EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000024278 (Gene tree)
Gene ID: 100729133
Gene Symbol: SON
Alias: BASS1|C21orf50|DBP-5|FLJ21099|FLJ33914|KIAA1019|NREBP
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 31953 bases
Position: chrDS563001.1:2354794-2386746
Accession: 100729133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000032872	dsrm	PF00035.26	2.4e-10	1	1
ENSCPOP00000032872	DND1_DSRM	PF14709.7	4.7e-12	1	1
ENSCPOP00000020061	DND1_DSRM	PF14709.7	1.3e-08	1	1
ENSCPOP00000020061	G-patch	PF01585.23	2.2e-16	1	1
ENSCPOP00000032872	G-patch	PF01585.23	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000028224	SON-202	1365	-	ENSCPOP00000020061	454 (aa)	-	H0WAP8
ENSCPOT00000023463	SON-203	6381	-	ENSCPOP00000015376	2126 (aa)	-	H0VXE6
ENSCPOT00000034820	SON-201	7666	XM_013141834	ENSCPOP00000032872	2282 (aa)	XP_012997288	A0A286Y4W4

Gene Model

Click here to download ENSCPOG00000024278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000024278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000024278	SON	100	98.928	ENSG00000159140	SON	100	98.018	Homo_sapiens
ENSCPOG00000024278	SON	100	99.732	ENSAMEG00000014868	SON	79	98.916	Ailuropoda_melanoleuca
ENSCPOG00000024278	SON	69	51.220	ENSACIG00000017870	-	94	64.356	Amphilophus_citrinellus
ENSCPOG00000024278	SON	72	51.801	ENSATEG00000012732	-	53	51.801	Anabas_testudineus
ENSCPOG00000024278	SON	93	73.113	ENSAPLG00000008908	-	99	76.098	Anas_platyrhynchos
ENSCPOG00000024278	SON	99	72.848	ENSACAG00000004681	-	96	77.871	Anolis_carolinensis
ENSCPOG00000024278	SON	100	100.000	ENSANAG00000035426	SON	100	98.899	Aotus_nancymaae
ENSCPOG00000024278	SON	78	49.304	ENSACLG00000007098	-	88	51.497	Astatotilapia_calliptera
ENSCPOG00000024278	SON	81	98.444	ENSBTAG00000008482	SON	78	99.512	Bos_taurus
ENSCPOG00000024278	SON	100	98.458	ENSCJAG00000046975	SON	100	98.458	Callithrix_jacchus
ENSCPOG00000024278	SON	100	99.732	ENSCAFG00000032306	-	79	98.916	Canis_familiaris
ENSCPOG00000024278	SON	100	99.732	ENSCAFG00000009106	-	79	98.916	Canis_familiaris
ENSCPOG00000024278	SON	100	98.899	ENSCAFG00020025305	SON	100	98.899	Canis_lupus_dingo
ENSCPOG00000024278	SON	100	99.464	ENSCHIG00000022392	SON	79	98.645	Capra_hircus
ENSCPOG00000024278	SON	100	99.464	ENSTSYG00000008371	SON	100	98.018	Carlito_syrichta
ENSCPOG00000024278	SON	91	95.311	ENSCAPG00000017011	SON	96	95.311	Cavia_aperea
ENSCPOG00000024278	SON	100	100.000	ENSCCAG00000030234	SON	100	98.899	Cebus_capucinus
ENSCPOG00000024278	SON	100	100.000	ENSCATG00000029812	SON	100	98.899	Cercocebus_atys
ENSCPOG00000024278	SON	100	99.780	ENSCLAG00000011776	SON	100	99.780	Chinchilla_lanigera
ENSCPOG00000024278	SON	80	99.178	ENSCSAG00000009823	SON	63	100.000	Chlorocebus_sabaeus
ENSCPOG00000024278	SON	81	40.751	ENSCING00000007049	-	86	43.164	Ciona_intestinalis
ENSCPOG00000024278	SON	100	100.000	ENSCANG00000025986	SON	100	98.899	Colobus_angolensis_palliatus
ENSCPOG00000024278	SON	100	98.678	ENSCGRG00001016220	Son	100	98.678	Cricetulus_griseus_chok1gshd
ENSCPOG00000024278	SON	94	98.598	ENSCGRG00000015260	Son	100	98.598	Cricetulus_griseus_crigri
