EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000021703 (Gene tree)
Gene ID
100726916
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
21593 bases
Position
chrDS562931.1:4008641-4030233
Accession
100726916
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000016934Fox-1_CPF12414.81.1e-4311
ENSCPOP00000028905Fox-1_CPF12414.81.2e-4311
ENSCPOP00000033084Fox-1_CPF12414.81.4e-4311
ENSCPOP00000033084RRM_1PF00076.229.6e-1911
ENSCPOP00000028905RRM_1PF00076.221e-1811
ENSCPOP00000016934RRM_1PF00076.228e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000032410RBFOX3-2012226XM_013147128ENSCPOP00000033084362 (aa)XP_013002582A0A286Y5H6
ENSCPOT00000031622RBFOX3-2032549XM_005001420ENSCPOP00000028905376 (aa)XP_005001477A0A286XUA5
ENSCPOT00000024469RBFOX3-202996-ENSCPOP00000016934331 (aa)-H0W1U4
Gene Model
Click here to download ENSCPOG00000021703's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000021703's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000021703RBFOX39656.079ENSCPOG00000022180RBFOX29254.591
ENSCPOG00000021703RBFOX310061.637ENSCPOG00000011314RBFOX19358.173
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000021703RBFOX310096.979ENSG00000167281RBFOX310097.792Homo_sapiens
ENSCPOG00000021703RBFOX310071.958ENSAPOG00000021630rbfox3b8270.330Acanthochromis_polyacanthus
ENSCPOG00000021703RBFOX38082.000ENSAPOG00000015658-8958.449Acanthochromis_polyacanthus
ENSCPOG00000021703RBFOX39877.898ENSAMEG00000014170RBFOX39373.608Ailuropoda_melanoleuca
ENSCPOG00000021703RBFOX37172.563ENSACIG00000003768-8359.829Amphilophus_citrinellus
ENSCPOG00000021703RBFOX38381.423ENSACIG00000010817rbfox3b9565.537Amphilophus_citrinellus
ENSCPOG00000021703RBFOX38082.000ENSAOCG00000010786-8065.254Amphiprion_ocellaris
ENSCPOG00000021703RBFOX310071.154ENSAOCG00000012358rbfox3b8169.429Amphiprion_ocellaris
ENSCPOG00000021703RBFOX37793.750ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSCPOG00000021703RBFOX38082.000ENSAPEG00000015891-7961.126Amphiprion_percula
ENSCPOG00000021703RBFOX39666.571ENSATEG00000023101-9365.819Anabas_testudineus
ENSCPOG00000021703RBFOX310071.781ENSATEG00000019945rbfox3b9670.621Anabas_testudineus
ENSCPOG00000021703RBFOX310077.198ENSACAG00000016093RBFOX38377.650Anolis_carolinensis
ENSCPOG00000021703RBFOX310096.073ENSANAG00000023457RBFOX39196.073Aotus_nancymaae
ENSCPOG00000021703RBFOX310071.429ENSACLG00000020011rbfox3b9569.143Astatotilapia_calliptera
ENSCPOG00000021703RBFOX310069.589ENSACLG00000025552-8168.857Astatotilapia_calliptera
ENSCPOG00000021703RBFOX310066.575ENSAMXG00000042841rbfox3b8565.429Astyanax_mexicanus
ENSCPOG00000021703RBFOX39670.455ENSAMXG00000037246rbfox3a9070.739Astyanax_mexicanus
ENSCPOG00000021703RBFOX310095.166ENSBTAG00000006280RBFOX310095.166Bos_taurus
ENSCPOG00000021703RBFOX310096.133ENSCJAG00000009563RBFOX310096.133Callithrix_jacchus
ENSCPOG00000021703RBFOX38081.250ENSCAFG00000005547RBFOX310075.380Canis_familiaris
