EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000022653 (Gene tree)
Gene ID: 100732819
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 20665 bases
Position: chrDS562916.1:8764727-8785391
Accession: 100732819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000016647	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000027480	CHD3-201	6012	XM_013148652	ENSCPOP00000016647	2003 (aa)	-	H0W109

Gene Model

Click here to download ENSCPOG00000022653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000022653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000022653	CHD3	89	71.168	ENSCPOG00000008504	-	96	69.740
ENSCPOG00000022653	CHD3	94	69.115	ENSCPOG00000025080	CHD5	98	69.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000022653	CHD3	99	97.441	ENSG00000170004	CHD3	99	97.538	Homo_sapiens
ENSCPOG00000022653	CHD3	78	82.447	ENSAPOG00000005614	chd3	94	82.447	Acanthochromis_polyacanthus
ENSCPOG00000022653	CHD3	68	96.848	ENSAMEG00000003025	-	100	96.848	Ailuropoda_melanoleuca
ENSCPOG00000022653	CHD3	80	79.798	ENSACIG00000019671	chd3	99	79.803	Amphilophus_citrinellus
ENSCPOG00000022653	CHD3	79	81.152	ENSAOCG00000023784	chd3	97	81.317	Amphiprion_ocellaris
ENSCPOG00000022653	CHD3	74	76.712	ENSAPEG00000006341	chd3	96	72.933	Amphiprion_percula
ENSCPOG00000022653	CHD3	84	72.786	ENSATEG00000000848	chd3	99	73.548	Anabas_testudineus
ENSCPOG00000022653	CHD3	97	85.429	ENSACAG00000004276	CHD3	96	84.488	Anolis_carolinensis
ENSCPOG00000022653	CHD3	99	94.841	ENSANAG00000034323	CHD3	99	98.185	Aotus_nancymaae
ENSCPOG00000022653	CHD3	90	80.707	ENSACLG00000009222	chd3	99	73.265	Astatotilapia_calliptera
ENSCPOG00000022653	CHD3	98	97.461	ENSBTAG00000014377	CHD3	97	97.500	Bos_taurus
ENSCPOG00000022653	CHD3	99	97.528	ENSCJAG00000014766	CHD3	99	97.141	Callithrix_jacchus
ENSCPOG00000022653	CHD3	99	96.839	ENSCAFG00000016859	CHD3	99	96.839	Canis_familiaris
ENSCPOG00000022653	CHD3	94	97.496	ENSCAFG00020007422	CHD3	100	97.654	Canis_lupus_dingo
ENSCPOG00000022653	CHD3	99	97.423	ENSCHIG00000016737	CHD3	100	97.423	Capra_hircus
ENSCPOG00000022653	CHD3	99	97.291	ENSTSYG00000035658	CHD3	99	97.291	Carlito_syrichta
ENSCPOG00000022653	CHD3	100	97.404	ENSCAPG00000014864	CHD3	100	97.404	Cavia_aperea
ENSCPOG00000022653	CHD3	99	97.140	ENSCCAG00000034792	CHD3	99	97.140	Cebus_capucinus
ENSCPOG00000022653	CHD3	99	97.190	ENSCATG00000041717	CHD3	99	97.190	Cercocebus_atys
ENSCPOG00000022653	CHD3	98	98.373	ENSCLAG00000010523	CHD3	100	98.373	Chinchilla_lanigera
ENSCPOG00000022653	CHD3	98	97.764	ENSCSAG00000011122	CHD3	99	97.764	Chlorocebus_sabaeus
ENSCPOG00000022653	CHD3	89	83.184	ENSCPBG00000011966	CHD3	99	86.471	Chrysemys_picta_bellii
ENSCPOG00000022653	CHD3	99	97.140	ENSCANG00000037641	CHD3	99	97.140	Colobus_angolensis_palliatus
