EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000021834 (Gene tree)
Gene ID: 100735847
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 15506 bases
Position: chrDS562870.1:41712050-41727555
Accession: 100735847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000019702	tRNA-synt_1g	PF09334.11	2.9e-13	1	1
ENSCPOP00000025285	tRNA-synt_1g	PF09334.11	3.1e-13	1	1
ENSCPOP00000019702	Anticodon_1	PF08264.13	6.1e-28	1	1
ENSCPOP00000025285	Anticodon_1	PF08264.13	6.2e-28	1	1
ENSCPOP00000019702	tRNA-synt_1	PF00133.22	1.3e-178	1	1
ENSCPOP00000025285	tRNA-synt_1	PF00133.22	1.4e-178	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000026608	VARS2-202	6075	XM_013156744	ENSCPOP00000019702	1065 (aa)	XP_013012198	H0W9P2
ENSCPOT00000046770	VARS2-201	6412	XM_005005492	ENSCPOP00000025285	1081 (aa)	XP_005005549	A0A286XII8

Gene Model

Click here to download ENSCPOG00000021834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000021834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000021834	VARS2	95	51.949	ENSCPOG00000000870	VARS	81	51.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000021834	VARS2	92	51.434	ENSAPOG00000007396	vars2	97	49.813	Acanthochromis_polyacanthus
ENSCPOG00000021834	VARS2	99	83.067	ENSAMEG00000012997	VARS2	98	82.881	Ailuropoda_melanoleuca
ENSCPOG00000021834	VARS2	97	51.174	ENSACIG00000004344	vars2	99	51.080	Amphilophus_citrinellus
ENSCPOG00000021834	VARS2	92	51.434	ENSAOCG00000000476	vars2	97	49.674	Amphiprion_ocellaris
ENSCPOG00000021834	VARS2	92	51.386	ENSAPEG00000008646	vars2	95	49.627	Amphiprion_percula
ENSCPOG00000021834	VARS2	92	52.600	ENSATEG00000012291	vars2	97	51.147	Anabas_testudineus
ENSCPOG00000021834	VARS2	96	58.285	ENSACAG00000022093	VARS2	95	58.092	Anolis_carolinensis
ENSCPOG00000021834	VARS2	99	84.290	ENSANAG00000038018	VARS2	99	84.290	Aotus_nancymaae
ENSCPOG00000021834	VARS2	98	51.117	ENSACLG00000018673	vars2	99	51.117	Astatotilapia_calliptera
ENSCPOG00000021834	VARS2	95	52.431	ENSAMXG00000017773	vars2	96	52.264	Astyanax_mexicanus
ENSCPOG00000021834	VARS2	99	84.674	ENSBTAG00000010698	VARS2	99	84.478	Bos_taurus
ENSCPOG00000021834	VARS2	99	83.631	ENSCJAG00000019826	VARS2	99	83.631	Callithrix_jacchus
ENSCPOG00000021834	VARS2	99	80.697	ENSCAFG00000000454	VARS2	99	80.697	Canis_familiaris
ENSCPOG00000021834	VARS2	87	81.701	ENSCAFG00020019387	VARS2	95	81.750	Canis_lupus_dingo
ENSCPOG00000021834	VARS2	99	84.499	ENSCHIG00000007847	VARS2	99	84.492	Capra_hircus
ENSCPOG00000021834	VARS2	99	83.349	ENSTSYG00000009904	VARS2	99	83.349	Carlito_syrichta
