EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000022687 (Gene tree)
Gene ID: 100734294
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 19165 bases
Position: chrDS562860.1:59890844-59910008
Accession: 100734294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000018303	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000026297	LARP6-201	2435	XM_003477637	ENSCPOP00000018303	492 (aa)	XP_003477685	H0W5P9

Gene Model

Click here to download ENSCPOG00000022687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000022687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000022687	LARP6	100	90.061	ENSG00000166173	LARP6	100	90.323	Homo_sapiens
ENSCPOG00000022687	LARP6	96	55.828	ENSAPOG00000021773	larp6a	67	55.828	Acanthochromis_polyacanthus
ENSCPOG00000022687	LARP6	86	88.679	ENSAMEG00000008897	LARP6	99	88.679	Ailuropoda_melanoleuca
ENSCPOG00000022687	LARP6	98	55.800	ENSACIG00000005166	larp6a	94	55.400	Amphilophus_citrinellus
ENSCPOG00000022687	LARP6	96	55.828	ENSAOCG00000002284	larp6a	67	55.828	Amphiprion_ocellaris
ENSCPOG00000022687	LARP6	96	55.828	ENSAPEG00000008077	larp6a	90	55.828	Amphiprion_percula
ENSCPOG00000022687	LARP6	96	56.033	ENSATEG00000004018	larp6a	66	55.828	Anabas_testudineus
ENSCPOG00000022687	LARP6	85	70.213	ENSAPLG00000009914	LARP6	99	70.213	Anas_platyrhynchos
ENSCPOG00000022687	LARP6	84	67.952	ENSACAG00000008613	LARP6	97	67.952	Anolis_carolinensis
ENSCPOG00000022687	LARP6	100	90.264	ENSANAG00000024860	LARP6	100	90.264	Aotus_nancymaae
ENSCPOG00000022687	LARP6	97	55.936	ENSACLG00000018561	larp6a	66	55.533	Astatotilapia_calliptera
ENSCPOG00000022687	LARP6	89	56.304	ENSAMXG00000029387	larp6a	73	55.040	Astyanax_mexicanus
ENSCPOG00000022687	LARP6	83	41.262	ENSAMXG00000036816	-	93	40.534	Astyanax_mexicanus
ENSCPOG00000022687	LARP6	100	88.641	ENSBTAG00000003915	LARP6	100	88.641	Bos_taurus
ENSCPOG00000022687	LARP6	100	90.061	ENSCJAG00000046236	-	100	90.061	Callithrix_jacchus
ENSCPOG00000022687	LARP6	100	90.467	ENSCJAG00000018642	-	100	90.467	Callithrix_jacchus
ENSCPOG00000022687	LARP6	86	90.802	ENSCAFG00000017616	LARP6	99	90.802	Canis_familiaris
ENSCPOG00000022687	LARP6	100	87.627	ENSCAFG00020007296	LARP6	100	88.641	Canis_lupus_dingo
ENSCPOG00000022687	LARP6	100	87.830	ENSCHIG00000013742	LARP6	100	87.830	Capra_hircus
ENSCPOG00000022687	LARP6	86	89.623	ENSTSYG00000028124	LARP6	87	89.623	Carlito_syrichta
ENSCPOG00000022687	LARP6	86	99.529	ENSCAPG00000015452	LARP6	100	99.529	Cavia_aperea
ENSCPOG00000022687	LARP6	100	90.264	ENSCCAG00000036320	LARP6	100	90.264	Cebus_capucinus
ENSCPOG00000022687	LARP6	100	90.061	ENSCATG00000042432	LARP6	100	90.061	Cercocebus_atys