ENSCPOG00000022653	CHD3	98	97.256	ENSCGRG00001011306	Chd3	100	97.256	Cricetulus_griseus_chok1gshd
ENSCPOG00000022653	CHD3	93	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSCPOG00000022653	CHD3	83	86.147	ENSCSEG00000004489	chd3	99	76.024	Cynoglossus_semilaevis
ENSCPOG00000022653	CHD3	86	82.927	ENSCVAG00000007293	chd3	95	82.927	Cyprinodon_variegatus
ENSCPOG00000022653	CHD3	90	82.215	ENSDARG00000021405	chd3	99	75.288	Danio_rerio
ENSCPOG00000022653	CHD3	98	82.745	ENSDNOG00000047846	CHD3	99	82.593	Dasypus_novemcinctus
ENSCPOG00000022653	CHD3	98	97.153	ENSDORG00000010713	Chd3	100	97.153	Dipodomys_ordii
ENSCPOG00000022653	CHD3	96	91.282	ENSETEG00000017733	CHD3	100	91.282	Echinops_telfairi
ENSCPOG00000022653	CHD3	75	69.649	ENSEBUG00000008310	chd3	99	70.370	Eptatretus_burgeri
ENSCPOG00000022653	CHD3	91	97.818	ENSEASG00005019360	CHD3	100	97.818	Equus_asinus_asinus
ENSCPOG00000022653	CHD3	91	97.872	ENSECAG00000010051	CHD3	100	97.872	Equus_caballus
ENSCPOG00000022653	CHD3	91	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSCPOG00000022653	CHD3	80	76.767	ENSELUG00000019499	chd3	99	77.101	Esox_lucius
ENSCPOG00000022653	CHD3	98	97.358	ENSFCAG00000009629	CHD3	96	97.358	Felis_catus
ENSCPOG00000022653	CHD3	99	95.650	ENSFDAG00000008220	CHD3	99	95.650	Fukomys_damarensis
ENSCPOG00000022653	CHD3	87	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSCPOG00000022653	CHD3	58	74.403	ENSGAFG00000004055	chd3	99	76.752	Gambusia_affinis
ENSCPOG00000022653	CHD3	97	70.675	ENSGACG00000019275	chd3	100	70.668	Gasterosteus_aculeatus
ENSCPOG00000022653	CHD3	75	85.695	ENSGAGG00000013164	CHD3	98	86.257	Gopherus_agassizii
ENSCPOG00000022653	CHD3	99	97.441	ENSGGOG00000013496	CHD3	99	97.441	Gorilla_gorilla
ENSCPOG00000022653	CHD3	98	98.222	ENSHGLG00000012017	CHD3	99	98.222	Heterocephalus_glaber_female
ENSCPOG00000022653	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSCPOG00000022653	CHD3	93	72.437	ENSHCOG00000010170	chd3	96	73.167	Hippocampus_comes
ENSCPOG00000022653	CHD3	83	79.859	ENSIPUG00000003271	chd3	94	79.363	Ictalurus_punctatus
ENSCPOG00000022653	CHD3	99	97.091	ENSSTOG00000025907	CHD3	99	97.867	Ictidomys_tridecemlineatus
ENSCPOG00000022653	CHD3	99	96.088	ENSJJAG00000017633	Chd3	100	96.899	Jaculus_jaculus
ENSCPOG00000022653	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	74.127	Kryptolebias_marmoratus
ENSCPOG00000022653	CHD3	95	68.932	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSCPOG00000022653	CHD3	95	74.065	ENSLACG00000008031	CHD3	98	73.446	Latimeria_chalumnae
ENSCPOG00000022653	CHD3	96	76.854	ENSLOCG00000013965	chd3	97	77.223	Lepisosteus_oculatus
ENSCPOG00000022653	CHD3	94	93.588	ENSLAFG00000000572	CHD3	100	93.588	Loxodonta_africana
ENSCPOG00000022653	CHD3	99	97.190	ENSMFAG00000020113	CHD3	99	97.190	Macaca_fascicularis
