EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000022216 (Gene tree)
Gene ID: 100714475
Gene Symbol: -
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 50547 bases
Position: chrDS562896.1:8944422-8994968
Accession: 100714475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017567	Transformer	PF06495.11	1.2e-06	1	1
ENSCPOP00000017567	RRM_1	PF00076.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000023567	-	3564	XM_013151121	ENSCPOP00000017567	1187 (aa)	XP_013006575	H0W3M0

Gene Model

Click here to download ENSCPOG00000022216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000022216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000022216	-	99	84.459	ENSCPOG00000030311	-	99	82.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000022216	-	99	87.283	ENSG00000213079	SCAF8	99	88.073	Homo_sapiens
ENSCPOG00000022216	-	87	58.111	ENSAPOG00000015527	SCAF8	76	57.022	Acanthochromis_polyacanthus
ENSCPOG00000022216	-	99	86.109	ENSAMEG00000007583	SCAF8	95	86.898	Ailuropoda_melanoleuca
ENSCPOG00000022216	-	87	58.232	ENSAOCG00000002421	SCAF8	76	57.143	Amphiprion_ocellaris
ENSCPOG00000022216	-	85	54.156	ENSAPEG00000020115	SCAF8	77	53.896	Amphiprion_percula
ENSCPOG00000022216	-	89	55.152	ENSATEG00000006959	SCAF8	96	54.005	Anabas_testudineus
ENSCPOG00000022216	-	99	71.518	ENSAPLG00000005765	SCAF8	99	72.144	Anas_platyrhynchos
ENSCPOG00000022216	-	99	66.484	ENSACAG00000005282	SCAF8	99	66.562	Anolis_carolinensis
ENSCPOG00000022216	-	99	86.572	ENSANAG00000036184	SCAF8	99	87.362	Aotus_nancymaae
ENSCPOG00000022216	-	87	58.498	ENSACLG00000018828	SCAF8	79	50.545	Astatotilapia_calliptera
ENSCPOG00000022216	-	99	85.455	ENSBTAG00000031917	SCAF8	99	86.245	Bos_taurus
ENSCPOG00000022216	-	99	86.256	ENSCJAG00000012631	SCAF8	94	87.135	Callithrix_jacchus
ENSCPOG00000022216	-	99	86.278	ENSCAFG00000000570	SCAF8	99	87.066	Canis_familiaris
ENSCPOG00000022216	-	99	86.346	ENSCAFG00020015048	SCAF8	98	87.135	Canis_lupus_dingo
ENSCPOG00000022216	-	99	85.771	ENSCHIG00000025041	SCAF8	99	86.561	Capra_hircus
ENSCPOG00000022216	-	99	86.098	ENSTSYG00000010991	SCAF8	97	86.888	Carlito_syrichta
ENSCPOG00000022216	-	78	93.500	ENSCAPG00000003300	SCAF8	86	100.000	Cavia_aperea
ENSCPOG00000022216	-	99	86.177	ENSCCAG00000024952	SCAF8	99	86.967	Cebus_capucinus
ENSCPOG00000022216	-	99	88.090	ENSCATG00000035361	SCAF8	99	87.836	Cercocebus_atys
ENSCPOG00000022216	-	99	89.399	ENSCLAG00000004910	SCAF8	100	90.190	Chinchilla_lanigera
ENSCPOG00000022216	-	99	87.056	ENSCSAG00000013430	SCAF8	98	87.845	Chlorocebus_sabaeus
ENSCPOG00000022216	-	99	68.145	ENSCPBG00000016330	SCAF8	99	64.459	Chrysemys_picta_bellii
ENSCPOG00000022216	-	99	86.888	ENSCANG00000039499	SCAF8	99	87.678	Colobus_angolensis_palliatus
ENSCPOG00000022216	-	99	83.149	ENSCGRG00001020167	Scaf8	99	83.940	Cricetulus_griseus_chok1gshd