ENSCPOG00000022687	LARP6	100	94.726	ENSCLAG00000007893	LARP6	100	94.726	Chinchilla_lanigera
ENSCPOG00000022687	LARP6	100	90.467	ENSCSAG00000013672	LARP6	100	90.467	Chlorocebus_sabaeus
ENSCPOG00000022687	LARP6	97	89.727	ENSCHOG00000003318	LARP6	100	89.727	Choloepus_hoffmanni
ENSCPOG00000022687	LARP6	89	70.183	ENSCPBG00000010771	LARP6	89	66.667	Chrysemys_picta_bellii
ENSCPOG00000022687	LARP6	86	91.509	ENSCANG00000025833	LARP6	99	91.509	Colobus_angolensis_palliatus
ENSCPOG00000022687	LARP6	100	86.815	ENSCGRG00001024472	Larp6	100	86.815	Cricetulus_griseus_chok1gshd
ENSCPOG00000022687	LARP6	100	86.815	ENSCGRG00000004527	Larp6	100	86.815	Cricetulus_griseus_crigri
ENSCPOG00000022687	LARP6	96	55.943	ENSCSEG00000011196	larp6a	70	55.738	Cynoglossus_semilaevis
ENSCPOG00000022687	LARP6	87	58.427	ENSCVAG00000009605	larp6a	69	56.008	Cyprinodon_variegatus
ENSCPOG00000022687	LARP6	87	56.696	ENSDARG00000005355	larp6a	96	59.811	Danio_rerio
ENSCPOG00000022687	LARP6	100	88.618	ENSDNOG00000042993	LARP6	100	89.837	Dasypus_novemcinctus
ENSCPOG00000022687	LARP6	100	79.596	ENSDORG00000023910	Larp6	100	79.596	Dipodomys_ordii
ENSCPOG00000022687	LARP6	79	88.000	ENSETEG00000020390	LARP6	78	85.932	Echinops_telfairi
ENSCPOG00000022687	LARP6	100	90.467	ENSEASG00005005490	LARP6	73	90.467	Equus_asinus_asinus
ENSCPOG00000022687	LARP6	100	90.264	ENSECAG00000014190	LARP6	100	90.264	Equus_caballus
ENSCPOG00000022687	LARP6	87	57.494	ENSELUG00000007341	larp6a	68	54.938	Esox_lucius
ENSCPOG00000022687	LARP6	100	89.858	ENSFCAG00000001361	LARP6	100	89.858	Felis_catus
ENSCPOG00000022687	LARP6	88	68.409	ENSFALG00000012389	LARP6	99	65.833	Ficedula_albicollis
ENSCPOG00000022687	LARP6	87	93.721	ENSFDAG00000019994	LARP6	86	92.273	Fukomys_damarensis
ENSCPOG00000022687	LARP6	87	58.202	ENSFHEG00000010312	larp6a	68	55.397	Fundulus_heteroclitus
ENSCPOG00000022687	LARP6	89	69.318	ENSGALG00000004046	LARP6	94	67.086	Gallus_gallus
ENSCPOG00000022687	LARP6	87	58.427	ENSGAFG00000009426	larp6a	68	56.212	Gambusia_affinis
ENSCPOG00000022687	LARP6	85	58.581	ENSGACG00000014622	larp6a	97	58.581	Gasterosteus_aculeatus
ENSCPOG00000022687	LARP6	90	66.216	ENSGAGG00000010802	LARP6	64	67.342	Gopherus_agassizii
ENSCPOG00000022687	LARP6	86	91.509	ENSGGOG00000024151	LARP6	99	91.509	Gorilla_gorilla
ENSCPOG00000022687	LARP6	97	55.936	ENSHBUG00000021014	larp6a	66	55.533	Haplochromis_burtoni
ENSCPOG00000022687	LARP6	100	91.717	ENSHGLG00000015112	LARP6	100	91.717	Heterocephalus_glaber_female
ENSCPOG00000022687	LARP6	86	93.632	ENSHGLG00100013159	LARP6	99	93.632	Heterocephalus_glaber_male
ENSCPOG00000022687	LARP6	98	54.762	ENSHCOG00000001241	larp6a	92	54.910	Hippocampus_comes
