EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000022278 (Gene tree)
Gene ID: 100725358
Gene Symbol: Rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6861 bases
Position: chrDS562930.1:5657128-5663988
Accession: 100725358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000016813	RNase_H	PF00075.24	1.2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020971	-	1375	-	ENSCPOP00000016813	294 (aa)	-	H0W1H3

Gene Model

Click here to download ENSCPOG00000022278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000022278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000022278	Rnaseh1	97	77.320	ENSG00000171865	RNASEH1	100	77.320	Homo_sapiens
ENSCPOG00000022278	Rnaseh1	87	55.147	ENSAPOG00000000412	rnaseh1	89	55.762	Acanthochromis_polyacanthus
ENSCPOG00000022278	Rnaseh1	88	82.061	ENSAMEG00000018433	RNASEH1	100	78.397	Ailuropoda_melanoleuca
ENSCPOG00000022278	Rnaseh1	87	55.597	ENSACIG00000014666	rnaseh1	87	55.597	Amphilophus_citrinellus
ENSCPOG00000022278	Rnaseh1	87	55.882	ENSAOCG00000015210	rnaseh1	89	56.134	Amphiprion_ocellaris
ENSCPOG00000022278	Rnaseh1	87	56.250	ENSAPEG00000014104	rnaseh1	89	56.506	Amphiprion_percula
ENSCPOG00000022278	Rnaseh1	87	55.762	ENSATEG00000000598	rnaseh1	94	55.762	Anabas_testudineus
ENSCPOG00000022278	Rnaseh1	82	60.938	ENSAPLG00000001961	RNASEH1	99	60.938	Anas_platyrhynchos
ENSCPOG00000022278	Rnaseh1	86	54.762	ENSACAG00000016857	rnaseh1	91	54.762	Anolis_carolinensis
ENSCPOG00000022278	Rnaseh1	97	80.420	ENSANAG00000024055	RNASEH1	100	80.420	Aotus_nancymaae
ENSCPOG00000022278	Rnaseh1	87	54.244	ENSACLG00000006741	rnaseh1	88	55.720	Astatotilapia_calliptera
ENSCPOG00000022278	Rnaseh1	87	52.918	ENSAMXG00000042940	rnaseh1	97	52.060	Astyanax_mexicanus
ENSCPOG00000022278	Rnaseh1	97	79.791	ENSBTAG00000016235	RNASEH1	100	79.791	Bos_taurus
ENSCPOG00000022278	Rnaseh1	86	40.711	WBGene00004382	rnh-1.0	95	40.711	Caenorhabditis_elegans
ENSCPOG00000022278	Rnaseh1	97	78.276	ENSCJAG00000035450	RNASEH1	100	78.276	Callithrix_jacchus
ENSCPOG00000022278	Rnaseh1	97	78.746	ENSCAFG00000003259	RNASEH1	100	78.746	Canis_familiaris
ENSCPOG00000022278	Rnaseh1	52	88.312	ENSCAFG00020004994	RNASEH1	99	88.312	Canis_lupus_dingo
ENSCPOG00000022278	Rnaseh1	97	80.139	ENSCHIG00000022264	-	100	80.139	Capra_hircus
ENSCPOG00000022278	Rnaseh1	80	69.874	ENSCHIG00000022230	-	100	69.874	Capra_hircus
ENSCPOG00000022278	Rnaseh1	98	79.585	ENSTSYG00000012926	RNASEH1	100	79.585	Carlito_syrichta