ENSCPOG00000021703RBFOX310096.809ENSCAFG00020008126RBFOX310096.809Canis_lupus_dingo
ENSCPOG00000021703RBFOX39894.278ENSCHIG00000009124RBFOX39895.368Capra_hircus
ENSCPOG00000021703RBFOX310097.885ENSTSYG00000029617RBFOX310097.885Carlito_syrichta
ENSCPOG00000021703RBFOX310096.073ENSCCAG00000028450RBFOX310096.073Cebus_capucinus
ENSCPOG00000021703RBFOX39791.304ENSCATG00000018349RBFOX310084.254Cercocebus_atys
ENSCPOG00000021703RBFOX310098.936ENSCLAG00000006449RBFOX310098.936Chinchilla_lanigera
ENSCPOG00000021703RBFOX310084.530ENSCSAG00000002355RBFOX310084.530Chlorocebus_sabaeus
ENSCPOG00000021703RBFOX39677.285ENSCPBG00000010904RBFOX39577.810Chrysemys_picta_bellii
ENSCPOG00000021703RBFOX310097.606ENSCANG00000043120RBFOX310097.606Colobus_angolensis_palliatus
ENSCPOG00000021703RBFOX310096.011ENSCGRG00001019476Rbfox310096.011Cricetulus_griseus_chok1gshd
ENSCPOG00000021703RBFOX310096.011ENSCGRG00000003268Rbfox310096.011Cricetulus_griseus_crigri
ENSCPOG00000021703RBFOX310057.493ENSCSEG00000020606RBFOX38359.226Cynoglossus_semilaevis
ENSCPOG00000021703RBFOX38482.000ENSCSEG00000015567RBFOX38963.613Cynoglossus_semilaevis
ENSCPOG00000021703RBFOX310071.154ENSCVAG00000006882rbfox3b8169.429Cyprinodon_variegatus
ENSCPOG00000021703RBFOX310063.444ENSDARG00000074310rbfox3b9669.421Danio_rerio
ENSCPOG00000021703RBFOX39670.170ENSDARG00000010083rbfox3a9169.886Danio_rerio
ENSCPOG00000021703RBFOX38585.390ENSDNOG00000039391RBFOX39478.652Dasypus_novemcinctus
ENSCPOG00000021703RBFOX39684.765ENSDORG00000005352Rbfox39684.765Dipodomys_ordii
ENSCPOG00000021703RBFOX38652.174ENSEBUG00000013559RBFOX37151.815Eptatretus_burgeri
ENSCPOG00000021703RBFOX310064.781ENSEBUG00000002129RBFOX39263.636Eptatretus_burgeri
ENSCPOG00000021703RBFOX310084.530ENSEASG00005005059RBFOX310084.530Equus_asinus_asinus
ENSCPOG00000021703RBFOX310084.807ENSECAG00000023811RBFOX310084.807Equus_caballus
ENSCPOG00000021703RBFOX39881.471ENSEEUG00000013974RBFOX39882.016Erinaceus_europaeus
ENSCPOG00000021703RBFOX310070.976ENSELUG00000017963rbfox3b9565.831Esox_lucius
ENSCPOG00000021703RBFOX35263.158ENSELUG00000009807-5067.059Esox_lucius
ENSCPOG00000021703RBFOX310093.656ENSFCAG00000002555RBFOX310093.656Felis_catus
ENSCPOG00000021703RBFOX39669.832ENSFALG00000012288RBFOX39262.143Ficedula_albicollis
ENSCPOG00000021703RBFOX310093.883ENSFDAG00000007489RBFOX310093.883Fukomys_damarensis
ENSCPOG00000021703RBFOX310068.769ENSFHEG00000008550rbfox3b9566.771Fundulus_heteroclitus
ENSCPOG00000021703RBFOX310063.158ENSGMOG00000019304-9968.468Gadus_morhua
ENSCPOG00000021703RBFOX39678.963ENSGALG00000032889RBFOX38380.115Gallus_gallus
ENSCPOG00000021703RBFOX39869.101ENSGAFG00000005025rbfox3b8668.571Gambusia_affinis
ENSCPOG00000021703RBFOX39672.131ENSGACG00000002138-9672.678Gasterosteus_aculeatus
ENSCPOG00000021703RBFOX39677.285ENSGAGG00000020025RBFOX39577.810Gopherus_agassizii
ENSCPOG00000021703RBFOX310097.340ENSGGOG00000012546RBFOX310097.340Gorilla_gorilla
ENSCPOG00000021703RBFOX310071.429ENSHBUG00000018099rbfox3b8270.055Haplochromis_burtoni
ENSCPOG00000021703RBFOX310069.921ENSHBUG00000023098-9069.231Haplochromis_burtoni
ENSCPOG00000021703RBFOX310097.619ENSHGLG00000008679RBFOX310097.619Heterocephalus_glaber_female
ENSCPOG00000021703RBFOX39893.225ENSHGLG00100014739RBFOX39893.225Heterocephalus_glaber_male
ENSCPOG00000021703RBFOX37880.435ENSHCOG00000001863RBFOX38584.783Hippocampus_comes
ENSCPOG00000021703RBFOX39665.616ENSHCOG00000007444RBFOX37864.045Hippocampus_comes
ENSCPOG00000021703RBFOX39671.038ENSIPUG00000012010rbfox3a7388.462Ictalurus_punctatus
ENSCPOG00000021703RBFOX310064.088ENSIPUG00000021966rbfox3b8475.221Ictalurus_punctatus
ENSCPOG00000021703RBFOX39895.628ENSSTOG00000026817RBFOX310095.575Ictidomys_tridecemlineatus
ENSCPOG00000021703RBFOX310097.074ENSJJAG00000014167Rbfox310097.074Jaculus_jaculus
ENSCPOG00000021703RBFOX310071.154ENSKMAG00000006726rbfox3b8763.517Kryptolebias_marmoratus
ENSCPOG00000021703RBFOX39670.571ENSLBEG00000022508-8169.714Labrus_bergylta
ENSCPOG00000021703RBFOX310071.693ENSLBEG00000004030rbfox3b9564.972Labrus_bergylta
ENSCPOG00000021703RBFOX39670.035ENSLACG00000018409-9364.251Latimeria_chalumnae
ENSCPOG00000021703RBFOX39674.000ENSLOCG00000012267rbfox3a9073.714Lepisosteus_oculatus
ENSCPOG00000021703RBFOX310095.304ENSLAFG00000016623RBFOX39895.095Loxodonta_africana
ENSCPOG00000021703RBFOX310096.961ENSMFAG00000002247RBFOX310096.961Macaca_fascicularis
ENSCPOG00000021703RBFOX310096.979ENSMMUG00000023028RBFOX310096.979Macaca_mulatta
ENSCPOG00000021703RBFOX310092.021ENSMNEG00000041147RBFOX310092.021Macaca_nemestrina
ENSCPOG00000021703RBFOX39791.304ENSMLEG00000025686RBFOX310084.254Mandrillus_leucophaeus
ENSCPOG00000021703RBFOX39665.714ENSMAMG00000020600-9265.147Mastacembelus_armatus
ENSCPOG00000021703RBFOX38380.876ENSMAMG00000019810rbfox3b9564.957Mastacembelus_armatus
ENSCPOG00000021703RBFOX36664.815ENSMZEG00005003055-5488.800Maylandia_zebra
ENSCPOG00000021703RBFOX310071.429ENSMZEG00005000781rbfox3b8270.055Maylandia_zebra
ENSCPOG00000021703RBFOX35391.146ENSMGAG00000005600RBFOX37391.146Meleagris_gallopavo
ENSCPOG00000021703RBFOX39695.028ENSMAUG00000013543Rbfox39695.028Mesocricetus_auratus
ENSCPOG00000021703RBFOX310096.011ENSMICG00000014898RBFOX310096.011Microcebus_murinus
ENSCPOG00000021703RBFOX39894.278ENSMOCG00000015373Rbfox39895.368Microtus_ochrogaster
ENSCPOG00000021703RBFOX310069.106ENSMMOG00000020193rbfox3b9161.832Mola_mola
ENSCPOG00000021703RBFOX39679.251ENSMODG00000002089RBFOX38380.403Monodelphis_domestica
ENSCPOG00000021703RBFOX310070.330ENSMALG00000020407rbfox3b8168.571Monopterus_albus
ENSCPOG00000021703RBFOX310071.504ENSMALG00000018270-9265.352Monopterus_albus
ENSCPOG00000021703RBFOX310096.011MGP_CAROLIEiJ_G0017487Rbfox310097.241Mus_caroli
ENSCPOG00000021703RBFOX39895.095ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSCPOG00000021703RBFOX310096.809MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSCPOG00000021703RBFOX310096.277MGP_SPRETEiJ_G0018331Rbfox310097.241Mus_spretus
ENSCPOG00000021703RBFOX39875.248ENSMPUG00000012319RBFOX39276.238Mustela_putorius_furo
ENSCPOG00000021703RBFOX310096.277ENSNGAG00000018006Rbfox310096.277Nannospalax_galili
ENSCPOG00000021703RBFOX37893.333ENSNBRG00000022885-7893.333Neolamprologus_brichardi
ENSCPOG00000021703RBFOX310069.505ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSCPOG00000021703RBFOX361100.000ENSNLEG00000000153-82100.000Nomascus_leucogenys
ENSCPOG00000021703RBFOX39665.706ENSMEUG00000004218-9665.994Notamacropus_eugenii
ENSCPOG00000021703RBFOX36896.629ENSOPRG00000016279-7596.629Ochotona_princeps
ENSCPOG00000021703RBFOX310098.936ENSODEG00000009433RBFOX310098.936Octodon_degus
ENSCPOG00000021703RBFOX310070.137ENSONIG00000007282-8769.429Oreochromis_niloticus
ENSCPOG00000021703RBFOX310076.903ENSONIG00000009549rbfox3b9676.230Oreochromis_niloticus
ENSCPOG00000021703RBFOX38080.208ENSOCUG00000014217RBFOX38279.276Oryctolagus_cuniculus
ENSCPOG00000021703RBFOX310071.768ENSORLG00000000905rbfox3b6767.368Oryzias_latipes
ENSCPOG00000021703RBFOX310071.768ENSORLG00020018030rbfox3b8966.458Oryzias_latipes_hni
ENSCPOG00000021703RBFOX310070.685ENSORLG00015009200rbfox3b9178.000Oryzias_latipes_hsok
ENSCPOG00000021703RBFOX36675.969ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSCPOG00000021703RBFOX310083.978ENSOGAG00000029595RBFOX39479.052Otolemur_garnettii
ENSCPOG00000021703RBFOX36986.441ENSOARG00000002908RBFOX39256.927Ovis_aries
ENSCPOG00000021703RBFOX39396.726ENSPPAG00000025383RBFOX39496.726Pan_paniscus
ENSCPOG00000021703RBFOX310093.646ENSPPRG00000007819RBFOX310093.646Panthera_pardus
ENSCPOG00000021703RBFOX310097.340ENSPTRG00000009727RBFOX310097.340Pan_troglodytes
ENSCPOG00000021703RBFOX39791.304ENSPANG00000019837RBFOX310084.254Papio_anubis
ENSCPOG00000021703RBFOX39673.626ENSPKIG00000010299rbfox3a8565.879Paramormyrops_kingsleyae
ENSCPOG00000021703RBFOX310058.947ENSPKIG00000022633-8557.735Paramormyrops_kingsleyae
ENSCPOG00000021703RBFOX38669.524ENSPMGG00000008000rbfox3b7768.333Periophthalmus_magnuspinnatus
ENSCPOG00000021703RBFOX310095.745ENSPEMG00000010500Rbfox310095.745Peromyscus_maniculatus_bairdii
ENSCPOG00000021703RBFOX36464.542ENSPMAG00000008689rbfox3b9962.948Petromyzon_marinus
ENSCPOG00000021703RBFOX39693.372ENSPCIG00000005766RBFOX39693.660Phascolarctos_cinereus
ENSCPOG00000021703RBFOX310071.958ENSPFOG00000018294rbfox3b9270.186Poecilia_formosa
ENSCPOG00000021703RBFOX36585.792ENSPLAG00000000481rbfox3b7967.208Poecilia_latipinna
ENSCPOG00000021703RBFOX310068.769ENSPMEG00000022997rbfox3b9566.771Poecilia_mexicana
ENSCPOG00000021703RBFOX310071.507ENSPREG00000012886rbfox3b8669.714Poecilia_reticulata
ENSCPOG00000021703RBFOX39871.935ENSPPYG00000008704RBFOX39372.752Pongo_abelii
ENSCPOG00000021703RBFOX39691.066ENSPCAG00000001401RBFOX39692.219Procavia_capensis
ENSCPOG00000021703RBFOX310096.409ENSPCOG00000012689RBFOX310096.133Propithecus_coquereli
ENSCPOG00000021703RBFOX39687.320ENSPVAG00000015243RBFOX39687.608Pteropus_vampyrus
ENSCPOG00000021703RBFOX37893.333ENSPNYG00000009079-7493.333Pundamilia_nyererei
ENSCPOG00000021703RBFOX37392.593ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSCPOG00000021703RBFOX38380.000ENSPNAG00000018173rbfox3b8560.759Pygocentrus_nattereri
ENSCPOG00000021703RBFOX39671.038ENSPNAG00000002889rbfox3a9363.665Pygocentrus_nattereri
ENSCPOG00000021703RBFOX310096.809ENSRNOG00000003386Rbfox310096.809Rattus_norvegicus
ENSCPOG00000021703RBFOX39791.615ENSRBIG00000040449RBFOX38591.304Rhinopithecus_bieti
ENSCPOG00000021703RBFOX39791.615ENSRROG00000000766RBFOX310084.530Rhinopithecus_roxellana
ENSCPOG00000021703RBFOX310096.543ENSSBOG00000031591RBFOX310096.543Saimiri_boliviensis_boliviensis
ENSCPOG00000021703RBFOX39578.165ENSSHAG00000016076RBFOX39578.481Sarcophilus_harrisii
ENSCPOG00000021703RBFOX39673.626ENSSFOG00015023260rbfox3a8970.219Scleropages_formosus
ENSCPOG00000021703RBFOX39658.000ENSSFOG00015004716RBFOX38955.660Scleropages_formosus
ENSCPOG00000021703RBFOX310068.608ENSSMAG00000012618rbfox3b7166.667Scophthalmus_maximus
ENSCPOG00000021703RBFOX310067.213ENSSMAG00000019052-9566.571Scophthalmus_maximus
ENSCPOG00000021703RBFOX39664.553ENSSDUG00000015801-8178.571Seriola_dumerili
ENSCPOG00000021703RBFOX310068.769ENSSDUG00000023183rbfox3b9566.771Seriola_dumerili
ENSCPOG00000021703RBFOX39666.286ENSSLDG00000016098-9065.416Seriola_lalandi_dorsalis
ENSCPOG00000021703RBFOX310071.154ENSSLDG00000000149rbfox3b8169.429Seriola_lalandi_dorsalis
ENSCPOG00000021703RBFOX39677.077ENSSPUG00000011733RBFOX39578.223Sphenodon_punctatus
ENSCPOG00000021703RBFOX38378.000ENSSPAG00000017571rbfox3b8061.017Stegastes_partitus
ENSCPOG00000021703RBFOX38862.848ENSSPAG00000004898-7862.058Stegastes_partitus
ENSCPOG00000021703RBFOX38894.880ENSSSCG00000039498RBFOX310096.084Sus_scrofa
ENSCPOG00000021703RBFOX310068.435ENSTRUG00000004894rbfox3b9066.125Takifugu_rubripes
ENSCPOG00000021703RBFOX310063.980ENSTNIG00000011278rbfox3b9259.953Tetraodon_nigroviridis
ENSCPOG00000021703RBFOX39268.955ENSTBEG00000004296-9663.435Tupaia_belangeri
ENSCPOG00000021703RBFOX39688.761ENSTTRG00000003676RBFOX39689.914Tursiops_truncatus
ENSCPOG00000021703RBFOX39881.870ENSUAMG00000004668RBFOX39782.153Ursus_americanus
ENSCPOG00000021703RBFOX310096.685ENSVVUG00000017864RBFOX38996.685Vulpes_vulpes
ENSCPOG00000021703RBFOX310062.534ENSXETG00000020236rbfox39159.335Xenopus_tropicalis
ENSCPOG00000021703RBFOX310069.863ENSXCOG00000018262rbfox3b9564.571Xiphophorus_couchianus
ENSCPOG00000021703RBFOX310071.958ENSXMAG00000012939rbfox3b9163.881Xiphophorus_maculatus

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