EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000022824 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 43993 bases
Position: chrDS562962.1:4384389-4428381
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000028012	Methyltr_RsmB-F	PF01189.17	9.7e-41	1	1
ENSCPOP00000016613	Methyltr_RsmB-F	PF01189.17	1.2e-40	1	1
ENSCPOP00000028012	Methyltransf_31	PF13847.6	1.3e-08	1	1
ENSCPOP00000016613	Methyltransf_31	PF13847.6	1.5e-08	1	1
ENSCPOP00000028012	FtsJ	PF01728.19	5.4e-07	1	1
ENSCPOP00000016613	FtsJ	PF01728.19	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045045	-	189	-	ENSCPOP00000030224	63 (aa)	-	A0A286XY58
ENSCPOT00000033204	-	1176	-	ENSCPOP00000028012	391 (aa)	-	A0A286XRU8
ENSCPOT00000021527	-	1263	-	ENSCPOP00000016613	420 (aa)	-	H0W0X5

Gene Model

Click here to download ENSCPOG00000022824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000022824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000022824	-	100	89.538	ENSCPOG00000005850	-	100	90.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000022824	-	98	74.945	ENSG00000241058	NSUN6	93	74.945	Homo_sapiens
ENSCPOG00000022824	-	97	51.429	ENSAPOG00000016126	nsun6	92	51.429	Acanthochromis_polyacanthus
ENSCPOG00000022824	-	98	75.166	ENSAMEG00000012963	NSUN6	93	75.166	Ailuropoda_melanoleuca
ENSCPOG00000022824	-	97	53.515	ENSACIG00000016632	nsun6	92	53.515	Amphilophus_citrinellus
ENSCPOG00000022824	-	92	57.447	ENSAOCG00000020920	nsun6	92	51.852	Amphiprion_ocellaris
ENSCPOG00000022824	-	92	56.915	ENSAPEG00000015212	nsun6	88	51.416	Amphiprion_percula
ENSCPOG00000022824	-	92	59.517	ENSATEG00000004585	nsun6	92	54.362	Anabas_testudineus
ENSCPOG00000022824	-	97	63.883	ENSAPLG00000013473	NSUN6	92	63.883	Anas_platyrhynchos
ENSCPOG00000022824	-	98	59.688	ENSACAG00000005626	NSUN6	97	59.513	Anolis_carolinensis
ENSCPOG00000022824	-	98	74.945	ENSANAG00000027899	NSUN6	93	74.945	Aotus_nancymaae
ENSCPOG00000022824	-	92	58.713	ENSACLG00000000803	nsun6	92	53.571	Astatotilapia_calliptera
ENSCPOG00000022824	-	98	50.000	ENSAMXG00000010451	nsun6	92	50.111	Astyanax_mexicanus
ENSCPOG00000022824	-	82	74.387	ENSBTAG00000022003	NSUN6	87	74.387	Bos_taurus
ENSCPOG00000022824	-	98	74.889	ENSCJAG00000008427	NSUN6	93	74.889	Callithrix_jacchus
ENSCPOG00000022824	-	98	74.723	ENSCAFG00000004422	NSUN6	93	74.723	Canis_familiaris
ENSCPOG00000022824	-	98	74.723	ENSCAFG00020012116	NSUN6	93	74.723	Canis_lupus_dingo
ENSCPOG00000022824	-	98	71.333	ENSCHIG00000012618	NSUN6	93	71.333	Capra_hircus
ENSCPOG00000022824	-	98	74.501	ENSTSYG00000010744	NSUN6	93	74.501	Carlito_syrichta
ENSCPOG00000022824	-	98	75.166	ENSCCAG00000036696	NSUN6	93	75.166	Cebus_capucinus
ENSCPOG00000022824	-	98	74.723	ENSCATG00000038294	NSUN6	93	74.723	Cercocebus_atys
ENSCPOG00000022824	-	100	77.024	ENSCLAG00000008092	NSUN6	93	77.024	Chinchilla_lanigera
ENSCPOG00000022824	-	98	74.723	ENSCSAG00000012571	NSUN6	93	74.723	Chlorocebus_sabaeus
ENSCPOG00000022824	-	63	65.179	ENSCHOG00000006503	-	67	65.179	Choloepus_hoffmanni
ENSCPOG00000022824	-	93	70.976	ENSCPBG00000015063	NSUN6	93	65.625	Chrysemys_picta_bellii
ENSCPOG00000022824	-	50	41.772	ENSCING00000017577	-	98	41.772	Ciona_intestinalis
ENSCPOG00000022824	-	98	75.166	ENSCANG00000033916	NSUN6	93	75.166	Colobus_angolensis_palliatus
ENSCPOG00000022824	-	99	71.262	ENSCGRG00001023166	Nsun6	93	70.925	Cricetulus_griseus_chok1gshd
ENSCPOG00000022824	-	99	71.262	ENSCGRG00000016549	Nsun6	93	70.925	Cricetulus_griseus_crigri
ENSCPOG00000022824	-	97	55.204	ENSCSEG00000000514	nsun6	93	55.204	Cynoglossus_semilaevis
ENSCPOG00000022824	-	97	51.116	ENSCVAG00000006888	nsun6	92	51.116	Cyprinodon_variegatus
ENSCPOG00000022824	-	97	51.919	ENSDARG00000103478	nsun6	93	51.919	Danio_rerio
ENSCPOG00000022824	-	98	70.222	ENSDNOG00000014162	NSUN6	93	70.222	Dasypus_novemcinctus
ENSCPOG00000022824	-	100	74.014	ENSDORG00000001962	Nsun6	94	73.961	Dipodomys_ordii
ENSCPOG00000022824	-	95	37.838	FBgn0037200	CG11109	94	40.811	Drosophila_melanogaster
ENSCPOG00000022824	-	72	69.643	ENSETEG00000020201	NSUN6	73	69.643	Echinops_telfairi
ENSCPOG00000022824	-	90	50.933	ENSEBUG00000002845	nsun6	99	48.157	Eptatretus_burgeri
ENSCPOG00000022824	-	98	76.275	ENSEASG00005019939	NSUN6	93	76.275	Equus_asinus_asinus
ENSCPOG00000022824	-	98	75.831	ENSECAG00000009221	NSUN6	93	75.831	Equus_caballus
ENSCPOG00000022824	-	84	81.250	ENSEEUG00000008356	NSUN6	83	81.250	Erinaceus_europaeus
ENSCPOG00000022824	-	97	51.991	ENSELUG00000021983	nsun6	86	51.991	Esox_lucius
ENSCPOG00000022824	-	96	75.682	ENSFCAG00000015494	NSUN6	82	75.682	Felis_catus
ENSCPOG00000022824	-	98	64.775	ENSFALG00000007398	NSUN6	93	65.022	Ficedula_albicollis
ENSCPOG00000022824	-	99	77.103	ENSFDAG00000021538	NSUN6	100	77.650	Fukomys_damarensis
ENSCPOG00000022824	-	97	54.853	ENSFHEG00000014522	nsun6	92	54.853	Fundulus_heteroclitus
ENSCPOG00000022824	-	97	50.225	ENSGMOG00000011167	nsun6	93	50.905	Gadus_morhua
ENSCPOG00000022824	-	98	63.033	ENSGALG00000008564	NSUN6	92	62.921	Gallus_gallus
ENSCPOG00000022824	-	97	56.091	ENSGAFG00000002703	nsun6	91	55.952	Gambusia_affinis
ENSCPOG00000022824	-	92	58.177	ENSGACG00000004059	nsun6	91	52.423	Gasterosteus_aculeatus
