62	79.630	Peromyscus_maniculatus_bairdii
ENSCPOG00000020777	-	100	70.154	ENSPCIG00000030071	URB2	64	70.154	Phascolarctos_cinereus
ENSCPOG00000020777	-	99	43.558	ENSPFOG00000014330	urb2	61	43.558	Poecilia_formosa
ENSCPOG00000020777	-	99	39.601	ENSPLAG00000014654	urb2	61	39.011	Poecilia_latipinna
ENSCPOG00000020777	-	99	40.456	ENSPMEG00000012356	urb2	61	40.223	Poecilia_mexicana
ENSCPOG00000020777	-	99	39.316	ENSPREG00000010268	urb2	61	38.736	Poecilia_reticulata
ENSCPOG00000020777	-	99	79.885	ENSPPYG00000000123	URB2	64	84.259	Pongo_abelii
ENSCPOG00000020777	-	99	79.598	ENSPCOG00000023537	URB2	64	83.642	Propithecus_coquereli
ENSCPOG00000020777	-	100	75.389	ENSPVAG00000002108	URB2	64	75.389	Pteropus_vampyrus
ENSCPOG00000020777	-	84	38.579	ENSPNYG00000016840	urb2	55	39.888	Pundamilia_nyererei
ENSCPOG00000020777	-	100	45.210	ENSPNAG00000013684	urb2	64	45.210	Pygocentrus_nattereri
ENSCPOG00000020777	-	100	77.874	ENSRNOG00000026853	Urb2	62	80.864	Rattus_norvegicus
ENSCPOG00000020777	-	100	80.172	ENSRBIG00000037937	URB2	64	83.333	Rhinopithecus_bieti
ENSCPOG00000020777	-	100	79.598	ENSRROG00000039854	URB2	64	82.716	Rhinopithecus_roxellana
ENSCPOG00000020777	-	100	81.322	ENSSBOG00000023055	URB2	64	84.568	Saimiri_boliviensis_boliviensis
ENSCPOG00000020777	-	100	67.049	ENSSHAG00000014735	URB2	64	69.231	Sarcophilus_harrisii
ENSCPOG00000020777	-	96	44.518	ENSSFOG00015015432	urb2	63	44.518	Scleropages_formosus
ENSCPOG00000020777	-	83	40.000	ENSSMAG00000004984	urb2	54	40.000	Scophthalmus_maximus
ENSCPOG00000020777	-	99	39.440	ENSSDUG00000000902	urb2	63	39.186	Seriola_dumerili
ENSCPOG00000020777	-	100	58.523	ENSSPUG00000018549	URB2	64	60.856	Sphenodon_punctatus
ENSCPOG00000020777	-	99	54.321	ENSSPAG00000013632	urb2	59	54.321	Stegastes_partitus
ENSCPOG00000020777	-	99	80.511	ENSSSCG00000010186	URB2	64	80.511	Sus_scrofa
ENSCPOG00000020777	-	99	56.748	ENSTGUG00000009990	URB2	62	56.748	Taeniopygia_guttata
ENSCPOG00000020777	-	99	40.054	ENSTRUG00000008173	urb2	60	40.054	Takifugu_rubripes
ENSCPOG00000020777	-	99	45.706	ENSTNIG00000017689	urb2	63	45.706	Tetraodon_nigroviridis
ENSCPOG00000020777	-	99	61.905	ENSTTRG00000014864	URB2	64	61.905	Tursiops_truncatus
ENSCPOG00000020777	-	99	79.885	ENSUAMG00000015022	URB2	64	82.716	Ursus_americanus
ENSCPOG00000020777	-	99	79.598	ENSUMAG00000004728	URB2	64	82.407	Ursus_maritimus
ENSCPOG00000020777	-	100	77.011	ENSVVUG00000006747	URB2	64	79.630	Vulpes_vulpes
ENSCPOG00000020777	-	98	47.401	ENSXETG00000023331	urb2	62	47.401	Xenopus_tropicalis
ENSCPOG00000020777	-	99	38.736	ENSXMAG00000015059	urb2	61	38.736	Xiphophorus_maculatus