ENSCPOG00000022687	LARP6	84	58.565	ENSIPUG00000010187	larp6	70	54.733	Ictalurus_punctatus
ENSCPOG00000022687	LARP6	86	38.551	ENSIPUG00000002828	-	96	35.931	Ictalurus_punctatus
ENSCPOG00000022687	LARP6	93	91.323	ENSSTOG00000024279	LARP6	100	91.323	Ictidomys_tridecemlineatus
ENSCPOG00000022687	LARP6	100	85.569	ENSJJAG00000011013	Larp6	100	86.207	Jaculus_jaculus
ENSCPOG00000022687	LARP6	87	58.744	ENSKMAG00000001702	larp6a	64	56.468	Kryptolebias_marmoratus
ENSCPOG00000022687	LARP6	96	53.768	ENSLBEG00000000170	larp6a	90	53.768	Labrus_bergylta
ENSCPOG00000022687	LARP6	96	63.466	ENSLACG00000018706	LARP6	89	63.466	Latimeria_chalumnae
ENSCPOG00000022687	LARP6	89	40.089	ENSLACG00000002786	-	98	44.262	Latimeria_chalumnae
ENSCPOG00000022687	LARP6	86	44.342	ENSLOCG00000008547	-	84	41.801	Lepisosteus_oculatus
ENSCPOG00000022687	LARP6	95	58.333	ENSLOCG00000014592	larp6a	69	58.958	Lepisosteus_oculatus
ENSCPOG00000022687	LARP6	91	90.828	ENSLAFG00000016343	LARP6	100	90.828	Loxodonta_africana
ENSCPOG00000022687	LARP6	91	91.778	ENSMFAG00000035507	LARP6	100	91.778	Macaca_fascicularis
ENSCPOG00000022687	LARP6	96	90.526	ENSMMUG00000004429	LARP6	98	90.526	Macaca_mulatta
ENSCPOG00000022687	LARP6	100	90.264	ENSMNEG00000045335	LARP6	100	90.264	Macaca_nemestrina
ENSCPOG00000022687	LARP6	86	91.509	ENSMLEG00000038587	LARP6	99	91.509	Mandrillus_leucophaeus
ENSCPOG00000022687	LARP6	96	55.804	ENSMAMG00000005261	larp6a	67	55.601	Mastacembelus_armatus
ENSCPOG00000022687	LARP6	97	55.936	ENSMZEG00005005774	larp6a	66	55.533	Maylandia_zebra
ENSCPOG00000022687	LARP6	85	70.142	ENSMGAG00000005077	LARP6	99	70.142	Meleagris_gallopavo
ENSCPOG00000022687	LARP6	100	86.410	ENSMAUG00000018486	Larp6	100	86.410	Mesocricetus_auratus
ENSCPOG00000022687	LARP6	100	88.415	ENSMICG00000011234	LARP6	100	88.415	Microcebus_murinus
ENSCPOG00000022687	LARP6	100	86.613	ENSMOCG00000010492	Larp6	99	87.064	Microtus_ochrogaster
ENSCPOG00000022687	LARP6	96	56.148	ENSMMOG00000016284	larp6a	92	55.328	Mola_mola
ENSCPOG00000022687	LARP6	99	73.482	ENSMODG00000009034	LARP6	96	73.441	Monodelphis_domestica
ENSCPOG00000022687	LARP6	96	56.098	ENSMALG00000014439	larp6a	90	56.122	Monopterus_albus
ENSCPOG00000022687	LARP6	99	87.885	MGP_CAROLIEiJ_G0032314	Larp6	99	87.885	Mus_caroli
ENSCPOG00000022687	LARP6	100	88.032	ENSMUSG00000034839	Larp6	100	88.032	Mus_musculus
ENSCPOG00000022687	LARP6	100	86.815	MGP_PahariEiJ_G0015180	Larp6	100	86.815	Mus_pahari
ENSCPOG00000022687	LARP6	100	87.424	MGP_SPRETEiJ_G0033452	Larp6	100	87.424	Mus_spretus
ENSCPOG00000022687	LARP6	86	89.151	ENSMPUG00000017086	LARP6	99	89.151	Mustela_putorius_furo