ENSCPOG00000021834	VARS2	88	99.143	ENSCAPG00000017770	VARS2	100	99.143	Cavia_aperea
ENSCPOG00000021834	VARS2	99	84.255	ENSCCAG00000037907	VARS2	99	84.196	Cebus_capucinus
ENSCPOG00000021834	VARS2	99	84.760	ENSCATG00000032554	VARS2	99	84.760	Cercocebus_atys
ENSCPOG00000021834	VARS2	100	89.014	ENSCLAG00000002889	VARS2	100	89.014	Chinchilla_lanigera
ENSCPOG00000021834	VARS2	99	84.478	ENSCSAG00000008327	VARS2	99	84.478	Chlorocebus_sabaeus
ENSCPOG00000021834	VARS2	89	63.180	ENSCPBG00000021502	VARS2	95	62.866	Chrysemys_picta_bellii
ENSCPOG00000021834	VARS2	99	84.536	ENSCANG00000014991	VARS2	99	84.536	Colobus_angolensis_palliatus
ENSCPOG00000021834	VARS2	98	80.633	ENSCGRG00001021535	Vars2	99	80.283	Cricetulus_griseus_chok1gshd
ENSCPOG00000021834	VARS2	98	80.633	ENSCGRG00000014112	Vars2	99	80.283	Cricetulus_griseus_crigri
ENSCPOG00000021834	VARS2	82	56.818	ENSCSEG00000015432	vars2	88	67.333	Cynoglossus_semilaevis
ENSCPOG00000021834	VARS2	63	53.019	ENSCVAG00000017765	vars2	94	52.872	Cyprinodon_variegatus
ENSCPOG00000021834	VARS2	96	51.678	ENSDARG00000056717	vars2	97	51.582	Danio_rerio
ENSCPOG00000021834	VARS2	78	83.532	ENSDORG00000008516	Vars2	93	83.532	Dipodomys_ordii
ENSCPOG00000021834	VARS2	99	73.684	ENSETEG00000014844	VARS2	99	73.684	Echinops_telfairi
ENSCPOG00000021834	VARS2	99	84.369	ENSEASG00005019997	VARS2	98	84.206	Equus_asinus_asinus
ENSCPOG00000021834	VARS2	99	85.122	ENSECAG00000018202	VARS2	99	85.122	Equus_caballus
ENSCPOG00000021834	VARS2	62	78.641	ENSEEUG00000012591	-	63	78.641	Erinaceus_europaeus
ENSCPOG00000021834	VARS2	92	52.657	ENSELUG00000017824	vars2	96	51.268	Esox_lucius
ENSCPOG00000021834	VARS2	99	82.015	ENSFCAG00000010531	VARS2	99	82.015	Felis_catus
ENSCPOG00000021834	VARS2	99	87.453	ENSFDAG00000017216	VARS2	99	87.453	Fukomys_damarensis
ENSCPOG00000021834	VARS2	84	52.567	ENSFHEG00000013932	vars2	91	51.557	Fundulus_heteroclitus
ENSCPOG00000021834	VARS2	88	54.727	ENSGMOG00000018960	vars2	99	54.727	Gadus_morhua
ENSCPOG00000021834	VARS2	80	50.253	ENSGAFG00000004737	vars2	88	50.127	Gambusia_affinis
ENSCPOG00000021834	VARS2	87	55.165	ENSGACG00000001464	vars2	99	53.753	Gasterosteus_aculeatus
ENSCPOG00000021834	VARS2	91	61.837	ENSGAGG00000011652	VARS2	99	61.735	Gopherus_agassizii
ENSCPOG00000021834	VARS2	99	83.631	ENSGGOG00000014587	VARS2	99	83.631	Gorilla_gorilla
ENSCPOG00000021834	VARS2	90	52.381	ENSHBUG00000002448	vars2	95	52.280	Haplochromis_burtoni
ENSCPOG00000021834	VARS2	100	85.915	ENSHGLG00000012886	VARS2	97	85.343	Heterocephalus_glaber_female
ENSCPOG00000021834	VARS2	100	85.822	ENSHGLG00100016535	VARS2	100	85.822	Heterocephalus_glaber_male