ENSCPOG00000022824	-	93	70.292	ENSGAGG00000011440	NSUN6	93	65.022	Gopherus_agassizii
ENSCPOG00000022824	-	98	74.945	ENSGGOG00000009321	NSUN6	93	74.945	Gorilla_gorilla
ENSCPOG00000022824	-	92	58.713	ENSHBUG00000009093	nsun6	92	53.571	Haplochromis_burtoni
ENSCPOG00000022824	-	100	77.948	ENSHGLG00000008085	NSUN6	93	77.948	Heterocephalus_glaber_female
ENSCPOG00000022824	-	100	77.948	ENSHGLG00100016673	NSUN6	93	77.948	Heterocephalus_glaber_male
ENSCPOG00000022824	-	97	51.802	ENSHCOG00000015758	nsun6	92	51.802	Hippocampus_comes
ENSCPOG00000022824	-	92	56.267	ENSIPUG00000006281	nsun6	92	50.552	Ictalurus_punctatus
ENSCPOG00000022824	-	100	75.109	ENSSTOG00000004317	NSUN6	93	75.109	Ictidomys_tridecemlineatus
ENSCPOG00000022824	-	93	79.683	ENSJJAG00000001860	Nsun6	87	79.683	Jaculus_jaculus
ENSCPOG00000022824	-	97	52.915	ENSKMAG00000013611	nsun6	92	52.915	Kryptolebias_marmoratus
ENSCPOG00000022824	-	97	53.915	ENSLBEG00000017133	nsun6	92	53.915	Labrus_bergylta
ENSCPOG00000022824	-	93	65.333	ENSLACG00000015374	NSUN6	92	60.586	Latimeria_chalumnae
ENSCPOG00000022824	-	97	57.743	ENSLOCG00000010862	nsun6	91	57.743	Lepisosteus_oculatus
ENSCPOG00000022824	-	98	74.222	ENSLAFG00000001485	NSUN6	93	74.222	Loxodonta_africana
ENSCPOG00000022824	-	98	75.166	ENSMFAG00000045602	NSUN6	93	75.166	Macaca_fascicularis
ENSCPOG00000022824	-	98	75.166	ENSMMUG00000007451	NSUN6	93	75.166	Macaca_mulatta
ENSCPOG00000022824	-	98	74.945	ENSMNEG00000045340	NSUN6	93	74.945	Macaca_nemestrina
ENSCPOG00000022824	-	98	74.723	ENSMLEG00000032035	NSUN6	93	74.723	Mandrillus_leucophaeus
ENSCPOG00000022824	-	97	53.691	ENSMAMG00000004915	nsun6	92	53.691	Mastacembelus_armatus
ENSCPOG00000022824	-	92	58.713	ENSMZEG00005000999	nsun6	92	53.571	Maylandia_zebra
ENSCPOG00000022824	-	100	62.877	ENSMGAG00000007427	NSUN6	93	62.555	Meleagris_gallopavo
ENSCPOG00000022824	-	100	72.271	ENSMAUG00000016025	Nsun6	93	72.271	Mesocricetus_auratus
ENSCPOG00000022824	-	98	75.391	ENSMICG00000029435	NSUN6	93	75.391	Microcebus_murinus
ENSCPOG00000022824	-	99	72.907	ENSMOCG00000009814	Nsun6	93	72.907	Microtus_ochrogaster
ENSCPOG00000022824	-	97	54.147	ENSMMOG00000004263	nsun6	92	54.147	Mola_mola
ENSCPOG00000022824	-	97	69.283	ENSMODG00000009471	NSUN6	93	69.283	Monodelphis_domestica
ENSCPOG00000022824	-	92	57.951	ENSMALG00000020340	nsun6	93	52.679	Monopterus_albus
ENSCPOG00000022824	-	100	71.397	MGP_CAROLIEiJ_G0023196	Nsun6	100	71.233	Mus_caroli
ENSCPOG00000022824	-	100	70.742	ENSMUSG00000026707	Nsun6	100	70.548	Mus_musculus
ENSCPOG00000022824	-	98	75.166	ENSMPUG00000011900	NSUN6	93	75.166	Mustela_putorius_furo
ENSCPOG00000022824	-	100	72.271	ENSMLUG00000001824	NSUN6	93	72.271	Myotis_lucifugus
ENSCPOG00000022824	-	100	72.489	ENSNGAG00000004582	Nsun6	93	72.489	Nannospalax_galili
ENSCPOG00000022824	-	98	75.166	ENSNLEG00000012680	NSUN6	93	75.166	Nomascus_leucogenys
ENSCPOG00000022824	-	83	58.580	ENSMEUG00000005251	NSUN6	87	58.580	Notamacropus_eugenii
ENSCPOG00000022824	-	77	78.125	ENSOPRG00000006008	-	67	78.125	Ochotona_princeps
ENSCPOG00000022824	-	89	76.341	ENSODEG00000010093	NSUN6	93	76.341	Octodon_degus
ENSCPOG00000022824	-	92	57.600	ENSONIG00000006038	nsun6	92	51.770	Oreochromis_niloticus
ENSCPOG00000022824	-	99	62.306	ENSOANG00000005705	NSUN6	89	62.306	Ornithorhynchus_anatinus
ENSCPOG00000022824	-	94	78.740	ENSOCUG00000014870	NSUN6	74	72.907	Oryctolagus_cuniculus
ENSCPOG00000022824	-	92	58.445	ENSORLG00000010870	nsun6	92	53.670	Oryzias_latipes
ENSCPOG00000022824	-	92	58.445	ENSORLG00020009913	nsun6	92	53.258	Oryzias_latipes_hni
ENSCPOG00000022824	-	92	58.177	ENSORLG00015009893	nsun6	92	53.034	Oryzias_latipes_hsok
ENSCPOG00000022824	-	92	58.177	ENSOMEG00000003613	nsun6	92	52.902	Oryzias_melastigma
ENSCPOG00000022824	-	98	73.778	ENSOGAG00000003925	NSUN6	93	73.778	Otolemur_garnettii
ENSCPOG00000022824	-	98	71.047	ENSOARG00000013212	NSUN6	92	71.047	Ovis_aries
ENSCPOG00000022824	-	98	74.723	ENSPPAG00000042405	NSUN6	93	74.723	Pan_paniscus
ENSCPOG00000022824	-	98	75.831	ENSPPRG00000007015	NSUN6	93	75.831	Panthera_pardus
ENSCPOG00000022824	-	98	76.053	ENSPTIG00000010890	NSUN6	93	76.053	Panthera_tigris_altaica
ENSCPOG00000022824	-	98	74.888	ENSPTRG00000002340	NSUN6	93	74.888	Pan_troglodytes
ENSCPOG00000022824	-	98	74.723	ENSPANG00000023143	NSUN6	93	74.723	Papio_anubis
ENSCPOG00000022824	-	91	57.065	ENSPKIG00000011356	nsun6	90	51.454	Paramormyrops_kingsleyae
ENSCPOG00000022824	-	93	68.700	ENSPSIG00000014756	NSUN6	93	63.677	Pelodiscus_sinensis
ENSCPOG00000022824	-	97	55.632	ENSPMGG00000002869	nsun6	92	55.632	Periophthalmus_magnuspinnatus
ENSCPOG00000022824	-	100	72.271	ENSPEMG00000023389	Nsun6	93	72.271	Peromyscus_maniculatus_bairdii
ENSCPOG00000022824	-	97	44.395	ENSPMAG00000003159	nsun6	91	44.395	Petromyzon_marinus
ENSCPOG00000022824	-	97	68.000	ENSPCIG00000008953	NSUN6	93	68.000	Phascolarctos_cinereus
ENSCPOG00000022824	-	92	57.641	ENSPFOG00000016647	nsun6	91	52.088	Poecilia_formosa
ENSCPOG00000022824	-	92	57.641	ENSPLAG00000021785	nsun6	91	51.868	Poecilia_latipinna
ENSCPOG00000022824	-	92	57.373	ENSPMEG00000022256	nsun6	91	51.868	Poecilia_mexicana