ENSCPOG00000022278	Rnaseh1	82	100.000	ENSCAPG00000004813	RNASEH1	100	100.000	Cavia_aperea
ENSCPOG00000022278	Rnaseh1	97	78.621	ENSCCAG00000038017	RNASEH1	100	78.621	Cebus_capucinus
ENSCPOG00000022278	Rnaseh1	97	77.622	ENSCATG00000016515	-	100	77.622	Cercocebus_atys
ENSCPOG00000022278	Rnaseh1	97	70.979	ENSCATG00000016818	-	100	70.979	Cercocebus_atys
ENSCPOG00000022278	Rnaseh1	97	90.845	ENSCLAG00000002440	RNASEH1	100	90.845	Chinchilla_lanigera
ENSCPOG00000022278	Rnaseh1	97	76.923	ENSCSAG00000006943	RNASEH1	100	76.923	Chlorocebus_sabaeus
ENSCPOG00000022278	Rnaseh1	67	81.218	ENSCHOG00000008547	RNASEH1	97	81.218	Choloepus_hoffmanni
ENSCPOG00000022278	Rnaseh1	86	64.925	ENSCPBG00000021620	RNASEH1	98	64.925	Chrysemys_picta_bellii
ENSCPOG00000022278	Rnaseh1	87	39.286	ENSCING00000014054	-	92	39.286	Ciona_intestinalis
ENSCPOG00000022278	Rnaseh1	73	38.496	ENSCSAVG00000000009	-	96	38.496	Ciona_savignyi
ENSCPOG00000022278	Rnaseh1	97	77.273	ENSCANG00000037763	RNASEH1	100	77.273	Colobus_angolensis_palliatus
ENSCPOG00000022278	Rnaseh1	97	78.322	ENSCGRG00001008950	Rnaseh1	100	78.671	Cricetulus_griseus_chok1gshd
ENSCPOG00000022278	Rnaseh1	97	78.322	ENSCGRG00000006029	Rnaseh1	100	78.671	Cricetulus_griseus_crigri
ENSCPOG00000022278	Rnaseh1	86	52.326	ENSCSEG00000005741	rnaseh1	93	52.399	Cynoglossus_semilaevis
ENSCPOG00000022278	Rnaseh1	87	55.805	ENSCVAG00000018717	rnaseh1	88	55.805	Cyprinodon_variegatus
ENSCPOG00000022278	Rnaseh1	87	54.815	ENSDARG00000042571	rnaseh1	97	54.815	Danio_rerio
ENSCPOG00000022278	Rnaseh1	88	78.626	ENSDNOG00000016056	RNASEH1	91	78.626	Dasypus_novemcinctus
ENSCPOG00000022278	Rnaseh1	97	79.371	ENSDORG00000000704	Rnaseh1	100	79.371	Dipodomys_ordii
ENSCPOG00000022278	Rnaseh1	86	36.678	FBgn0023171	rnh1	92	36.678	Drosophila_melanogaster
ENSCPOG00000022278	Rnaseh1	97	71.777	ENSETEG00000012674	RNASEH1	100	71.777	Echinops_telfairi
ENSCPOG00000022278	Rnaseh1	89	47.148	ENSEBUG00000006116	rnaseh1	79	47.148	Eptatretus_burgeri
ENSCPOG00000022278	Rnaseh1	86	47.059	ENSEBUG00000008898	rnaseh1	97	47.059	Eptatretus_burgeri
ENSCPOG00000022278	Rnaseh1	98	76.370	ENSEASG00005022200	RNASEH1	100	76.370	Equus_asinus_asinus
ENSCPOG00000022278	Rnaseh1	98	76.370	ENSECAG00000020695	RNASEH1	100	76.370	Equus_caballus
ENSCPOG00000022278	Rnaseh1	87	54.815	ENSELUG00000010112	rnaseh1	91	54.815	Esox_lucius
ENSCPOG00000022278	Rnaseh1	97	78.397	ENSFCAG00000025832	RNASEH1	100	78.397	Felis_catus
ENSCPOG00000022278	Rnaseh1	96	57.143	ENSFALG00000002069	RNASEH1	99	57.143	Ficedula_albicollis
ENSCPOG00000022278	Rnaseh1	97	85.563	ENSFDAG00000002035	RNASEH1	88	85.563	Fukomys_damarensis
ENSCPOG00000022278	Rnaseh1	86	55.344	ENSGMOG00000013818	rnaseh1	88	55.344	Gadus_morhua
ENSCPOG00000022278	Rnaseh1	95	57.667	ENSGALG00000016389	RNASEH1	98	57.667	Gallus_gallus
ENSCPOG00000022278	Rnaseh1	87	55.224	ENSGAFG00000001776	rnaseh1	91	55.224	Gambusia_affinis
ENSCPOG00000022278	Rnaseh1	86	53.788	ENSGACG00000011935	rnaseh1	88	53.788	Gasterosteus_aculeatus
ENSCPOG00000022278	Rnaseh1	86	62.313	ENSGAGG00000009150	RNASEH1	61	63.060	Gopherus_agassizii
ENSCPOG00000022278	Rnaseh1	97	77.320	ENSGGOG00000034822	RNASEH1	100	77.320	Gorilla_gorilla
ENSCPOG00000022278	Rnaseh1	87	53.875	ENSHBUG00000004666	rnaseh1	88	55.351	Haplochromis_burtoni
ENSCPOG00000022278	Rnaseh1	97	86.620	ENSHGLG00000002585	Rnaseh1	92	86.620	Heterocephalus_glaber_female
ENSCPOG00000022278	Rnaseh1	97	86.620	ENSHGLG00100005105	Rnaseh1	92	86.620	Heterocephalus_glaber_male
ENSCPOG00000022278	Rnaseh1	86	54.244	ENSHCOG00000012329	rnaseh1	88	54.244	Hippocampus_comes
ENSCPOG00000022278	Rnaseh1	87	62.016	ENSIPUG00000023060	rnaseh1	97	62.016	Ictalurus_punctatus
ENSCPOG00000022278	Rnaseh1	95	81.139	ENSSTOG00000012774	RNASEH1	100	81.139	Ictidomys_tridecemlineatus
ENSCPOG00000022278	Rnaseh1	97	71.479	ENSJJAG00000021481	-	100	71.479	Jaculus_jaculus
ENSCPOG00000022278	Rnaseh1	97	64.437	ENSJJAG00000008994	-	100	64.437	Jaculus_jaculus
ENSCPOG00000022278	Rnaseh1	87	76.953	ENSJJAG00000020238	Rnaseh1	100	76.953	Jaculus_jaculus
ENSCPOG00000022278	Rnaseh1	96	52.560	ENSKMAG00000001373	rnaseh1	97	52.560	Kryptolebias_marmoratus
ENSCPOG00000022278	Rnaseh1	87	53.532	ENSLBEG00000004480	rnaseh1	95	54.135	Labrus_bergylta
ENSCPOG00000022278	Rnaseh1	88	54.874	ENSLACG00000007100	RNASEH1	89	55.596	Latimeria_chalumnae
ENSCPOG00000022278	Rnaseh1	87	57.037	ENSLOCG00000017212	rnaseh1	97	57.037	Lepisosteus_oculatus
ENSCPOG00000022278	Rnaseh1	96	75.524	ENSLAFG00000015091	RNASEH1	99	75.524	Loxodonta_africana
ENSCPOG00000022278	Rnaseh1	97	77.273	ENSMFAG00000000063	-	100	77.273	Macaca_fascicularis
ENSCPOG00000022278	Rnaseh1	97	70.629	ENSMFAG00000002323	-	100	70.629	Macaca_fascicularis
ENSCPOG00000022278	Rnaseh1	97	70.280	ENSMMUG00000019280	-	100	70.280	Macaca_mulatta
ENSCPOG00000022278	Rnaseh1	97	77.622	ENSMNEG00000040183	-	100	77.622	Macaca_nemestrina
ENSCPOG00000022278	Rnaseh1	97	71.329	ENSMNEG00000029676	-	100	71.329	Macaca_nemestrina