ENSCPOG00000021834	VARS2	68	48.928	ENSHCOG00000017907	vars2	94	50.776	Hippocampus_comes
ENSCPOG00000021834	VARS2	92	54.229	ENSIPUG00000015573	Vars2	98	52.190	Ictalurus_punctatus
ENSCPOG00000021834	VARS2	99	85.028	ENSSTOG00000009924	VARS2	99	85.028	Ictidomys_tridecemlineatus
ENSCPOG00000021834	VARS2	99	81.981	ENSJJAG00000011144	Vars2	99	81.981	Jaculus_jaculus
ENSCPOG00000021834	VARS2	93	51.654	ENSKMAG00000001393	vars2	96	51.426	Kryptolebias_marmoratus
ENSCPOG00000021834	VARS2	95	50.862	ENSLBEG00000011949	vars2	98	50.280	Labrus_bergylta
ENSCPOG00000021834	VARS2	52	63.423	ENSLBEG00000005480	-	81	62.883	Labrus_bergylta
ENSCPOG00000021834	VARS2	95	52.174	ENSLACG00000001576	-	99	52.077	Latimeria_chalumnae
ENSCPOG00000021834	VARS2	99	82.059	ENSLAFG00000015183	VARS2	99	82.059	Loxodonta_africana
ENSCPOG00000021834	VARS2	99	83.819	ENSMFAG00000042367	VARS2	99	83.819	Macaca_fascicularis
ENSCPOG00000021834	VARS2	99	83.819	ENSMMUG00000018609	VARS2	99	83.819	Macaca_mulatta
ENSCPOG00000021834	VARS2	99	83.913	ENSMNEG00000043163	VARS2	99	83.913	Macaca_nemestrina
ENSCPOG00000021834	VARS2	99	84.817	ENSMLEG00000041728	VARS2	97	84.817	Mandrillus_leucophaeus
ENSCPOG00000021834	VARS2	95	50.336	ENSMAMG00000020339	vars2	98	49.719	Mastacembelus_armatus
ENSCPOG00000021834	VARS2	98	51.024	ENSMZEG00005017669	vars2	99	51.024	Maylandia_zebra
ENSCPOG00000021834	VARS2	99	80.961	ENSMAUG00000018946	Vars2	99	80.961	Mesocricetus_auratus
ENSCPOG00000021834	VARS2	84	86.034	ENSMICG00000005365	VARS2	100	86.034	Microcebus_murinus
ENSCPOG00000021834	VARS2	94	82.656	ENSMOCG00000014607	Vars2	99	82.656	Microtus_ochrogaster
ENSCPOG00000021834	VARS2	92	51.759	ENSMMOG00000012122	vars2	98	50.000	Mola_mola
ENSCPOG00000021834	VARS2	99	72.932	ENSMODG00000015848	VARS2	99	72.932	Monodelphis_domestica
ENSCPOG00000021834	VARS2	89	54.062	ENSMALG00000009217	vars2	99	50.464	Monopterus_albus
ENSCPOG00000021834	VARS2	99	81.887	MGP_CAROLIEiJ_G0021529	Vars2	99	81.887	Mus_caroli
ENSCPOG00000021834	VARS2	99	81.698	ENSMUSG00000038838	Vars2	99	81.698	Mus_musculus
ENSCPOG00000021834	VARS2	99	82.170	MGP_PahariEiJ_G0020523	Vars2	99	82.170	Mus_pahari
ENSCPOG00000021834	VARS2	99	81.887	MGP_SPRETEiJ_G0022436	Vars2	99	81.887	Mus_spretus
ENSCPOG00000021834	VARS2	99	82.408	ENSMPUG00000011643	VARS2	99	82.408	Mustela_putorius_furo
ENSCPOG00000021834	VARS2	99	81.530	ENSMLUG00000002356	VARS2	97	81.530	Myotis_lucifugus
ENSCPOG00000021834	VARS2	98	75.859	ENSNGAG00000020607	Vars2	99	75.258	Nannospalax_galili
ENSCPOG00000021834	VARS2	60	51.657	ENSNBRG00000001624	vars2	58	51.657	Neolamprologus_brichardi
ENSCPOG00000021834	VARS2	99	80.506	ENSNLEG00000005625	VARS2	97	80.506	Nomascus_leucogenys
ENSCPOG00000021834	VARS2	78	70.715	ENSMEUG00000014475	VARS2	90	70.715	Notamacropus_eugenii
ENSCPOG00000021834	VARS2	90	82.096	ENSOPRG00000000682	VARS2	90	82.096	Ochotona_princeps
ENSCPOG00000021834	VARS2	99	87.853	ENSODEG00000017965	VARS2	99	87.853	Octodon_degus
ENSCPOG00000021834	VARS2	92	38.387	ENSONIG00000004734	vars2	99	38.290	Oreochromis_niloticus
ENSCPOG00000021834	VARS2	75	87.879	ENSOANG00000000398	-	98	87.879	Ornithorhynchus_anatinus
ENSCPOG00000021834	VARS2	99	78.962	ENSOCUG00000021496	VARS2	64	79.055	Oryctolagus_cuniculus
ENSCPOG00000021834	VARS2	92	51.921	ENSORLG00000010632	vars2	97	50.470	Oryzias_latipes
ENSCPOG00000021834	VARS2	92	51.724	ENSORLG00020018584	vars2	99	49.816	Oryzias_latipes_hni
ENSCPOG00000021834	VARS2	92	51.724	ENSORLG00015010408	vars2	99	49.816	Oryzias_latipes_hsok
ENSCPOG00000021834	VARS2	93	52.353	ENSOMEG00000008360	vars2	97	50.936	Oryzias_melastigma
ENSCPOG00000021834	VARS2	99	83.099	ENSOGAG00000006087	VARS2	97	83.099	Otolemur_garnettii
ENSCPOG00000021834	VARS2	99	83.853	ENSOARG00000010844	VARS2	99	83.723	Ovis_aries
ENSCPOG00000021834	VARS2	99	83.631	ENSPPAG00000041141	VARS2	99	83.631	Pan_paniscus
ENSCPOG00000021834	VARS2	99	81.544	ENSPPRG00000006751	VARS2	98	81.520	Panthera_pardus
ENSCPOG00000021834	VARS2	99	81.544	ENSPTIG00000017799	VARS2	98	82.863	Panthera_tigris_altaica
ENSCPOG00000021834	VARS2	99	83.631	ENSPTRG00000034497	VARS2	99	83.631	Pan_troglodytes
ENSCPOG00000021834	VARS2	99	84.724	ENSPANG00000018481	VARS2	100	85.039	Papio_anubis
ENSCPOG00000021834	VARS2	95	54.980	ENSPKIG00000011372	vars2	99	53.782	Paramormyrops_kingsleyae
ENSCPOG00000021834	VARS2	59	67.195	ENSPSIG00000006206	VARS2	92	66.512	Pelodiscus_sinensis
ENSCPOG00000021834	VARS2	96	52.642	ENSPMGG00000000465	vars2	98	52.457	Periophthalmus_magnuspinnatus
ENSCPOG00000021834	VARS2	99	81.457	ENSPEMG00000014691	Vars2	99	81.457	Peromyscus_maniculatus_bairdii
ENSCPOG00000021834	VARS2	99	74.434	ENSPCIG00000015040	VARS2	99	74.434	Phascolarctos_cinereus
ENSCPOG00000021834	VARS2	93	52.993	ENSPFOG00000017616	vars2	97	51.589	Poecilia_formosa
ENSCPOG00000021834	VARS2	93	52.544	ENSPLAG00000019778	vars2	99	50.968	Poecilia_latipinna
ENSCPOG00000021834	VARS2	93	52.642	ENSPMEG00000011123	vars2	97	51.450	Poecilia_mexicana
ENSCPOG00000021834	VARS2	89	47.844	ENSPREG00000014998	vars2	95	46.589	Poecilia_reticulata
ENSCPOG00000021834	VARS2	99	84.008	ENSPPYG00000016424	VARS2	99	84.008	Pongo_abelii