ENSCPOG00000022653	CHD3	99	94.832	ENSMMUG00000022221	CHD3	99	94.832	Macaca_mulatta
ENSCPOG00000022653	CHD3	99	97.140	ENSMNEG00000001728	CHD3	99	97.488	Macaca_nemestrina
ENSCPOG00000022653	CHD3	99	97.190	ENSMLEG00000032249	CHD3	99	97.190	Mandrillus_leucophaeus
ENSCPOG00000022653	CHD3	84	75.191	ENSMAMG00000000564	chd3	99	75.394	Mastacembelus_armatus
ENSCPOG00000022653	CHD3	99	96.567	ENSMAUG00000013873	Chd3	97	96.567	Mesocricetus_auratus
ENSCPOG00000022653	CHD3	98	97.917	ENSMICG00000008741	CHD3	96	97.917	Microcebus_murinus
ENSCPOG00000022653	CHD3	98	97.352	ENSMOCG00000004848	Chd3	100	97.352	Microtus_ochrogaster
ENSCPOG00000022653	CHD3	94	73.840	ENSMMOG00000012699	chd3	99	73.316	Mola_mola
ENSCPOG00000022653	CHD3	91	92.585	ENSMODG00000007509	CHD3	100	92.585	Monodelphis_domestica
ENSCPOG00000022653	CHD3	99	96.322	MGP_CAROLIEiJ_G0016564	Chd3	100	95.417	Mus_caroli
ENSCPOG00000022653	CHD3	99	96.474	ENSMUSG00000018474	Chd3	99	95.573	Mus_musculus
ENSCPOG00000022653	CHD3	99	96.522	MGP_PahariEiJ_G0017695	Chd3	100	95.623	Mus_pahari
ENSCPOG00000022653	CHD3	99	96.474	MGP_SPRETEiJ_G0017400	Chd3	100	95.573	Mus_spretus
ENSCPOG00000022653	CHD3	85	97.550	ENSMPUG00000008861	CHD3	100	97.550	Mustela_putorius_furo
ENSCPOG00000022653	CHD3	99	95.842	ENSMLUG00000014643	-	99	95.842	Myotis_lucifugus
ENSCPOG00000022653	CHD3	98	97.612	ENSNGAG00000000773	Chd3	98	97.612	Nannospalax_galili
ENSCPOG00000022653	CHD3	85	75.000	ENSNBRG00000000636	chd3	97	75.587	Neolamprologus_brichardi
ENSCPOG00000022653	CHD3	99	93.677	ENSNLEG00000009770	CHD3	100	94.966	Nomascus_leucogenys
ENSCPOG00000022653	CHD3	84	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSCPOG00000022653	CHD3	93	96.209	ENSOPRG00000011069	CHD3	100	96.209	Ochotona_princeps
ENSCPOG00000022653	CHD3	99	97.186	ENSODEG00000017785	CHD3	100	97.186	Octodon_degus
ENSCPOG00000022653	CHD3	74	77.485	ENSONIG00000009292	chd3	100	73.980	Oreochromis_niloticus
ENSCPOG00000022653	CHD3	98	92.930	ENSOCUG00000029299	CHD3	100	92.781	Oryctolagus_cuniculus
ENSCPOG00000022653	CHD3	81	70.560	ENSORLG00000007107	chd3	93	70.627	Oryzias_latipes
ENSCPOG00000022653	CHD3	56	72.374	ENSORLG00020008387	chd3	95	73.522	Oryzias_latipes_hni
ENSCPOG00000022653	CHD3	98	97.511	ENSOGAG00000003216	CHD3	99	97.511	Otolemur_garnettii
ENSCPOG00000022653	CHD3	99	95.106	ENSOARG00000017855	CHD3	99	95.106	Ovis_aries
ENSCPOG00000022653	CHD3	99	95.104	ENSPPAG00000032886	CHD3	99	95.104	Pan_paniscus
ENSCPOG00000022653	CHD3	100	95.970	ENSPPRG00000000626	CHD3	99	96.839	Panthera_pardus
ENSCPOG00000022653	CHD3	99	97.491	ENSPTRG00000008714	CHD3	99	97.491	Pan_troglodytes
ENSCPOG00000022653	CHD3	99	97.190	ENSPANG00000023938	CHD3	99	97.190	Papio_anubis
ENSCPOG00000022653	CHD3	93	79.102	ENSPKIG00000006305	chd3	99	79.102	Paramormyrops_kingsleyae
