EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000023851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 3064 bases
Position: chrDS562864.1:45351929-45354992
Accession: 101787806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017043	zf-U11-48K	PF05253.12	2e-12	1	2
ENSCPOP00000017043	zf-U11-48K	PF05253.12	2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020072	-	456	XM_013159097	ENSCPOP00000017043	151 (aa)	-	H0W252

Gene Model

Click here to download ENSCPOG00000023851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000023851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000023851	-	87	50.758	ENSCPOG00000008201	GTSF1L	94	50.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000023851	-	98	75.000	ENSAMEG00000000958	-	97	75.000	Ailuropoda_melanoleuca
ENSCPOG00000023851	-	100	72.258	ENSCAFG00000006463	-	100	72.258	Canis_familiaris
ENSCPOG00000023851	-	99	72.667	ENSCAFG00020020371	-	95	72.667	Canis_lupus_dingo
ENSCPOG00000023851	-	97	82.993	ENSCLAG00000008579	-	100	82.993	Chinchilla_lanigera
ENSCPOG00000023851	-	100	66.452	ENSCGRG00001016136	Gtsf2	100	66.452	Cricetulus_griseus_chok1gshd
ENSCPOG00000023851	-	100	66.452	ENSCGRG00000012950	Gtsf2	100	66.452	Cricetulus_griseus_crigri
ENSCPOG00000023851	-	99	69.333	ENSDORG00000026087	Gtsf2	97	69.333	Dipodomys_ordii
ENSCPOG00000023851	-	70	71.028	ENSEASG00005010262	-	98	71.028	Equus_asinus_asinus
ENSCPOG00000023851	-	70	77.358	ENSECAG00000014413	-	98	77.358	Equus_caballus
ENSCPOG00000023851	-	72	73.394	ENSFCAG00000031316	-	93	73.394	Felis_catus
ENSCPOG00000023851	-	100	80.795	ENSFDAG00000019555	-	100	80.795	Fukomys_damarensis
ENSCPOG00000023851	-	95	81.818	ENSHGLG00000002798	-	97	80.000	Heterocephalus_glaber_female
ENSCPOG00000023851	-	95	81.818	ENSHGLG00100012359	-	97	80.000	Heterocephalus_glaber_male
ENSCPOG00000023851	-	99	70.667	ENSSTOG00000030158	-	99	70.667	Ictidomys_tridecemlineatus
ENSCPOG00000023851	-	100	66.452	ENSJJAG00000016320	Gtsf2	100	66.452	Jaculus_jaculus
ENSCPOG00000023851	-	98	66.216	ENSMAUG00000017189	-	91	66.216	Mesocricetus_auratus
ENSCPOG00000023851	-	56	69.048	ENSMAUG00000014687	-	92	69.048	Mesocricetus_auratus
ENSCPOG00000023851	-	100	67.097	ENSMOCG00000014770	Gtsf2	100	67.097	Microtus_ochrogaster
ENSCPOG00000023851	-	100	65.806	MGP_CAROLIEiJ_G0020380	Gtsf2	100	65.806	Mus_caroli
ENSCPOG00000023851	-	100	65.161	ENSMUSG00000053508	Gtsf2	100	65.161	Mus_musculus
ENSCPOG00000023851	-	100	65.161	MGP_PahariEiJ_G0020379	Gtsf2	100	65.161	Mus_pahari
ENSCPOG00000023851	-	100	65.161	MGP_SPRETEiJ_G0021273	Gtsf2	100	65.161	Mus_spretus
ENSCPOG00000023851	-	100	73.548	ENSMPUG00000005664	-	100	73.548	Mustela_putorius_furo
ENSCPOG00000023851	-	100	61.935	ENSNGAG00000008752	Gtsf2	100	61.935	Nannospalax_galili
ENSCPOG00000023851	-	99	78.000	ENSODEG00000013228	-	100	78.000	Octodon_degus
ENSCPOG00000023851	-	84	75.591	ENSPPRG00000004157	-	99	75.591	Panthera_pardus
ENSCPOG00000023851	-	84	75.591	ENSPTIG00000020670	-	99	75.591	Panthera_tigris_altaica
ENSCPOG00000023851	-	100	69.032	ENSPEMG00000010828	-	100	69.032	Peromyscus_maniculatus_bairdii
ENSCPOG00000023851	-	100	65.563	ENSPEMG00000014641	-	100	65.563	Peromyscus_maniculatus_bairdii
ENSCPOG00000023851	-	100	65.161	ENSRNOG00000036830	RGD1563200	100	65.161	Rattus_norvegicus
ENSCPOG00000023851	-	99	59.333	ENSSSCG00000000296	-	90	59.333	Sus_scrofa
ENSCPOG00000023851	-	70	80.189	ENSUAMG00000021668	-	97	80.189	Ursus_americanus
ENSCPOG00000023851	-	70	80.189	ENSUMAG00000011281	-	97	80.189	Ursus_maritimus
ENSCPOG00000023851	-	70	79.245	ENSVVUG00000023684	-	97	79.245	Vulpes_vulpes