ENSCPOG00000021834	VARS2	84	76.294	ENSPCAG00000006946	VARS2	84	76.294	Procavia_capensis
ENSCPOG00000021834	VARS2	99	83.240	ENSPCOG00000014839	VARS2	98	83.209	Propithecus_coquereli
ENSCPOG00000021834	VARS2	99	82.143	ENSPVAG00000004197	VARS2	99	82.143	Pteropus_vampyrus
ENSCPOG00000021834	VARS2	82	60.484	ENSPNYG00000010314	vars2	100	60.484	Pundamilia_nyererei
ENSCPOG00000021834	VARS2	95	53.122	ENSPNAG00000026793	vars2	96	52.642	Pygocentrus_nattereri
ENSCPOG00000021834	VARS2	99	81.226	ENSRNOG00000000833	Vars2	99	81.226	Rattus_norvegicus
ENSCPOG00000021834	VARS2	99	84.196	ENSRBIG00000032725	VARS2	99	84.196	Rhinopithecus_bieti
ENSCPOG00000021834	VARS2	99	84.290	ENSRROG00000043847	VARS2	99	84.290	Rhinopithecus_roxellana
ENSCPOG00000021834	VARS2	99	82.553	ENSSBOG00000033240	VARS2	98	82.553	Saimiri_boliviensis_boliviensis
ENSCPOG00000021834	VARS2	99	73.302	ENSSHAG00000009307	VARS2	99	73.302	Sarcophilus_harrisii
ENSCPOG00000021834	VARS2	96	51.951	ENSSFOG00015016187	vars2	98	51.169	Scleropages_formosus
ENSCPOG00000021834	VARS2	92	53.685	ENSSMAG00000020842	vars2	98	52.178	Scophthalmus_maximus
ENSCPOG00000021834	VARS2	92	52.584	ENSSDUG00000011598	vars2	98	51.313	Seriola_dumerili
ENSCPOG00000021834	VARS2	90	52.664	ENSSLDG00000015492	vars2	97	50.428	Seriola_lalandi_dorsalis
ENSCPOG00000021834	VARS2	57	86.861	ENSSARG00000003786	-	69	86.861	Sorex_araneus
ENSCPOG00000021834	VARS2	88	59.338	ENSSPUG00000014700	VARS2	94	59.232	Sphenodon_punctatus
ENSCPOG00000021834	VARS2	92	50.050	ENSSPAG00000004654	vars2	99	47.423	Stegastes_partitus
ENSCPOG00000021834	VARS2	99	84.478	ENSSSCG00000001384	VARS2	99	85.196	Sus_scrofa
ENSCPOG00000021834	VARS2	94	53.029	ENSTRUG00000005264	vars2	96	52.750	Takifugu_rubripes
ENSCPOG00000021834	VARS2	96	51.541	ENSTNIG00000005916	vars2	97	52.095	Tetraodon_nigroviridis
ENSCPOG00000021834	VARS2	51	84.848	ENSTBEG00000007976	-	53	84.848	Tupaia_belangeri
ENSCPOG00000021834	VARS2	93	84.513	ENSTTRG00000012243	VARS2	99	71.966	Tursiops_truncatus
ENSCPOG00000021834	VARS2	99	82.425	ENSUAMG00000026124	VARS2	99	83.804	Ursus_americanus
ENSCPOG00000021834	VARS2	99	82.879	ENSUMAG00000019894	VARS2	99	82.879	Ursus_maritimus
ENSCPOG00000021834	VARS2	99	81.356	ENSVVUG00000010754	VARS2	95	81.332	Vulpes_vulpes
ENSCPOG00000021834	VARS2	89	55.036	ENSXETG00000003036	vars2	99	54.933	Xenopus_tropicalis
ENSCPOG00000021834	VARS2	90	53.649	ENSXCOG00000003455	vars2	97	52.004	Xiphophorus_couchianus
ENSCPOG00000021834	VARS2	93	52.051	ENSXMAG00000013523	vars2	97	50.700	Xiphophorus_maculatus