ENSCPOG00000022687	LARP6	100	89.655	ENSMLUG00000010319	LARP6	100	89.655	Myotis_lucifugus
ENSCPOG00000022687	LARP6	100	87.018	ENSNGAG00000014238	Larp6	100	87.018	Nannospalax_galili
ENSCPOG00000022687	LARP6	98	55.179	ENSNBRG00000008120	larp6a	93	55.000	Neolamprologus_brichardi
ENSCPOG00000022687	LARP6	100	89.249	ENSNLEG00000013691	LARP6	100	89.858	Nomascus_leucogenys
ENSCPOG00000022687	LARP6	86	74.176	ENSMEUG00000002270	LARP6	99	64.706	Notamacropus_eugenii
ENSCPOG00000022687	LARP6	71	77.778	ENSOPRG00000004868	-	99	77.778	Ochotona_princeps
ENSCPOG00000022687	LARP6	100	89.634	ENSODEG00000015958	LARP6	100	89.634	Octodon_degus
ENSCPOG00000022687	LARP6	98	55.200	ENSONIG00000002901	larp6a	93	55.020	Oreochromis_niloticus
ENSCPOG00000022687	LARP6	86	79.294	ENSOCUG00000009306	LARP6	100	79.294	Oryctolagus_cuniculus
ENSCPOG00000022687	LARP6	96	56.237	ENSORLG00000014256	larp6a	93	56.237	Oryzias_latipes
ENSCPOG00000022687	LARP6	96	56.442	ENSORLG00020019657	larp6a	68	56.442	Oryzias_latipes_hni
ENSCPOG00000022687	LARP6	96	56.237	ENSORLG00015017915	larp6a	68	56.237	Oryzias_latipes_hsok
ENSCPOG00000022687	LARP6	97	56.592	ENSOMEG00000017049	larp6a	69	56.592	Oryzias_melastigma
ENSCPOG00000022687	LARP6	100	87.830	ENSOGAG00000000522	LARP6	100	88.235	Otolemur_garnettii
ENSCPOG00000022687	LARP6	87	87.907	ENSOARG00000018750	LARP6	99	87.907	Ovis_aries
ENSCPOG00000022687	LARP6	86	91.509	ENSPPAG00000031247	LARP6	99	91.509	Pan_paniscus
ENSCPOG00000022687	LARP6	100	89.249	ENSPPRG00000011282	LARP6	100	89.249	Panthera_pardus
ENSCPOG00000022687	LARP6	86	90.802	ENSPTIG00000015318	LARP6	86	90.802	Panthera_tigris_altaica
ENSCPOG00000022687	LARP6	100	90.061	ENSPTRG00000007234	LARP6	100	90.061	Pan_troglodytes
ENSCPOG00000022687	LARP6	100	90.264	ENSPANG00000016362	LARP6	100	90.264	Papio_anubis
ENSCPOG00000022687	LARP6	95	57.083	ENSPKIG00000020103	larp6a	89	57.292	Paramormyrops_kingsleyae
ENSCPOG00000022687	LARP6	96	55.400	ENSPKIG00000004511	LARP6	71	55.400	Paramormyrops_kingsleyae
ENSCPOG00000022687	LARP6	59	81.731	ENSPSIG00000009071	LARP6	90	75.652	Pelodiscus_sinensis
ENSCPOG00000022687	LARP6	97	56.301	ENSPMGG00000006958	larp6a	94	55.894	Periophthalmus_magnuspinnatus
ENSCPOG00000022687	LARP6	100	87.221	ENSPEMG00000012909	Larp6	100	87.221	Peromyscus_maniculatus_bairdii
ENSCPOG00000022687	LARP6	99	74.343	ENSPCIG00000020765	LARP6	96	74.498	Phascolarctos_cinereus
ENSCPOG00000022687	LARP6	87	58.465	ENSPFOG00000014175	larp6a	90	56.468	Poecilia_formosa
ENSCPOG00000022687	LARP6	87	58.652	ENSPLAG00000011105	larp6a	67	56.415	Poecilia_latipinna
ENSCPOG00000022687	LARP6	87	58.652	ENSPMEG00000011085	larp6a	67	56.415	Poecilia_mexicana
ENSCPOG00000022687	LARP6	87	58.427	ENSPREG00000008067	larp6a	68	56.442	Poecilia_reticulata
ENSCPOG00000022687	LARP6	100	90.061	ENSPPYG00000006604	LARP6	100	90.061	Pongo_abelii
ENSCPOG00000022687	LARP6	65	91.018	ENSPCAG00000014197	LARP6	76	91.018	Procavia_capensis
ENSCPOG00000022687	LARP6	100	89.655	ENSPCOG00000022934	LARP6	100	89.655	Propithecus_coquereli
ENSCPOG00000022687	LARP6	100	89.452	ENSPVAG00000005618	LARP6	100	89.452	Pteropus_vampyrus
ENSCPOG00000022687	LARP6	98	55.179	ENSPNYG00000009835	larp6a	93	54.600	Pundamilia_nyererei
ENSCPOG00000022687	LARP6	89	56.455	ENSPNAG00000017966	larp6a	79	54.600	Pygocentrus_nattereri
ENSCPOG00000022687	LARP6	100	86.613	ENSRNOG00000012438	Larp6	100	86.613	Rattus_norvegicus
ENSCPOG00000022687	LARP6	98	87.835	ENSRBIG00000032902	LARP6	98	87.835	Rhinopithecus_bieti
ENSCPOG00000022687	LARP6	99	90.000	ENSRROG00000043074	LARP6	99	90.515	Rhinopithecus_roxellana
ENSCPOG00000022687	LARP6	86	91.509	ENSSBOG00000024190	LARP6	99	91.509	Saimiri_boliviensis_boliviensis
ENSCPOG00000022687	LARP6	86	74.057	ENSSHAG00000018495	LARP6	99	74.057	Sarcophilus_harrisii
ENSCPOG00000022687	LARP6	84	60.284	ENSSFOG00015023268	larp6a	90	57.292	Scleropages_formosus
ENSCPOG00000022687	LARP6	87	51.843	ENSSFOG00015002254	LARP6	93	49.793	Scleropages_formosus
ENSCPOG00000022687	LARP6	97	55.422	ENSSMAG00000009953	larp6a	68	54.819	Scophthalmus_maximus
ENSCPOG00000022687	LARP6	96	56.327	ENSSDUG00000007438	larp6a	67	55.714	Seriola_dumerili
ENSCPOG00000022687	LARP6	96	56.327	ENSSLDG00000016647	larp6a	67	55.714	Seriola_lalandi_dorsalis
ENSCPOG00000022687	LARP6	86	69.905	ENSSPUG00000011312	LARP6	99	69.905	Sphenodon_punctatus
ENSCPOG00000022687	LARP6	96	55.828	ENSSPAG00000020502	larp6a	67	55.828	Stegastes_partitus
ENSCPOG00000022687	LARP6	100	89.047	ENSSSCG00000004974	LARP6	100	89.047	Sus_scrofa
ENSCPOG00000022687	LARP6	85	69.194	ENSTGUG00000005808	LARP6	99	69.194	Taeniopygia_guttata
ENSCPOG00000022687	LARP6	96	55.738	ENSTRUG00000003151	larp6a	70	55.943	Takifugu_rubripes
ENSCPOG00000022687	LARP6	96	54.938	ENSTNIG00000011926	larp6a	94	55.301	Tetraodon_nigroviridis
ENSCPOG00000022687	LARP6	86	89.125	ENSTBEG00000015077	LARP6	99	89.125	Tupaia_belangeri
ENSCPOG00000022687	LARP6	98	79.513	ENSUAMG00000010467	LARP6	96	79.513	Ursus_americanus
ENSCPOG00000022687	LARP6	87	90.233	ENSVVUG00000015227	LARP6	96	90.233	Vulpes_vulpes
ENSCPOG00000022687	LARP6	97	64.854	ENSXETG00000020340	larp6	93	65.481	Xenopus_tropicalis
ENSCPOG00000022687	LARP6	87	58.427	ENSXCOG00000012654	larp6a	94	56.584	Xiphophorus_couchianus
ENSCPOG00000022687	LARP6	87	58.427	ENSXMAG00000021015	larp6a	65	56.212	Xiphophorus_maculatus