ENSCPOG00000022278	Rnaseh1	97	73.776	ENSMLEG00000028662	-	100	73.776	Mandrillus_leucophaeus
ENSCPOG00000022278	Rnaseh1	82	81.481	ENSMLEG00000039352	-	100	81.481	Mandrillus_leucophaeus
ENSCPOG00000022278	Rnaseh1	87	56.506	ENSMAMG00000019725	rnaseh1	94	56.506	Mastacembelus_armatus
ENSCPOG00000022278	Rnaseh1	87	54.244	ENSMZEG00005013006	rnaseh1	88	55.720	Maylandia_zebra
ENSCPOG00000022278	Rnaseh1	77	59.671	ENSMGAG00000013979	RNASEH1	98	59.671	Meleagris_gallopavo
ENSCPOG00000022278	Rnaseh1	96	77.895	ENSMAUG00000014957	Rnaseh1	99	77.895	Mesocricetus_auratus
ENSCPOG00000022278	Rnaseh1	97	81.818	ENSMICG00000033156	RNASEH1	99	81.818	Microcebus_murinus
ENSCPOG00000022278	Rnaseh1	97	75.779	ENSMOCG00000015522	Rnaseh1	100	75.779	Microtus_ochrogaster
ENSCPOG00000022278	Rnaseh1	86	54.373	ENSMMOG00000015902	rnaseh1	87	54.373	Mola_mola
ENSCPOG00000022278	Rnaseh1	77	60.793	ENSMODG00000028814	-	92	61.233	Monodelphis_domestica
ENSCPOG00000022278	Rnaseh1	88	72.137	ENSMODG00000014491	-	90	72.137	Monodelphis_domestica
ENSCPOG00000022278	Rnaseh1	87	54.779	ENSMALG00000010565	rnaseh1	89	54.779	Monopterus_albus
ENSCPOG00000022278	Rnaseh1	97	78.322	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	78.322	Mus_caroli
ENSCPOG00000022278	Rnaseh1	97	78.671	ENSMUSG00000020630	Rnaseh1	100	78.671	Mus_musculus
ENSCPOG00000022278	Rnaseh1	96	78.596	MGP_PahariEiJ_G0029418	Rnaseh1	99	78.596	Mus_pahari
ENSCPOG00000022278	Rnaseh1	97	78.671	MGP_SPRETEiJ_G0018502	Rnaseh1	100	78.671	Mus_spretus
ENSCPOG00000022278	Rnaseh1	68	81.095	ENSMPUG00000012984	RNASEH1	97	81.095	Mustela_putorius_furo
ENSCPOG00000022278	Rnaseh1	95	79.078	ENSNGAG00000015966	Rnaseh1	92	79.078	Nannospalax_galili
ENSCPOG00000022278	Rnaseh1	87	54.613	ENSNBRG00000008739	rnaseh1	88	56.089	Neolamprologus_brichardi
ENSCPOG00000022278	Rnaseh1	97	65.870	ENSNLEG00000015400	RNASEH1	100	65.870	Nomascus_leucogenys
ENSCPOG00000022278	Rnaseh1	81	73.251	ENSNLEG00000000059	-	91	73.251	Nomascus_leucogenys
ENSCPOG00000022278	Rnaseh1	88	50.000	ENSMEUG00000003610	-	92	50.000	Notamacropus_eugenii
ENSCPOG00000022278	Rnaseh1	97	74.653	ENSOPRG00000005072	RNASEH1	100	74.653	Ochotona_princeps
ENSCPOG00000022278	Rnaseh1	100	85.374	ENSODEG00000000235	Rnaseh1	100	85.374	Octodon_degus
ENSCPOG00000022278	Rnaseh1	87	55.720	ENSONIG00000018697	rnaseh1	97	55.720	Oreochromis_niloticus
ENSCPOG00000022278	Rnaseh1	97	77.972	ENSOCUG00000006117	RNASEH1	100	77.972	Oryctolagus_cuniculus
ENSCPOG00000022278	Rnaseh1	87	58.113	ENSORLG00000018127	rnaseh1	95	58.113	Oryzias_latipes
ENSCPOG00000022278	Rnaseh1	89	57.407	ENSORLG00020013660	rnaseh1	90	57.407	Oryzias_latipes_hni
ENSCPOG00000022278	Rnaseh1	89	57.778	ENSORLG00015011338	rnaseh1	90	57.778	Oryzias_latipes_hsok
ENSCPOG00000022278	Rnaseh1	86	52.326	ENSOMEG00000004710	rnaseh1	98	52.326	Oryzias_melastigma
ENSCPOG00000022278	Rnaseh1	96	80.634	ENSOGAG00000017176	RNASEH1	99	80.634	Otolemur_garnettii
ENSCPOG00000022278	Rnaseh1	97	68.601	ENSOARG00000005386	RNASEH1	100	68.601	Ovis_aries
ENSCPOG00000022278	Rnaseh1	97	77.320	ENSPPAG00000034221	RNASEH1	100	77.320	Pan_paniscus
ENSCPOG00000022278	Rnaseh1	97	78.049	ENSPPRG00000015513	RNASEH1	100	78.049	Panthera_pardus
ENSCPOG00000022278	Rnaseh1	82	81.893	ENSPTIG00000019034	RNASEH1	85	81.893	Panthera_tigris_altaica
ENSCPOG00000022278	Rnaseh1	97	77.320	ENSPTRG00000011614	RNASEH1	100	77.320	Pan_troglodytes
ENSCPOG00000022278	Rnaseh1	84	71.206	ENSPTRG00000043403	-	97	71.206	Pan_troglodytes
ENSCPOG00000022278	Rnaseh1	97	68.531	ENSPANG00000018246	-	100	68.531	Papio_anubis
ENSCPOG00000022278	Rnaseh1	97	77.273	ENSPANG00000000443	RNASEH1	99	81.557	Papio_anubis
ENSCPOG00000022278	Rnaseh1	86	52.326	ENSPKIG00000003146	rnaseh1	97	51.538	Paramormyrops_kingsleyae
ENSCPOG00000022278	Rnaseh1	86	63.296	ENSPSIG00000002937	RNASEH1	98	63.296	Pelodiscus_sinensis
ENSCPOG00000022278	Rnaseh1	86	54.826	ENSPMGG00000017463	rnaseh1	90	54.826	Periophthalmus_magnuspinnatus
ENSCPOG00000022278	Rnaseh1	97	76.307	ENSPEMG00000022465	-	100	77.003	Peromyscus_maniculatus_bairdii
ENSCPOG00000022278	Rnaseh1	50	42.568	ENSPCIG00000026047	-	83	42.857	Phascolarctos_cinereus
ENSCPOG00000022278	Rnaseh1	89	70.149	ENSPCIG00000023334	-	92	70.149	Phascolarctos_cinereus
ENSCPOG00000022278	Rnaseh1	87	56.134	ENSPFOG00000002841	rnaseh1	91	56.134	Poecilia_formosa
ENSCPOG00000022278	Rnaseh1	62	50.267	ENSPLAG00000021349	-	74	50.267	Poecilia_latipinna
ENSCPOG00000022278	Rnaseh1	87	55.762	ENSPMEG00000016826	rnaseh1	91	55.762	Poecilia_mexicana
ENSCPOG00000022278	Rnaseh1	86	55.185	ENSPREG00000012197	rnaseh1	89	55.185	Poecilia_reticulata
ENSCPOG00000022278	Rnaseh1	88	72.932	ENSPPYG00000008067	-	100	72.932	Pongo_abelii
ENSCPOG00000022278	Rnaseh1	97	67.832	ENSPPYG00000025873	RNASEH1	100	67.832	Pongo_abelii
ENSCPOG00000022278	Rnaseh1	96	72.632	ENSPCAG00000002500	RNASEH1	99	72.632	Procavia_capensis
ENSCPOG00000022278	Rnaseh1	96	73.239	ENSPCOG00000019444	RNASEH1	99	73.239	Propithecus_coquereli