ENSCPOG00000022824	-	97	53.047	ENSPREG00000008237	nsun6	93	53.047	Poecilia_reticulata
ENSCPOG00000022824	-	98	71.556	ENSPPYG00000002131	NSUN6	93	71.556	Pongo_abelii
ENSCPOG00000022824	-	66	68.846	ENSPCAG00000014335	-	62	68.846	Procavia_capensis
ENSCPOG00000022824	-	98	66.274	ENSPCOG00000004346	NSUN6	92	66.274	Propithecus_coquereli
ENSCPOG00000022824	-	74	77.987	ENSPVAG00000006329	NSUN6	74	77.987	Pteropus_vampyrus
ENSCPOG00000022824	-	97	53.829	ENSPNYG00000000646	nsun6	92	53.829	Pundamilia_nyererei
ENSCPOG00000022824	-	97	52.434	ENSPNAG00000000807	nsun6	91	52.212	Pygocentrus_nattereri
ENSCPOG00000022824	-	100	68.750	ENSRNOG00000018520	Nsun6	93	69.231	Rattus_norvegicus
ENSCPOG00000022824	-	98	74.945	ENSRBIG00000033358	NSUN6	93	74.945	Rhinopithecus_bieti
ENSCPOG00000022824	-	98	74.945	ENSRROG00000033711	NSUN6	93	74.945	Rhinopithecus_roxellana
ENSCPOG00000022824	-	98	62.444	ENSSBOG00000036167	NSUN6	93	62.444	Saimiri_boliviensis_boliviensis
ENSCPOG00000022824	-	98	68.680	ENSSHAG00000008315	NSUN6	93	68.680	Sarcophilus_harrisii
ENSCPOG00000022824	-	97	51.535	ENSSFOG00015001941	nsun6	95	52.106	Scleropages_formosus
ENSCPOG00000022824	-	97	53.982	ENSSMAG00000011608	nsun6	92	53.982	Scophthalmus_maximus
ENSCPOG00000022824	-	92	59.517	ENSSDUG00000007541	nsun6	92	54.066	Seriola_dumerili
ENSCPOG00000022824	-	92	59.517	ENSSLDG00000021347	nsun6	92	53.846	Seriola_lalandi_dorsalis
ENSCPOG00000022824	-	76	71.951	ENSSARG00000013595	NSUN6	76	71.951	Sorex_araneus
ENSCPOG00000022824	-	93	69.231	ENSSPUG00000014085	NSUN6	93	64.798	Sphenodon_punctatus
ENSCPOG00000022824	-	92	57.641	ENSSPAG00000012441	nsun6	91	51.974	Stegastes_partitus
ENSCPOG00000022824	-	99	71.744	ENSSSCG00000011041	NSUN6	93	71.648	Sus_scrofa
ENSCPOG00000022824	-	98	65.248	ENSTGUG00000001241	NSUN6	93	66.143	Taeniopygia_guttata
ENSCPOG00000022824	-	97	48.526	ENSTRUG00000008314	nsun6	92	48.526	Takifugu_rubripes
ENSCPOG00000022824	-	93	62.963	ENSTBEG00000010815	NSUN6	93	62.963	Tupaia_belangeri
ENSCPOG00000022824	-	98	71.333	ENSTTRG00000007423	NSUN6	94	71.333	Tursiops_truncatus
ENSCPOG00000022824	-	98	75.388	ENSUMAG00000013383	NSUN6	93	75.388	Ursus_maritimus
ENSCPOG00000022824	-	58	79.104	ENSVPAG00000010144	NSUN6	59	79.104	Vicugna_pacos
ENSCPOG00000022824	-	98	74.723	ENSVVUG00000003814	NSUN6	93	74.723	Vulpes_vulpes
ENSCPOG00000022824	-	98	58.352	ENSXETG00000022762	nsun6	93	58.613	Xenopus_tropicalis
ENSCPOG00000022824	-	97	53.968	ENSXCOG00000011542	nsun6	93	53.968	Xiphophorus_couchianus
ENSCPOG00000022824	-	92	58.177	ENSXMAG00000002289	nsun6	91	52.527	Xiphophorus_maculatus