ENSCPOG00000024278	SON	98	98.630	ENSDNOG00000036246	SON	71	81.789	Dasypus_novemcinctus
ENSCPOG00000024278	SON	100	99.780	ENSDORG00000028617	-	100	99.780	Dipodomys_ordii
ENSCPOG00000024278	SON	79	98.326	ENSETEG00000019427	SON	78	98.326	Echinops_telfairi
ENSCPOG00000024278	SON	71	98.454	ENSEEUG00000002352	SON	68	98.454	Erinaceus_europaeus
ENSCPOG00000024278	SON	72	51.482	ENSELUG00000003878	-	78	59.928	Esox_lucius
ENSCPOG00000024278	SON	100	98.678	ENSFCAG00000028680	-	100	98.678	Felis_catus
ENSCPOG00000024278	SON	96	71.364	ENSFALG00000002365	-	100	74.390	Ficedula_albicollis
ENSCPOG00000024278	SON	100	99.339	ENSFDAG00000019128	SON	100	99.339	Fukomys_damarensis
ENSCPOG00000024278	SON	98	72.523	ENSGALG00000052354	-	99	75.758	Gallus_gallus
ENSCPOG00000024278	SON	100	98.899	ENSGGOG00000010481	SON	100	98.899	Gorilla_gorilla
ENSCPOG00000024278	SON	100	99.559	ENSHGLG00000010432	SON	100	99.559	Heterocephalus_glaber_female
ENSCPOG00000024278	SON	84	100.000	ENSHGLG00100014915	SON	81	100.000	Heterocephalus_glaber_male
ENSCPOG00000024278	SON	100	99.559	ENSSTOG00000020593	SON	100	99.559	Ictidomys_tridecemlineatus
ENSCPOG00000024278	SON	100	99.559	ENSJJAG00000013491	-	100	99.559	Jaculus_jaculus
ENSCPOG00000024278	SON	98	65.714	ENSLACG00000013385	-	99	70.631	Latimeria_chalumnae
ENSCPOG00000024278	SON	80	66.027	ENSLOCG00000011021	-	75	65.842	Lepisosteus_oculatus
ENSCPOG00000024278	SON	100	99.465	ENSLAFG00000016307	SON	73	98.421	Loxodonta_africana
ENSCPOG00000024278	SON	100	100.000	ENSMFAG00000034427	SON	100	98.899	Macaca_fascicularis
ENSCPOG00000024278	SON	100	98.899	ENSMMUG00000005511	SON	100	98.899	Macaca_mulatta
ENSCPOG00000024278	SON	100	100.000	ENSMNEG00000031671	SON	100	98.899	Macaca_nemestrina
ENSCPOG00000024278	SON	100	100.000	ENSMLEG00000035039	SON	100	98.899	Mandrillus_leucophaeus
ENSCPOG00000024278	SON	80	71.351	ENSMGAG00000014526	-	94	72.289	Meleagris_gallopavo
ENSCPOG00000024278	SON	100	98.899	ENSMAUG00000002086	-	100	98.899	Mesocricetus_auratus
ENSCPOG00000024278	SON	100	99.732	ENSMICG00000033920	SON	100	98.458	Microcebus_murinus
ENSCPOG00000024278	SON	100	98.238	ENSMOCG00000012860	-	100	98.238	Microtus_ochrogaster
ENSCPOG00000024278	SON	100	98.660	ENSMODG00000021061	SON	80	97.832	Monodelphis_domestica
ENSCPOG00000024278	SON	75	51.989	ENSMALG00000006263	-	91	53.106	Monopterus_albus
ENSCPOG00000024278	SON	100	99.464	MGP_CAROLIEiJ_G0020965	Son	100	99.119	Mus_caroli
ENSCPOG00000024278	SON	100	99.464	ENSMUSG00000022961	Son	100	98.899	Mus_musculus
ENSCPOG00000024278	SON	100	99.464	MGP_PahariEiJ_G0016670	Son	100	98.899	Mus_pahari
ENSCPOG00000024278	SON	100	99.464	MGP_SPRETEiJ_G0021871	Son	100	98.899	Mus_spretus
ENSCPOG00000024278	SON	98	98.904	ENSMPUG00000001290	SON	80	99.756	Mustela_putorius_furo
ENSCPOG00000024278	SON	100	99.196	ENSMLUG00000002449	SON	79	98.374	Myotis_lucifugus
ENSCPOG00000024278	SON	100	98.899	ENSNGAG00000000062	-	100	98.899	Nannospalax_galili
ENSCPOG00000024278	SON	100	100.000	ENSNLEG00000004002	SON	100	98.899	Nomascus_leucogenys
ENSCPOG00000024278	SON	100	98.123	ENSOPRG00000005068	SON	80	98.626	Ochotona_princeps