ENSCPOG00000022278	Rnaseh1	96	76.140	ENSPVAG00000002070	RNASEH1	99	76.140	Pteropus_vampyrus
ENSCPOG00000022278	Rnaseh1	87	53.875	ENSPNYG00000001292	rnaseh1	88	55.351	Pundamilia_nyererei
ENSCPOG00000022278	Rnaseh1	87	59.696	ENSPNAG00000022344	rnaseh1	90	59.696	Pygocentrus_nattereri
ENSCPOG00000022278	Rnaseh1	96	78.596	ENSRNOG00000008584	Rnaseh1	99	78.596	Rattus_norvegicus
ENSCPOG00000022278	Rnaseh1	97	77.083	ENSRBIG00000034222	RNASEH1	99	77.083	Rhinopithecus_bieti
ENSCPOG00000022278	Rnaseh1	97	77.083	ENSRROG00000041761	RNASEH1	99	77.083	Rhinopithecus_roxellana
ENSCPOG00000022278	Rnaseh1	97	78.276	ENSSBOG00000025411	RNASEH1	100	78.276	Saimiri_boliviensis_boliviensis
ENSCPOG00000022278	Rnaseh1	88	73.384	ENSSHAG00000013051	RNASEH1	89	73.384	Sarcophilus_harrisii
ENSCPOG00000022278	Rnaseh1	87	52.174	ENSSFOG00015002709	rnaseh1	91	52.174	Scleropages_formosus
ENSCPOG00000022278	Rnaseh1	87	55.390	ENSSMAG00000007586	rnaseh1	88	55.390	Scophthalmus_maximus
ENSCPOG00000022278	Rnaseh1	87	53.358	ENSSDUG00000008217	rnaseh1	94	53.731	Seriola_dumerili
ENSCPOG00000022278	Rnaseh1	85	54.373	ENSSLDG00000000442	rnaseh1	94	55.556	Seriola_lalandi_dorsalis
ENSCPOG00000022278	Rnaseh1	87	60.440	ENSSPUG00000006644	RNASEH1	93	60.440	Sphenodon_punctatus
ENSCPOG00000022278	Rnaseh1	87	55.970	ENSSPAG00000009353	rnaseh1	88	56.343	Stegastes_partitus
ENSCPOG00000022278	Rnaseh1	90	79.926	ENSSSCG00000025305	RNASEH1	99	77.193	Sus_scrofa
ENSCPOG00000022278	Rnaseh1	96	55.960	ENSTGUG00000012980	RNASEH1	99	56.291	Taeniopygia_guttata
ENSCPOG00000022278	Rnaseh1	97	51.689	ENSTRUG00000015774	rnaseh1	98	54.015	Takifugu_rubripes
ENSCPOG00000022278	Rnaseh1	87	57.196	ENSTNIG00000010715	rnaseh1	96	57.196	Tetraodon_nigroviridis
ENSCPOG00000022278	Rnaseh1	97	73.519	ENSTTRG00000001615	RNASEH1	100	73.519	Tursiops_truncatus
ENSCPOG00000022278	Rnaseh1	52	87.662	ENSUAMG00000018254	RNASEH1	80	87.662	Ursus_americanus
ENSCPOG00000022278	Rnaseh1	66	78.680	ENSUMAG00000003941	RNASEH1	65	78.680	Ursus_maritimus
ENSCPOG00000022278	Rnaseh1	97	66.434	ENSVPAG00000011589	RNASEH1	100	66.434	Vicugna_pacos
ENSCPOG00000022278	Rnaseh1	97	79.791	ENSVVUG00000008633	RNASEH1	90	79.791	Vulpes_vulpes
ENSCPOG00000022278	Rnaseh1	87	45.882	ENSXETG00000030371	-	100	45.882	Xenopus_tropicalis
ENSCPOG00000022278	Rnaseh1	87	54.478	ENSXETG00000001212	rnaseh1	91	55.431	Xenopus_tropicalis
ENSCPOG00000022278	Rnaseh1	86	53.933	ENSXMAG00000002357	rnaseh1	89	53.933	Xiphophorus_maculatus