ENSCPOG00000022653	CHD3	54	90.420	ENSPSIG00000010177	CHD3	98	90.785	Pelodiscus_sinensis
ENSCPOG00000022653	CHD3	99	96.867	ENSPEMG00000014262	Chd3	99	96.867	Peromyscus_maniculatus_bairdii
ENSCPOG00000022653	CHD3	98	92.534	ENSPCIG00000005442	CHD3	97	96.296	Phascolarctos_cinereus
ENSCPOG00000022653	CHD3	94	71.986	ENSPFOG00000012464	chd3	92	73.782	Poecilia_formosa
ENSCPOG00000022653	CHD3	86	83.333	ENSPLAG00000002887	chd3	96	83.333	Poecilia_latipinna
ENSCPOG00000022653	CHD3	52	80.908	ENSPMEG00000016725	chd3	94	73.420	Poecilia_mexicana
ENSCPOG00000022653	CHD3	90	80.488	ENSPREG00000011044	chd3	99	77.922	Poecilia_reticulata
ENSCPOG00000022653	CHD3	99	92.674	ENSPPYG00000007940	CHD3	99	92.674	Pongo_abelii
ENSCPOG00000022653	CHD3	95	97.061	ENSPCAG00000004350	CHD3	96	97.061	Procavia_capensis
ENSCPOG00000022653	CHD3	99	96.991	ENSPCOG00000020952	CHD3	99	96.991	Propithecus_coquereli
ENSCPOG00000022653	CHD3	85	96.499	ENSPVAG00000016344	CHD3	87	96.499	Pteropus_vampyrus
ENSCPOG00000022653	CHD3	88	79.972	ENSPNAG00000020393	chd3	98	80.000	Pygocentrus_nattereri
ENSCPOG00000022653	CHD3	91	96.460	ENSRNOG00000009722	Chd3	100	96.460	Rattus_norvegicus
ENSCPOG00000022653	CHD3	99	94.103	ENSRBIG00000033562	CHD3	99	94.558	Rhinopithecus_bieti
ENSCPOG00000022653	CHD3	99	95.635	ENSRROG00000029554	CHD3	100	95.934	Rhinopithecus_roxellana
ENSCPOG00000022653	CHD3	99	97.291	ENSSBOG00000020719	CHD3	99	97.652	Saimiri_boliviensis_boliviensis
ENSCPOG00000022653	CHD3	98	92.959	ENSSHAG00000014412	CHD3	100	92.959	Sarcophilus_harrisii
ENSCPOG00000022653	CHD3	90	74.260	ENSSFOG00015023123	chd3	98	74.596	Scleropages_formosus
ENSCPOG00000022653	CHD3	77	91.304	ENSSMAG00000006451	chd3	99	75.264	Scophthalmus_maximus
ENSCPOG00000022653	CHD3	54	72.527	ENSSDUG00000005792	chd3	95	73.718	Seriola_dumerili
ENSCPOG00000022653	CHD3	80	80.928	ENSSPAG00000013694	chd3	99	80.928	Stegastes_partitus
ENSCPOG00000022653	CHD3	98	97.768	ENSSSCG00000021363	CHD3	100	97.874	Sus_scrofa
ENSCPOG00000022653	CHD3	74	76.428	ENSTRUG00000014990	chd3	89	75.989	Takifugu_rubripes
ENSCPOG00000022653	CHD3	96	72.588	ENSTNIG00000012998	chd3	99	72.333	Tetraodon_nigroviridis
ENSCPOG00000022653	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCPOG00000022653	CHD3	97	97.972	ENSTTRG00000010295	CHD3	97	97.972	Tursiops_truncatus
ENSCPOG00000022653	CHD3	91	96.625	ENSUAMG00000005475	CHD3	99	96.625	Ursus_americanus
ENSCPOG00000022653	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCPOG00000022653	CHD3	94	97.496	ENSVVUG00000028011	CHD3	99	97.496	Vulpes_vulpes
ENSCPOG00000022653	CHD3	97	72.417	ENSXETG00000012991	chd3	97	71.272	Xenopus_tropicalis
ENSCPOG00000022653	CHD3	51	82.413	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSCPOG00000022653	CHD3	78	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus