EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000021069 (Gene tree)
Gene ID: 100727386
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 43747 bases
Position: chrDS562894.1:18011111-18054857
Accession: 100727386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000014248	PRP4	PF08799.11	8.8e-14	1	1
ENSCPOP00000026385	PRP4	PF08799.11	9.4e-14	1	1
ENSCPOP00000014248	Prp18	PF02840.15	4.3e-63	1	1
ENSCPOP00000026385	Prp18	PF02840.15	5.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000023329	-	3005	XM_003468650	ENSCPOP00000014248	342 (aa)	XP_003468698	H0VU75
ENSCPOT00000038713	-	3032	XM_013151295	ENSCPOP00000026385	351 (aa)	XP_013006749	A0A286XLQ6

Gene Model

Click here to download ENSCPOG00000021069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000021069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000021069	-	100	100.000	ENSG00000165630	PRPF18	100	100.000	Homo_sapiens
ENSCPOG00000021069	-	100	85.673	ENSAPOG00000024177	prpf18	100	85.673	Acanthochromis_polyacanthus
ENSCPOG00000021069	-	100	99.415	ENSAMEG00000013591	-	100	99.415	Ailuropoda_melanoleuca
ENSCPOG00000021069	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSCPOG00000021069	-	98	85.672	ENSAOCG00000006572	prpf18	94	83.965	Amphiprion_ocellaris
ENSCPOG00000021069	-	100	85.965	ENSAPEG00000004564	prpf18	100	85.965	Amphiprion_percula
ENSCPOG00000021069	-	100	84.503	ENSATEG00000000303	prpf18	100	84.503	Anabas_testudineus
ENSCPOG00000021069	-	99	91.471	ENSAPLG00000003387	-	99	91.471	Anas_platyrhynchos
ENSCPOG00000021069	-	100	91.860	ENSACAG00000000818	-	100	91.860	Anolis_carolinensis
ENSCPOG00000021069	-	100	99.415	ENSANAG00000037445	-	100	99.415	Aotus_nancymaae
ENSCPOG00000021069	-	100	85.088	ENSACLG00000026296	prpf18	100	85.088	Astatotilapia_calliptera
ENSCPOG00000021069	-	100	84.330	ENSAMXG00000012848	prpf18	100	84.330	Astyanax_mexicanus
ENSCPOG00000021069	-	100	99.123	ENSBTAG00000017244	PRPF18	100	99.123	Bos_taurus
ENSCPOG00000021069	-	98	38.682	WBGene00009320	F32B6.3	97	38.682	Caenorhabditis_elegans
ENSCPOG00000021069	-	100	99.415	ENSCJAG00000009432	-	100	99.415	Callithrix_jacchus
ENSCPOG00000021069	-	100	99.415	ENSCAFG00000004735	-	100	99.415	Canis_familiaris
ENSCPOG00000021069	-	100	99.415	ENSCAFG00020007712	-	100	99.415	Canis_lupus_dingo
ENSCPOG00000021069	-	100	99.123	ENSCHIG00000000499	-	100	99.123	Capra_hircus
ENSCPOG00000021069	-	100	99.123	ENSTSYG00000003517	-	100	99.123	Carlito_syrichta
ENSCPOG00000021069	-	100	99.415	ENSCCAG00000036822	-	100	99.415	Cebus_capucinus
ENSCPOG00000021069	-	100	88.889	ENSCATG00000016633	-	100	88.889	Cercocebus_atys
ENSCPOG00000021069	-	100	99.145	ENSCLAG00000011770	-	100	99.145	Chinchilla_lanigera
ENSCPOG00000021069	-	100	99.715	ENSCSAG00000013109	-	100	99.715	Chlorocebus_sabaeus
ENSCPOG00000021069	-	100	89.326	ENSCPBG00000003100	-	100	89.888	Chrysemys_picta_bellii
ENSCPOG00000021069	-	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSCPOG00000021069	-	99	54.335	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSCPOG00000021069	-	100	99.708	ENSCANG00000034900	-	100	99.708	Colobus_angolensis_palliatus
ENSCPOG00000021069	-	100	99.415	ENSCGRG00001023665	Prpf18	100	99.415	Cricetulus_griseus_chok1gshd
ENSCPOG00000021069	-	100	99.415	ENSCGRG00000014690	Prpf18	100	99.415	Cricetulus_griseus_crigri
ENSCPOG00000021069	-	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSCPOG00000021069	-	100	84.503	ENSCVAG00000012401	prpf18	100	84.503	Cyprinodon_variegatus
ENSCPOG00000021069	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSCPOG00000021069	-	100	98.830	ENSDNOG00000035607	-	100	98.830	Dasypus_novemcinctus
ENSCPOG00000021069	-	100	99.123	ENSDORG00000000858	Prpf18	100	99.123	Dipodomys_ordii
ENSCPOG00000021069	-	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSCPOG00000021069	-	100	87.719	ENSETEG00000015060	-	100	87.719	Echinops_telfairi
ENSCPOG00000021069	-	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSCPOG00000021069	-	100	99.708	ENSEASG00005019373	-	100	99.708	Equus_asinus_asinus
ENSCPOG00000021069	-	100	99.708	ENSECAG00000006997	PRPF18	100	99.708	Equus_caballus
ENSCPOG00000021069	-	92	62.975	ENSEEUG00000001171	-	100	62.975	Erinaceus_europaeus
ENSCPOG00000021069	-	100	82.507	ENSELUG00000022190	prpf18	100	82.507	Esox_lucius
ENSCPOG00000021069	-	100	99.123	ENSFCAG00000004436	-	100	99.123	Felis_catus
ENSCPOG00000021069	-	93	91.077	ENSFALG00000001912	-	97	91.077	Ficedula_albicollis
ENSCPOG00000021069	-	94	99.375	ENSFDAG00000014026	-	100	99.375	Fukomys_damarensis
ENSCPOG00000021069	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSCPOG00000021069	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCPOG00000021069	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSCPOG00000021069	-	100	92.398	ENSGALG00000043593	-	100	92.398	Gallus_gallus
ENSCPOG00000021069	-	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSCPOG00000021069	-	100	81.871	ENSGACG00000012232	prpf18	100	81.871	Gasterosteus_aculeatus
ENSCPOG00000021069	-	100	92.690	ENSGAGG00000016878	-	100	92.690	Gopherus_agassizii
ENSCPOG00000021069	-	93	99.692	ENSGGOG00000025188	-	96	100.000	Gorilla_gorilla
ENSCPOG00000021069	-	100	85.088	ENSHBUG00000010264	prpf18	100	85.088	Haplochromis_burtoni
ENSCPOG00000021069	-	100	99.415	ENSHGLG00000018534	PRPF18	100	99.415	Heterocephalus_glaber_female
ENSCPOG00000021069	-	94	99.688	ENSHGLG00100012161	-	98	99.688	Heterocephalus_glaber_male
ENSCPOG00000021069	-	100	84.503	ENSHCOG00000015987	prpf18	100	84.503	Hippocampus_comes
ENSCPOG00000021069	-	100	82.153	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSCPOG00000021069	-	100	98.291	ENSSTOG00000008735	-	100	98.291	Ictidomys_tridecemlineatus
ENSCPOG00000021069	-	100	72.622	ENSJJAG00000015191	-	100	72.622	Jaculus_jaculus
ENSCPOG00000021069	-	100	100.000	ENSJJAG00000024041	-	100	100.000	Jaculus_jaculus
ENSCPOG00000021069	-	100	83.333	ENSKMAG00000012124	prpf18	100	83.333	Kryptolebias_marmoratus
ENSCPOG00000021069	-	99	83.728	ENSLBEG00000028466	prpf18	99	83.728	Labrus_bergylta
ENSCPOG00000021069	-	100	86.842	ENSLACG00000009885	prpf18	100	86.842	Latimeria_chalumnae
ENSCPOG00000021069	-	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSCPOG00000021069	-	100	100.000	ENSLAFG00000007753	-	100	100.000	Loxodonta_africana
ENSCPOG00000021069	-	100	100.000	ENSMFAG00000000540	-	100	100.000	Macaca_fascicularis
ENSCPOG00000021069	-	100	100.000	ENSMMUG00000015071	PRPF18	100	100.000	Macaca_mulatta
ENSCPOG00000021069	-	100	100.000	ENSMNEG00000024679	-	100	100.000	Macaca_nemestrina
ENSCPOG00000021069	-	100	84.795	ENSMLEG00000031715	-	100	84.795	Mandrillus_leucophaeus
ENSCPOG00000021069	-	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSCPOG00000021069	-	100	85.088	ENSMZEG00005019392	prpf18	100	85.088	Maylandia_zebra
ENSCPOG00000021069	-	100	92.398	ENSMGAG00000005023	-	100	92.398	Meleagris_gallopavo
ENSCPOG00000021069	-	100	99.708	ENSMICG00000006572	-	100	99.708	Microcebus_murinus
ENSCPOG00000021069	-	100	100.000	ENSMOCG00000021468	Prpf18	100	100.000	Microtus_ochrogaster
ENSCPOG00000021069	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSCPOG00000021069	-	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSCPOG00000021069	-	96	92.899	ENSMODG00000016902	-	92	92.899	Monodelphis_domestica
ENSCPOG00000021069	-	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSCPOG00000021069	-	100	99.415	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCPOG00000021069	-	100	99.123	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCPOG00000021069	-	100	99.708	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCPOG00000021069	-	100	98.830	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCPOG00000021069	-	100	99.123	ENSMPUG00000000938	-	100	99.123	Mustela_putorius_furo
ENSCPOG00000021069	-	100	99.123	ENSMLUG00000009200	-	100	99.123	Myotis_lucifugus
ENSCPOG00000021069	-	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSCPOG00000021069	-	100	99.415	ENSNGAG00000012500	-	100	99.415	Nannospalax_galili
ENSCPOG00000021069	-	100	85.088	ENSNBRG00000001778	prpf18	100	85.088	Neolamprologus_brichardi
ENSCPOG00000021069	-	100	100.000	ENSNLEG00000012186	-	100	100.000	Nomascus_leucogenys
ENSCPOG00000021069	-	100	65.497	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSCPOG00000021069	-	77	81.509	ENSOPRG00000002153	-	100	81.509	Ochotona_princeps
ENSCPOG00000021069	-	100	99.123	ENSODEG00000003770	-	100	99.123	Octodon_degus
ENSCPOG00000021069	-	98	84.478	ENSONIG00000014854	prpf18	96	84.478	Oreochromis_niloticus
ENSCPOG00000021069	-	100	94.737	ENSOANG00000015404	-	100	94.737	Ornithorhynchus_anatinus
ENSCPOG00000021069	-	100	99.708	ENSOCUG00000027756	-	100	95.614	Oryctolagus_cuniculus
ENSCPOG00000021069	-	100	82.906	ENSORLG00000010293	prpf18	100	82.906	Oryzias_latipes
ENSCPOG00000021069	-	100	84.503	ENSORLG00020001530	prpf18	100	84.503	Oryzias_latipes_hni
ENSCPOG00000021069	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSCPOG00000021069	-	100	85.673	ENSOMEG00000009167	prpf18	100	85.673	Oryzias_melastigma
ENSCPOG00000021069	-	100	98.830	ENSOGAG00000007294	-	100	98.830	Otolemur_garnettii
ENSCPOG00000021069	-	100	98.860	ENSOARG00000006243	-	100	98.860	Ovis_aries
ENSCPOG00000021069	-	100	100.000	ENSPPAG00000041959	-	100	100.000	Pan_paniscus
ENSCPOG00000021069	-	100	99.123	ENSPPRG00000000107	-	100	99.123	Panthera_pardus
ENSCPOG00000021069	-	100	98.830	ENSPTIG00000021094	-	100	98.830	Panthera_tigris_altaica
ENSCPOG00000021069	-	100	100.000	ENSPTRG00000002306	PRPF18	100	100.000	Pan_troglodytes
ENSCPOG00000021069	-	100	99.708	ENSPANG00000023346	-	100	99.708	Papio_anubis
ENSCPOG00000021069	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.906	Paramormyrops_kingsleyae
ENSCPOG00000021069	-	100	92.982	ENSPSIG00000016064	-	100	92.982	Pelodiscus_sinensis
ENSCPOG00000021069	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSCPOG00000021069	-	100	99.708	ENSPEMG00000013704	Prpf18	100	99.708	Peromyscus_maniculatus_bairdii