ENSCPOG00000024278	SON	100	99.339	ENSODEG00000003658	-	100	99.339	Octodon_degus
ENSCPOG00000024278	SON	81	56.522	ENSONIG00000003775	-	79	57.393	Oreochromis_niloticus
ENSCPOG00000024278	SON	99	100.000	ENSOCUG00000003867	SON	79	99.187	Oryctolagus_cuniculus
ENSCPOG00000024278	SON	90	46.860	ENSORLG00020014016	-	91	47.101	Oryzias_latipes_hni
ENSCPOG00000024278	SON	94	50.234	ENSORLG00015016415	-	78	50.234	Oryzias_latipes_hsok
ENSCPOG00000024278	SON	82	99.656	ENSOGAG00000027319	SON	79	99.661	Otolemur_garnettii
ENSCPOG00000024278	SON	98	98.630	ENSOARG00000013038	SON	80	99.512	Ovis_aries
ENSCPOG00000024278	SON	100	98.899	ENSPPAG00000033712	SON	100	98.899	Pan_paniscus
ENSCPOG00000024278	SON	100	99.732	ENSPPRG00000019353	SON	100	98.678	Panthera_pardus
ENSCPOG00000024278	SON	100	99.732	ENSPTIG00000017100	SON	100	98.678	Panthera_tigris_altaica
ENSCPOG00000024278	SON	100	98.899	ENSPTRG00000052356	-	100	100.000	Pan_troglodytes
ENSCPOG00000024278	SON	100	100.000	ENSPTRG00000013872	SON	100	98.899	Pan_troglodytes
ENSCPOG00000024278	SON	100	100.000	ENSPANG00000024077	SON	100	98.899	Papio_anubis
ENSCPOG00000024278	SON	96	73.077	ENSPSIG00000008097	-	100	77.317	Pelodiscus_sinensis
ENSCPOG00000024278	SON	80	55.495	ENSPMGG00000015598	-	93	51.807	Periophthalmus_magnuspinnatus
ENSCPOG00000024278	SON	100	96.696	ENSPCIG00000012884	-	100	96.696	Phascolarctos_cinereus
ENSCPOG00000024278	SON	98	99.178	ENSPPYG00000011380	SON	80	100.000	Pongo_abelii
ENSCPOG00000024278	SON	82	98.969	ENSPCAG00000010170	SON	78	98.983	Procavia_capensis
ENSCPOG00000024278	SON	100	99.732	ENSPCOG00000015502	SON	100	98.458	Propithecus_coquereli
ENSCPOG00000024278	SON	100	98.391	ENSPVAG00000011186	SON	75	98.901	Pteropus_vampyrus
ENSCPOG00000024278	SON	100	99.464	ENSRNOG00000002021	Son	80	98.645	Rattus_norvegicus
ENSCPOG00000024278	SON	100	98.899	ENSRBIG00000044269	-	100	100.000	Rhinopithecus_bieti
ENSCPOG00000024278	SON	100	100.000	ENSRROG00000042156	SON	100	98.899	Rhinopithecus_roxellana
ENSCPOG00000024278	SON	100	100.000	ENSSBOG00000020885	SON	100	98.899	Saimiri_boliviensis_boliviensis
ENSCPOG00000024278	SON	100	90.885	ENSSHAG00000008266	SON	100	91.707	Sarcophilus_harrisii
ENSCPOG00000024278	SON	100	95.756	ENSSARG00000012369	SON	74	95.330	Sorex_araneus
ENSCPOG00000024278	SON	100	99.464	ENSSSCG00000023674	SON	79	98.645	Sus_scrofa
ENSCPOG00000024278	SON	95	69.932	ENSTGUG00000000486	-	100	72.927	Taeniopygia_guttata
ENSCPOG00000024278	SON	98	52.980	ENSTNIG00000014468	-	98	52.980	Tetraodon_nigroviridis
ENSCPOG00000024278	SON	80	99.507	ENSTBEG00000003193	SON	74	99.517	Tupaia_belangeri
ENSCPOG00000024278	SON	94	98.182	ENSTTRG00000004692	SON	69	99.476	Tursiops_truncatus
ENSCPOG00000024278	SON	99	96.757	ENSUAMG00000015025	SON	80	99.171	Ursus_americanus
ENSCPOG00000024278	SON	100	99.732	ENSUMAG00000020052	SON	81	98.916	Ursus_maritimus
ENSCPOG00000024278	SON	94	95.710	ENSVPAG00000009150	SON	63	96.154	Vicugna_pacos
ENSCPOG00000024278	SON	98	97.534	ENSVVUG00000022974	SON	81	98.537	Vulpes_vulpes
ENSCPOG00000024278	SON	80	71.739	ENSXETG00000014115	son	93	69.100	Xenopus_tropicalis