EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000023605 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1475 bases
Position: chrDS562859.1:10118682-10120156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000016965	RRM_1	PF00076.22	5.7e-32	1	2
ENSCPOP00000016965	RRM_1	PF00076.22	5.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000024244	-	1434	-	ENSCPOP00000016965	477 (aa)	-	H0W1X5

Gene Model

Click here to download ENSCPOG00000023605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000023605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000023605	-	100	71.399	ENSCPOG00000026604	-	99	71.399
ENSCPOG00000023605	-	100	88.050	ENSCPOG00000038668	-	100	88.050
ENSCPOG00000023605	-	100	97.113	ENSCPOG00000010263	-	100	97.113
ENSCPOG00000023605	-	74	67.680	ENSCPOG00000000395	PSPC1	86	70.060
ENSCPOG00000023605	-	80	87.724	ENSCPOG00000036719	-	93	87.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000023605	-	100	93.608	ENSG00000147140	NONO	100	96.859	Homo_sapiens
ENSCPOG00000023605	-	91	60.706	ENSAPOG00000023320	nono	95	62.785	Acanthochromis_polyacanthus
ENSCPOG00000023605	-	100	94.227	ENSAMEG00000016057	NONO	100	94.227	Ailuropoda_melanoleuca
ENSCPOG00000023605	-	76	70.667	ENSACIG00000019987	nono	94	65.057	Amphilophus_citrinellus
ENSCPOG00000023605	-	91	60.265	ENSAOCG00000018863	nono	95	62.069	Amphiprion_ocellaris
ENSCPOG00000023605	-	75	68.852	ENSAPEG00000011383	nono	87	71.268	Amphiprion_percula
ENSCPOG00000023605	-	86	85.782	ENSAPLG00000002642	NONO	98	86.256	Anas_platyrhynchos
ENSCPOG00000023605	-	100	80.041	ENSACAG00000015026	NONO	99	81.481	Anolis_carolinensis
ENSCPOG00000023605	-	100	93.608	ENSANAG00000033266	-	100	93.608	Aotus_nancymaae
ENSCPOG00000023605	-	81	75.258	ENSANAG00000035751	-	96	85.065	Aotus_nancymaae
ENSCPOG00000023605	-	99	72.577	ENSANAG00000027089	-	99	73.608	Aotus_nancymaae
ENSCPOG00000023605	-	72	70.248	ENSACLG00000012045	nono	91	74.927	Astatotilapia_calliptera
ENSCPOG00000023605	-	95	63.441	ENSAMXG00000033933	nono	91	64.896	Astyanax_mexicanus
ENSCPOG00000023605	-	100	92.577	ENSBTAG00000012152	NONO	100	92.990	Bos_taurus
ENSCPOG00000023605	-	100	93.608	ENSCJAG00000036744	NONO	96	99.346	Callithrix_jacchus
ENSCPOG00000023605	-	91	83.678	ENSCAFG00000030809	-	99	84.598	Canis_familiaris
ENSCPOG00000023605	-	100	94.227	ENSCAFG00000017071	NONO	100	94.227	Canis_familiaris
ENSCPOG00000023605	-	100	91.546	ENSCAFG00000003207	-	100	91.959	Canis_familiaris
ENSCPOG00000023605	-	57	83.704	ENSCAFG00000013766	-	100	71.279	Canis_familiaris
ENSCPOG00000023605	-	100	90.103	ENSCAFG00020020298	-	100	90.515	Canis_lupus_dingo
ENSCPOG00000023605	-	100	92.577	ENSCHIG00000000365	-	100	92.990	Capra_hircus
ENSCPOG00000023605	-	76	86.757	ENSCHIG00000009602	-	89	87.027	Capra_hircus
ENSCPOG00000023605	-	100	89.691	ENSTSYG00000007423	-	99	90.103	Carlito_syrichta
ENSCPOG00000023605	-	99	82.231	ENSTSYG00000036306	-	100	83.678	Carlito_syrichta
ENSCPOG00000023605	-	100	81.132	ENSTSYG00000034207	-	99	81.667	Carlito_syrichta
ENSCPOG00000023605	-	99	72.363	ENSCAPG00000002354	-	97	72.363	Cavia_aperea
ENSCPOG00000023605	-	99	76.901	ENSCAPG00000006522	-	84	76.966	Cavia_aperea
ENSCPOG00000023605	-	100	97.921	ENSCAPG00000011616	-	100	97.921	Cavia_aperea
ENSCPOG00000023605	-	100	69.102	ENSCAPG00000002723	-	100	68.894	Cavia_aperea
ENSCPOG00000023605	-	100	83.918	ENSCATG00000039509	NONO	100	84.330	Cercocebus_atys
ENSCPOG00000023605	-	100	93.402	ENSCLAG00000003642	NONO	100	93.814	Chinchilla_lanigera
ENSCPOG00000023605	-	100	79.839	ENSCPBG00000016659	NONO	100	79.839	Chrysemys_picta_bellii
ENSCPOG00000023605	-	100	93.608	ENSCANG00000025310	NONO	100	93.608	Colobus_angolensis_palliatus
ENSCPOG00000023605	-	100	92.577	ENSCGRG00001000065	Nono	100	92.990	Cricetulus_griseus_chok1gshd
ENSCPOG00000023605	-	86	96.420	ENSCGRG00000004508	Nono	100	96.420	Cricetulus_griseus_crigri
ENSCPOG00000023605	-	79	67.959	ENSCSEG00000008189	NONO	94	63.387	Cynoglossus_semilaevis
ENSCPOG00000023605	-	80	68.205	ENSCSEG00000010708	nono	90	63.616	Cynoglossus_semilaevis
ENSCPOG00000023605	-	74	69.780	ENSCVAG00000003978	nono	82	71.074	Cyprinodon_variegatus
ENSCPOG00000023605	-	89	63.554	ENSDARG00000020482	nono	87	73.451	Danio_rerio
ENSCPOG00000023605	-	62	70.805	ENSDNOG00000032215	-	99	70.847	Dasypus_novemcinctus
ENSCPOG00000023605	-	55	82.609	ENSDNOG00000031430	-	100	82.609	Dasypus_novemcinctus
ENSCPOG00000023605	-	100	91.134	ENSDORG00000009294	Nono	100	91.546	Dipodomys_ordii
ENSCPOG00000023605	-	86	96.338	ENSETEG00000013823	NONO	77	96.338	Echinops_telfairi
ENSCPOG00000023605	-	100	94.227	ENSECAG00000008502	NONO	100	94.227	Equus_caballus
ENSCPOG00000023605	-	100	90.928	ENSEEUG00000014404	NONO	100	91.340	Erinaceus_europaeus
ENSCPOG00000023605	-	97	61.123	ENSELUG00000001083	nono	93	65.315	Esox_lucius
ENSCPOG00000023605	-	100	94.227	ENSFCAG00000043511	-	100	94.227	Felis_catus
ENSCPOG00000023605	-	100	74.113	ENSFALG00000011765	NONO	100	73.695	Ficedula_albicollis
ENSCPOG00000023605	-	100	94.227	ENSFDAG00000012809	-	100	94.227	Fukomys_damarensis
ENSCPOG00000023605	-	100	77.226	ENSFDAG00000006143	-	100	77.226	Fukomys_damarensis
ENSCPOG00000023605	-	71	70.056	ENSFHEG00000009714	nono	85	69.972	Fundulus_heteroclitus
ENSCPOG00000023605	-	100	79.032	ENSGALG00000005507	NONO	100	79.435	Gallus_gallus
ENSCPOG00000023605	-	73	71.111	ENSGAFG00000011460	nono	83	72.176	Gambusia_affinis
ENSCPOG00000023605	-	79	67.089	ENSGACG00000011824	nono	94	63.470	Gasterosteus_aculeatus
ENSCPOG00000023605	-	100	81.520	ENSGAGG00000025400	-	91	81.520	Gopherus_agassizii
ENSCPOG00000023605	-	91	92.986	ENSGGOG00000006194	NONO	97	92.986	Gorilla_gorilla
ENSCPOG00000023605	-	100	82.083	ENSGGOG00000036327	-	99	83.333	Gorilla_gorilla
ENSCPOG00000023605	-	79	68.101	ENSHBUG00000010741	nono	94	65.057	Haplochromis_burtoni
ENSCPOG00000023605	-	100	93.608	ENSHGLG00000005550	NONO	100	93.814	Heterocephalus_glaber_female
ENSCPOG00000023605	-	100	93.608	ENSHGLG00100013511	NONO	100	93.814	Heterocephalus_glaber_male
ENSCPOG00000023605	-	81	67.500	ENSHCOG00000016441	nono	84	74.294	Hippocampus_comes
ENSCPOG00000023605	-	77	70.449	ENSIPUG00000018271	nono	91	63.636	Ictalurus_punctatus
ENSCPOG00000023605	-	100	94.227	ENSSTOG00000015869	NONO	100	94.227	Ictidomys_tridecemlineatus
ENSCPOG00000023605	-	100	74.793	ENSJJAG00000001971	-	100	75.732	Jaculus_jaculus
ENSCPOG00000023605	-	100	91.753	ENSJJAG00000017151	-	100	92.165	Jaculus_jaculus
ENSCPOG00000023605	-	90	61.468	ENSKMAG00000002798	nono	82	70.523	Kryptolebias_marmoratus
ENSCPOG00000023605	-	81	67.588	ENSLBEG00000022623	nono	84	72.299	Labrus_bergylta
ENSCPOG00000023605	-	81	72.864	ENSLACG00000000598	NONO	84	80.453	Latimeria_chalumnae
ENSCPOG00000023605	-	94	65.733	ENSLOCG00000014739	nono	93	68.934	Lepisosteus_oculatus
ENSCPOG00000023605	-	100	93.196	ENSLAFG00000013422	NONO	100	92.990	Loxodonta_africana
ENSCPOG00000023605	-	100	93.608	ENSMFAG00000041557	NONO	100	93.608	Macaca_fascicularis
ENSCPOG00000023605	-	78	96.859	ENSMMUG00000020481	NONO	100	96.859	Macaca_mulatta
ENSCPOG00000023605	-	100	93.608	ENSMNEG00000009698	NONO	100	93.608	Macaca_nemestrina
ENSCPOG00000023605	-	100	93.608	ENSMLEG00000042452	NONO	100	93.608	Mandrillus_leucophaeus
ENSCPOG00000023605	-	95	60.560	ENSMAMG00000007314	nono	94	63.844	Mastacembelus_armatus
ENSCPOG00000023605	-	72	70.799	ENSMZEG00005010199	nono	91	74.927	Maylandia_zebra
ENSCPOG00000023605	-	86	86.019	ENSMGAG00000008869	NONO	98	86.493	Meleagris_gallopavo
ENSCPOG00000023605	-	100	93.196	ENSMAUG00000016243	Nono	100	93.196	Mesocricetus_auratus
ENSCPOG00000023605	-	100	93.196	ENSMICG00000000232	NONO	100	93.196	Microcebus_murinus
ENSCPOG00000023605	-	100	80.713	ENSMOCG00000021293	-	100	80.417	Microtus_ochrogaster
ENSCPOG00000023605	-	100	73.196	ENSMOCG00000020099	-	95	74.433	Microtus_ochrogaster
ENSCPOG00000023605	-	90	95.862	ENSMOCG00000005532	-	96	96.520	Microtus_ochrogaster
ENSCPOG00000023605	-	83	66.667	ENSMMOG00000015503	nono	85	64.977	Mola_mola
ENSCPOG00000023605	-	89	89.401	ENSMODG00000004445	NONO	99	89.791	Monodelphis_domestica
ENSCPOG00000023605	-	79	66.667	ENSMALG00000001310	nono	87	70.799	Monopterus_albus
ENSCPOG00000023605	-	100	92.990	ENSMUSG00000031311	Nono	100	92.990	Mus_musculus
ENSCPOG00000023605	-	100	93.196	MGP_PahariEiJ_G0031826	Nono	100	92.990	Mus_pahari
ENSCPOG00000023605	-	100	94.227	ENSMPUG00000004937	NONO	100	94.227	Mustela_putorius_furo
ENSCPOG00000023605	-	100	92.371	ENSMLUG00000002489	NONO	89	92.784	Myotis_lucifugus
ENSCPOG00000023605	-	100	93.196	ENSNGAG00000010857	Nono	100	93.196	Nannospalax_galili
ENSCPOG00000023605	-	79	68.354	ENSNBRG00000017083	nono	94	65.287	Neolamprologus_brichardi
ENSCPOG00000023605	-	100	89.897	ENSNLEG00000001278	NONO	100	96.859	Nomascus_leucogenys
ENSCPOG00000023605	-	100	78.763	ENSMEUG00000004294	NONO	100	79.175	Notamacropus_eugenii
ENSCPOG00000023605	-	57	100.000	ENSOPRG00000001139	-	69	100.000	Ochotona_princeps
ENSCPOG00000023605	-	97	66.161	ENSODEG00000004982	-	99	64.935	Octodon_degus
ENSCPOG00000023605	-	100	86.804	ENSODEG00000002994	-	100	86.804	Octodon_degus
ENSCPOG00000023605	-	100	86.186	ENSODEG00000002224	-	100	87.010	Octodon_degus
ENSCPOG00000023605	-	88	66.276	ENSODEG00000000530	-	89	65.661	Octodon_degus
ENSCPOG00000023605	-	86	69.762	ENSODEG00000011878	-	100	64.330	Octodon_degus
ENSCPOG00000023605	-	76	70.933	ENSONIG00000020497	nono	94	65.057	Oreochromis_niloticus
ENSCPOG00000023605	-	99	87.860	ENSOCUG00000021848	-	90	96.253	Oryctolagus_cuniculus
ENSCPOG00000023605	-	99	57.292	ENSOCUG00000024801	-	97	57.620	Oryctolagus_cuniculus
ENSCPOG00000023605	-	78	65.473	ENSORLG00000012801	nono	83	69.146	Oryzias_latipes
ENSCPOG00000023605	-	71	70.520	ENSORLG00020003761	nono	78	71.676	Oryzias_latipes_hni
ENSCPOG00000023605	-	78	65.473	ENSORLG00015018033	nono	83	69.146	Oryzias_latipes_hsok
ENSCPOG00000023605	-	86	61.033	ENSOMEG00000012702	nono	82	70.833	Oryzias_melastigma
ENSCPOG00000023605	-	100	93.004	ENSOGAG00000004834	NONO	100	92.798	Otolemur_garnettii
ENSCPOG00000023605	-	100	92.371	ENSOARG00000016966	NONO	99	92.784	Ovis_aries
ENSCPOG00000023605	-	100	93.608	ENSPPAG00000032487	NONO	100	93.608	Pan_paniscus
ENSCPOG00000023605	-	100	81.649	ENSPPAG00000041394	-	99	82.680	Pan_paniscus
ENSCPOG00000023605	-	100	94.227	ENSPPRG00000024537	-	100	94.227	Panthera_pardus
ENSCPOG00000023605	-	100	94.021	ENSPTIG00000016068	-	100	94.021	Panthera_tigris_altaica
ENSCPOG00000023605	-	100	93.608	ENSPTRG00000022010	NONO	100	93.608	Pan_troglodytes
ENSCPOG00000023605	-	100	81.443	ENSPTRG00000051228	-	100	82.474	Pan_troglodytes
ENSCPOG00000023605	-	100	93.608	ENSPANG00000013979	NONO	100	93.608	Papio_anubis
ENSCPOG00000023605	-	100	67.944	ENSPANG00000035017	-	99	68.145	Papio_anubis
ENSCPOG00000023605	-	91	63.596	ENSPKIG00000019475	-	91	78.652	Paramormyrops_kingsleyae
ENSCPOG00000023605	-	92	64.565	ENSPKIG00000014500	nono	93	68.046	Paramormyrops_kingsleyae
ENSCPOG00000023605	-	100	81.109	ENSPSIG00000010678	NONO	99	81.314	Pelodiscus_sinensis
ENSCPOG00000023605	-	77	66.580	ENSPMGG00000023030	nono	82	71.074	Periophthalmus_magnuspinnatus
ENSCPOG00000023605	-	100	92.577	ENSPEMG00000011150	Nono	100	92.990	Peromyscus_maniculatus_bairdii
ENSCPOG00000023605	-	100	83.539	ENSPCIG00000026515	NONO	100	83.951	Phascolarctos_cinereus
ENSCPOG00000023605	-	73	69.886	ENSPFOG00000016436	nono	82	69.577	Poecilia_formosa
ENSCPOG00000023605	-	73	69.444	ENSPLAG00000017492	nono	82	70.523	Poecilia_latipinna
ENSCPOG00000023605	-	77	67.282	ENSPMEG00000021530	nono	83	70.799	Poecilia_mexicana
ENSCPOG00000023605	-	84	64.078	ENSPREG00000010014	nono	82	71.350	Poecilia_reticulata
ENSCPOG00000023605	-	100	92.371	ENSPPYG00000020451	NONO	100	92.784	Pongo_abelii
ENSCPOG00000023605	-	100	92.577	ENSPCAG00000002541	NONO	100	93.196	Procavia_capensis
ENSCPOG00000023605	-	100	94.227	ENSPCOG00000008197	NONO	100	94.227	Propithecus_coquereli
ENSCPOG00000023605	-	100	91.753	ENSPVAG00000016503	NONO	100	92.165	Pteropus_vampyrus
ENSCPOG00000023605	-	95	61.538	ENSPNAG00000008232	nono	82	63.532	Pygocentrus_nattereri
ENSCPOG00000023605	-	100	93.402	ENSRNOG00000003689	Nono	100	93.196	Rattus_norvegicus
ENSCPOG00000023605	-	75	96.721	ENSRBIG00000037966	NONO	100	96.721	Rhinopithecus_bieti
ENSCPOG00000023605	-	100	92.577	ENSRROG00000043203	NONO	100	92.990	Rhinopithecus_roxellana
ENSCPOG00000023605	-	100	89.072	ENSSBOG00000027683	-	99	89.485	Saimiri_boliviensis_boliviensis
ENSCPOG00000023605	-	100	92.577	ENSSBOG00000032772	-	100	92.990	Saimiri_boliviensis_boliviensis
ENSCPOG00000023605	-	99	74.113	ENSSBOG00000018932	-	99	73.486	Saimiri_boliviensis_boliviensis
ENSCPOG00000023605	-	100	85.979	ENSSHAG00000010195	NONO	100	86.392	Sarcophilus_harrisii
ENSCPOG00000023605	-	92	60.579	ENSSFOG00015000137	-	82	75.405	Scleropages_formosus
ENSCPOG00000023605	-	92	65.517	ENSSFOG00015008964	nono	90	77.846	Scleropages_formosus
ENSCPOG00000023605	-	95	59.785	ENSSDUG00000021886	nono	94	63.470	Seriola_dumerili
ENSCPOG00000023605	-	95	59.785	ENSSLDG00000012392	nono	94	63.470	Seriola_lalandi_dorsalis
ENSCPOG00000023605	-	100	86.392	ENSSARG00000007959	NONO	100	83.633	Sorex_araneus
ENSCPOG00000023605	-	78	83.854	ENSSPUG00000003116	NONO	100	84.375	Sphenodon_punctatus
ENSCPOG00000023605	-	91	61.148	ENSSPAG00000012663	nono	95	63.699	Stegastes_partitus
ENSCPOG00000023605	-	100	94.227	ENSSSCG00000023245	NONO	100	94.227	Sus_scrofa
ENSCPOG00000023605	-	100	80.123	ENSTGUG00000007048	NONO	100	79.918	Taeniopygia_guttata
ENSCPOG00000023605	-	78	68.831	ENSTRUG00000005554	nono	94	64.545	Takifugu_rubripes
ENSCPOG00000023605	-	100	94.227	ENSTTRG00000009605	NONO	100	94.227	Tursiops_truncatus
ENSCPOG00000023605	-	100	90.103	ENSUAMG00000008220	NONO	100	90.515	Ursus_americanus
ENSCPOG00000023605	-	100	94.227	ENSUMAG00000021550	NONO	100	94.227	Ursus_maritimus
ENSCPOG00000023605	-	100	94.227	ENSVPAG00000002272	NONO	100	94.227	Vicugna_pacos
ENSCPOG00000023605	-	100	88.525	ENSVVUG00000003390	-	100	88.934	Vulpes_vulpes
ENSCPOG00000023605	-	100	70.165	ENSXETG00000020868	nono	99	70.576	Xenopus_tropicalis
ENSCPOG00000023605	-	73	70.833	ENSXCOG00000015587	nono	83	71.901	Xiphophorus_couchianus
ENSCPOG00000023605	-	73	70.833	ENSXMAG00000019883	nono	83	71.901	Xiphophorus_maculatus