ENSCPOG00000021069	-	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSCPOG00000021069	-	93	96.308	ENSPCIG00000012963	-	99	96.835	Phascolarctos_cinereus
ENSCPOG00000021069	-	100	82.051	ENSPFOG00000017611	prpf18	100	82.051	Poecilia_formosa
ENSCPOG00000021069	-	100	83.626	ENSPLAG00000000369	prpf18	100	83.626	Poecilia_latipinna
ENSCPOG00000021069	-	100	83.626	ENSPMEG00000005183	prpf18	100	83.626	Poecilia_mexicana
ENSCPOG00000021069	-	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSCPOG00000021069	-	100	99.708	ENSPPYG00000002101	PRPF18	100	99.708	Pongo_abelii
ENSCPOG00000021069	-	100	80.994	ENSPCAG00000010833	-	100	80.994	Procavia_capensis
ENSCPOG00000021069	-	100	92.398	ENSPCOG00000013057	-	100	92.398	Propithecus_coquereli
ENSCPOG00000021069	-	100	61.404	ENSPVAG00000002947	-	100	61.404	Pteropus_vampyrus
ENSCPOG00000021069	-	100	85.088	ENSPNYG00000003554	prpf18	100	85.088	Pundamilia_nyererei
ENSCPOG00000021069	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSCPOG00000021069	-	100	98.830	ENSRNOG00000018396	Prpf18	100	98.830	Rattus_norvegicus
ENSCPOG00000021069	-	100	99.415	ENSRBIG00000028028	-	100	99.415	Rhinopithecus_bieti
ENSCPOG00000021069	-	100	99.708	ENSRROG00000040695	-	100	99.708	Rhinopithecus_roxellana
ENSCPOG00000021069	-	100	99.415	ENSSBOG00000034482	-	100	99.415	Saimiri_boliviensis_boliviensis
ENSCPOG00000021069	-	100	77.485	ENSSHAG00000009669	-	100	77.485	Sarcophilus_harrisii
ENSCPOG00000021069	-	100	96.784	ENSSHAG00000016463	-	100	96.784	Sarcophilus_harrisii
ENSCPOG00000021069	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCPOG00000021069	-	98	82.609	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSCPOG00000021069	-	100	83.333	ENSSMAG00000005308	prpf18	100	83.333	Scophthalmus_maximus
ENSCPOG00000021069	-	100	85.380	ENSSDUG00000015428	prpf18	100	85.380	Seriola_dumerili
ENSCPOG00000021069	-	100	85.380	ENSSLDG00000023989	prpf18	100	85.380	Seriola_lalandi_dorsalis
ENSCPOG00000021069	-	100	69.006	ENSSARG00000005307	-	100	69.006	Sorex_araneus
ENSCPOG00000021069	-	100	92.690	ENSSPUG00000002619	-	100	92.690	Sphenodon_punctatus
ENSCPOG00000021069	-	100	84.795	ENSSPAG00000019502	prpf18	100	84.795	Stegastes_partitus
ENSCPOG00000021069	-	100	99.415	ENSSSCG00000026354	-	100	99.415	Sus_scrofa
ENSCPOG00000021069	-	100	92.398	ENSTGUG00000002286	-	100	92.398	Taeniopygia_guttata
ENSCPOG00000021069	-	100	82.456	ENSTRUG00000011278	prpf18	100	82.456	Takifugu_rubripes
ENSCPOG00000021069	-	100	82.164	ENSTNIG00000000911	prpf18	100	82.164	Tetraodon_nigroviridis
ENSCPOG00000021069	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCPOG00000021069	-	100	99.708	ENSTTRG00000011117	PRPF18	100	99.708	Tursiops_truncatus
ENSCPOG00000021069	-	95	96.308	ENSUAMG00000001815	-	94	96.308	Ursus_americanus
ENSCPOG00000021069	-	100	94.444	ENSUMAG00000012329	-	100	94.444	Ursus_maritimus
ENSCPOG00000021069	-	100	93.860	ENSVPAG00000011486	-	100	93.860	Vicugna_pacos
ENSCPOG00000021069	-	100	99.415	ENSVVUG00000005453	-	100	99.415	Vulpes_vulpes
ENSCPOG00000021069	-	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSCPOG00000021069	-	100	82.849	ENSXCOG00000020414	prpf18	100	82.849	Xiphophorus_couchianus
ENSCPOG00000021069	-	100	83.333	ENSXMAG00000004713	prpf18	91	83.333	Xiphophorus_maculatus