ENSCPOG00000022216	-	99	83.149	ENSCGRG00000004120	Scaf8	99	83.940	Cricetulus_griseus_crigri
ENSCPOG00000022216	-	90	57.230	ENSCSEG00000000043	-	77	50.251	Cynoglossus_semilaevis
ENSCPOG00000022216	-	84	58.540	ENSCVAG00000000925	SCAF8	77	58.018	Cyprinodon_variegatus
ENSCPOG00000022216	-	97	83.238	ENSDNOG00000025271	SCAF8	100	85.364	Dasypus_novemcinctus
ENSCPOG00000022216	-	99	84.846	ENSDORG00000006391	Scaf8	99	85.478	Dipodomys_ordii
ENSCPOG00000022216	-	99	85.872	ENSEASG00005018879	SCAF8	99	86.819	Equus_asinus_asinus
ENSCPOG00000022216	-	99	86.019	ENSECAG00000005540	SCAF8	99	86.967	Equus_caballus
ENSCPOG00000022216	-	86	56.189	ENSELUG00000002779	SCAF8	75	47.270	Esox_lucius
ENSCPOG00000022216	-	99	86.651	ENSFCAG00000023424	SCAF8	99	87.441	Felis_catus
ENSCPOG00000022216	-	99	71.306	ENSFALG00000012433	SCAF8	99	72.188	Ficedula_albicollis
ENSCPOG00000022216	-	99	89.108	ENSFDAG00000010335	SCAF8	99	89.897	Fukomys_damarensis
ENSCPOG00000022216	-	92	57.750	ENSFHEG00000008284	SCAF8	77	49.414	Fundulus_heteroclitus
ENSCPOG00000022216	-	78	49.601	ENSGMOG00000018812	SCAF8	76	51.138	Gadus_morhua
ENSCPOG00000022216	-	99	72.287	ENSGALG00000013635	SCAF8	98	72.600	Gallus_gallus
ENSCPOG00000022216	-	86	57.001	ENSGAFG00000018033	SCAF8	77	59.232	Gambusia_affinis
ENSCPOG00000022216	-	92	48.870	ENSGACG00000006909	SCAF8	99	48.866	Gasterosteus_aculeatus
ENSCPOG00000022216	-	66	72.167	ENSGAGG00000017820	-	88	72.660	Gopherus_agassizii
ENSCPOG00000022216	-	99	88.329	ENSGGOG00000008645	SCAF8	99	88.073	Gorilla_gorilla
ENSCPOG00000022216	-	87	58.374	ENSHBUG00000019537	SCAF8	79	50.461	Haplochromis_burtoni
ENSCPOG00000022216	-	99	89.012	ENSHGLG00000003619	SCAF8	99	89.802	Heterocephalus_glaber_female
ENSCPOG00000022216	-	99	89.012	ENSHGLG00100004708	SCAF8	100	89.802	Heterocephalus_glaber_male
ENSCPOG00000022216	-	99	87.687	ENSSTOG00000026043	SCAF8	99	88.477	Ictidomys_tridecemlineatus
ENSCPOG00000022216	-	99	84.111	ENSJJAG00000020480	Scaf8	99	84.834	Jaculus_jaculus
ENSCPOG00000022216	-	87	57.767	ENSKMAG00000012767	SCAF8	77	56.796	Kryptolebias_marmoratus
ENSCPOG00000022216	-	63	58.915	ENSLBEG00000012484	-	62	60.075	Labrus_bergylta
ENSCPOG00000022216	-	88	65.063	ENSLACG00000001394	SCAF8	99	57.009	Latimeria_chalumnae
ENSCPOG00000022216	-	99	54.091	ENSLOCG00000016856	SCAF8	99	53.975	Lepisosteus_oculatus
ENSCPOG00000022216	-	99	83.912	ENSLAFG00000000022	SCAF8	99	85.174	Loxodonta_africana
ENSCPOG00000022216	-	99	88.169	ENSMFAG00000032738	SCAF8	99	88.969	Macaca_fascicularis
ENSCPOG00000022216	-	99	88.169	ENSMMUG00000015163	SCAF8	99	87.915	Macaca_mulatta
ENSCPOG00000022216	-	99	87.125	ENSMNEG00000043466	SCAF8	99	87.915	Macaca_nemestrina
ENSCPOG00000022216	-	99	88.169	ENSMLEG00000034845	SCAF8	99	87.915	Mandrillus_leucophaeus
ENSCPOG00000022216	-	85	53.257	ENSMAMG00000009457	SCAF8	76	55.939	Mastacembelus_armatus
ENSCPOG00000022216	-	87	58.374	ENSMZEG00005005698	SCAF8	79	50.461	Maylandia_zebra
ENSCPOG00000022216	-	99	71.219	ENSMGAG00000012762	SCAF8	99	72.352	Meleagris_gallopavo
ENSCPOG00000022216	-	50	43.294	ENSMGAG00000014515	SCAF4	62	41.429	Meleagris_gallopavo
ENSCPOG00000022216	-	99	82.358	ENSMAUG00000009513	Scaf8	100	83.149	Mesocricetus_auratus
ENSCPOG00000022216	-	99	85.478	ENSMICG00000028965	SCAF8	99	85.872	Microcebus_murinus
ENSCPOG00000022216	-	99	83.861	ENSMOCG00000014950	Scaf8	99	84.652	Microtus_ochrogaster
ENSCPOG00000022216	-	86	51.815	ENSMMOG00000002216	SCAF8	77	47.463	Mola_mola
ENSCPOG00000022216	-	99	78.093	ENSMODG00000008301	SCAF8	99	78.881	Monodelphis_domestica
ENSCPOG00000022216	-	99	82.674	MGP_CAROLIEiJ_G0021016	Scaf8	99	83.465	Mus_caroli
ENSCPOG00000022216	-	99	82.753	ENSMUSG00000046201	Scaf8	99	83.544	Mus_musculus
ENSCPOG00000022216	-	99	83.228	MGP_PahariEiJ_G0023334	Scaf8	99	84.019	Mus_pahari
ENSCPOG00000022216	-	99	85.793	ENSMPUG00000001974	SCAF8	98	86.582	Mustela_putorius_furo
ENSCPOG00000022216	-	99	83.965	ENSMLUG00000029190	SCAF8	99	84.755	Myotis_lucifugus
ENSCPOG00000022216	-	99	84.494	ENSNGAG00000012332	Scaf8	99	85.285	Nannospalax_galili
ENSCPOG00000022216	-	99	46.311	ENSNBRG00000009067	SCAF8	99	46.215	Neolamprologus_brichardi
ENSCPOG00000022216	-	99	87.076	ENSNLEG00000015509	SCAF8	99	87.864	Nomascus_leucogenys
ENSCPOG00000022216	-	72	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSCPOG00000022216	-	99	89.652	ENSODEG00000007296	SCAF8	99	90.442	Octodon_degus
ENSCPOG00000022216	-	99	49.214	ENSONIG00000008119	SCAF8	99	48.815	Oreochromis_niloticus
ENSCPOG00000022216	-	99	86.977	ENSOCUG00000026063	SCAF8	99	87.766	Oryctolagus_cuniculus
ENSCPOG00000022216	-	62	57.692	ENSORLG00000017358	SCAF8	57	58.561	Oryzias_latipes
ENSCPOG00000022216	-	86	57.816	ENSORLG00020002214	SCAF8	77	57.196	Oryzias_latipes_hni
ENSCPOG00000022216	-	62	57.940	ENSORLG00015015779	SCAF8	57	58.685	Oryzias_latipes_hsok
ENSCPOG00000022216	-	86	57.940	ENSOMEG00000015471	SCAF8	77	57.320	Oryzias_melastigma
ENSCPOG00000022216	-	99	85.635	ENSOGAG00000034223	SCAF8	94	86.582	Otolemur_garnettii
ENSCPOG00000022216	-	99	85.692	ENSOARG00000004159	SCAF8	99	86.482	Ovis_aries
ENSCPOG00000022216	-	99	87.204	ENSPPAG00000039826	SCAF8	99	87.994	Pan_paniscus
ENSCPOG00000022216	-	99	86.730	ENSPPRG00000023175	SCAF8	99	87.520	Panthera_pardus
ENSCPOG00000022216	-	99	87.530	ENSPTIG00000014836	SCAF8	99	87.451	Panthera_tigris_altaica
ENSCPOG00000022216	-	99	87.362	ENSPTRG00000018727	SCAF8	99	88.152	Pan_troglodytes
ENSCPOG00000022216	-	99	87.850	ENSPANG00000017489	SCAF8	99	88.649	Papio_anubis
ENSCPOG00000022216	-	99	50.721	ENSPKIG00000021212	SCAF8	99	51.415	Paramormyrops_kingsleyae
ENSCPOG00000022216	-	90	70.588	ENSPSIG00000008614	SCAF8	89	76.164	Pelodiscus_sinensis
ENSCPOG00000022216	-	99	83.623	ENSPEMG00000010531	Scaf8	100	84.415	Peromyscus_maniculatus_bairdii
ENSCPOG00000022216	-	99	78.864	ENSPCIG00000001141	SCAF8	99	79.653	Phascolarctos_cinereus
ENSCPOG00000022216	-	95	58.201	ENSPFOG00000004176	SCAF8	99	47.389	Poecilia_formosa
ENSCPOG00000022216	-	86	57.940	ENSPLAG00000021432	SCAF8	77	56.824	Poecilia_latipinna
ENSCPOG00000022216	-	86	57.940	ENSPMEG00000007591	SCAF8	84	57.895	Poecilia_mexicana
ENSCPOG00000022216	-	86	58.065	ENSPREG00000000652	SCAF8	77	58.437	Poecilia_reticulata
ENSCPOG00000022216	-	99	86.514	ENSPPYG00000017121	SCAF8	99	86.987	Pongo_abelii
ENSCPOG00000022216	-	84	80.847	ENSPCAG00000013044	SCAF8	89	82.542	Procavia_capensis
ENSCPOG00000022216	-	99	86.188	ENSPCOG00000002067	SCAF8	99	86.582	Propithecus_coquereli
ENSCPOG00000022216	-	98	82.103	ENSPVAG00000005582	SCAF8	99	84.029	Pteropus_vampyrus
ENSCPOG00000022216	-	87	58.498	ENSPNYG00000007277	SCAF8	79	50.545	Pundamilia_nyererei
ENSCPOG00000022216	-	87	58.881	ENSPNAG00000024740	SCAF8	81	57.421	Pygocentrus_nattereri
ENSCPOG00000022216	-	99	82.753	ENSRNOG00000016919	Scaf8	99	83.544	Rattus_norvegicus
ENSCPOG00000022216	-	99	87.930	ENSRBIG00000035769	SCAF8	99	87.678	Rhinopithecus_bieti
ENSCPOG00000022216	-	99	88.010	ENSRROG00000013580	SCAF8	99	87.757	Rhinopithecus_roxellana
ENSCPOG00000022216	-	99	86.493	ENSSBOG00000027023	SCAF8	99	87.283	Saimiri_boliviensis_boliviensis
ENSCPOG00000022216	-	99	78.251	ENSSHAG00000009915	SCAF8	99	79.039	Sarcophilus_harrisii
ENSCPOG00000022216	-	99	49.647	ENSSFOG00015009481	SCAF8	92	54.255	Scleropages_formosus
ENSCPOG00000022216	-	92	48.102	ENSSMAG00000008275	SCAF8	76	47.815	Scophthalmus_maximus
ENSCPOG00000022216	-	99	69.674	ENSSPUG00000015219	SCAF8	99	68.788	Sphenodon_punctatus
ENSCPOG00000022216	-	99	85.782	ENSSSCG00000004070	SCAF8	100	86.640	Sus_scrofa
ENSCPOG00000022216	-	99	72.179	ENSTGUG00000011151	SCAF8	99	72.962	Taeniopygia_guttata
ENSCPOG00000022216	-	86	55.707	ENSTRUG00000009243	SCAF8	77	56.328	Takifugu_rubripes
ENSCPOG00000022216	-	92	47.671	ENSTNIG00000016885	SCAF8	99	47.211	Tetraodon_nigroviridis
ENSCPOG00000022216	-	99	85.229	ENSTTRG00000014538	SCAF8	100	86.098	Tursiops_truncatus
ENSCPOG00000022216	-	100	85.816	ENSUAMG00000024736	SCAF8	100	86.604	Ursus_americanus
ENSCPOG00000022216	-	98	85.851	ENSUMAG00000013404	SCAF8	100	86.651	Ursus_maritimus
ENSCPOG00000022216	-	67	70.139	ENSVPAG00000012465	SCAF8	99	74.368	Vicugna_pacos
ENSCPOG00000022216	-	99	86.356	ENSVVUG00000007532	SCAF8	100	87.837	Vulpes_vulpes
ENSCPOG00000022216	-	99	54.617	ENSXETG00000013132	scaf8	99	54.545	Xenopus_tropicalis
ENSCPOG00000022216	-	86	57.692	ENSXMAG00000019192	SCAF8	77	58.189	Xiphophorus_maculatus