EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000024304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 753 bases
Position: chrDS562886.1:12354189-12354941
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021986	MRP-L47	PF06984.13	4.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000028365	-	675	-	ENSCPOP00000021986	224 (aa)	-	A0A286X977

Gene Model

Click here to download ENSCPOG00000024304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000024304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000024304	-	100	79.283	ENSCPOG00000002312	-	100	79.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000024304	-	100	71.600	ENSG00000136522	MRPL47	100	71.600	Homo_sapiens
ENSCPOG00000024304	-	83	55.276	ENSAPOG00000014123	mrpl47	76	55.276	Acanthochromis_polyacanthus
ENSCPOG00000024304	-	99	71.315	ENSAMEG00000010876	MRPL47	99	71.315	Ailuropoda_melanoleuca
ENSCPOG00000024304	-	99	48.047	ENSACIG00000012703	mrpl47	99	48.047	Amphilophus_citrinellus
ENSCPOG00000024304	-	83	55.779	ENSAOCG00000008347	mrpl47	76	55.779	Amphiprion_ocellaris
ENSCPOG00000024304	-	83	55.779	ENSAPEG00000005830	mrpl47	76	55.779	Amphiprion_percula
ENSCPOG00000024304	-	99	51.362	ENSATEG00000009838	mrpl47	99	51.362	Anabas_testudineus
ENSCPOG00000024304	-	84	58.706	ENSAPLG00000011793	MRPL47	97	58.706	Anas_platyrhynchos
ENSCPOG00000024304	-	67	58.385	ENSACAG00000004517	MRPL47	95	58.385	Anolis_carolinensis
ENSCPOG00000024304	-	99	66.250	ENSANAG00000037296	-	96	67.089	Aotus_nancymaae
ENSCPOG00000024304	-	99	63.525	ENSANAG00000029476	-	96	64.315	Aotus_nancymaae
ENSCPOG00000024304	-	98	49.793	ENSACLG00000019621	mrpl47	97	49.793	Astatotilapia_calliptera
ENSCPOG00000024304	-	79	55.556	ENSAMXG00000011888	mrpl47	96	47.083	Astyanax_mexicanus
ENSCPOG00000024304	-	98	73.251	ENSBTAG00000002462	MRPL47	96	73.251	Bos_taurus
ENSCPOG00000024304	-	75	32.447	WBGene00015092	mrpl-47	84	32.447	Caenorhabditis_elegans
ENSCPOG00000024304	-	98	72.199	ENSCJAG00000013028	-	96	72.199	Callithrix_jacchus
ENSCPOG00000024304	-	97	71.130	ENSCJAG00000014820	-	95	71.130	Callithrix_jacchus
ENSCPOG00000024304	-	99	72.358	ENSCAFG00000011380	MRPL47	98	72.358	Canis_familiaris
ENSCPOG00000024304	-	99	72.358	ENSCAFG00020023127	MRPL47	98	72.358	Canis_lupus_dingo
ENSCPOG00000024304	-	99	72.764	ENSCHIG00000013922	MRPL47	98	72.764	Capra_hircus
ENSCPOG00000024304	-	99	72.691	ENSTSYG00000001541	-	99	72.691	Carlito_syrichta
ENSCPOG00000024304	-	99	65.737	ENSTSYG00000032115	-	99	70.046	Carlito_syrichta
ENSCPOG00000024304	-	99	71.721	ENSCCAG00000037348	MRPL47	96	72.614	Cebus_capucinus
ENSCPOG00000024304	-	100	64.583	ENSCATG00000029931	-	100	64.583	Cercocebus_atys
ENSCPOG00000024304	-	100	69.200	ENSCATG00000020336	-	100	69.200	Cercocebus_atys
ENSCPOG00000024304	-	100	74.000	ENSCLAG00000017678	-	100	74.400	Chinchilla_lanigera
ENSCPOG00000024304	-	100	73.810	ENSCLAG00000015039	-	100	73.810	Chinchilla_lanigera
ENSCPOG00000024304	-	100	73.600	ENSCLAG00000017681	-	100	74.000	Chinchilla_lanigera
ENSCPOG00000024304	-	99	73.361	ENSCSAG00000013046	-	98	73.361	Chlorocebus_sabaeus
ENSCPOG00000024304	-	100	67.600	ENSCSAG00000010884	-	100	67.600	Chlorocebus_sabaeus
ENSCPOG00000024304	-	99	58.577	ENSCPBG00000026934	MRPL47	98	58.577	Chrysemys_picta_bellii
ENSCPOG00000024304	-	75	40.110	ENSCING00000001800	-	65	40.110	Ciona_intestinalis
ENSCPOG00000024304	-	100	57.983	ENSCANG00000041627	MRPL47	100	57.983	Colobus_angolensis_palliatus
ENSCPOG00000024304	-	98	74.274	ENSCGRG00001015111	Mrpl47	96	74.274	Cricetulus_griseus_chok1gshd
ENSCPOG00000024304	-	98	74.274	ENSCGRG00000017426	Mrpl47	96	74.274	Cricetulus_griseus_crigri
ENSCPOG00000024304	-	99	45.238	ENSCSEG00000013581	mrpl47	97	45.238	Cynoglossus_semilaevis
ENSCPOG00000024304	-	83	56.853	ENSCVAG00000007629	mrpl47	76	56.853	Cyprinodon_variegatus
ENSCPOG00000024304	-	78	56.452	ENSDARG00000075743	mrpl47	75	56.452	Danio_rerio
ENSCPOG00000024304	-	99	68.504	ENSDNOG00000015052	MRPL47	99	68.504	Dasypus_novemcinctus
ENSCPOG00000024304	-	96	70.485	ENSDORG00000007650	Mrpl47	97	70.485	Dipodomys_ordii
ENSCPOG00000024304	-	59	40.278	FBgn0014023	mRpL47	53	40.278	Drosophila_melanogaster
ENSCPOG00000024304	-	99	67.480	ENSETEG00000019362	MRPL47	97	67.480	Echinops_telfairi
ENSCPOG00000024304	-	77	54.839	ENSEBUG00000014208	mrpl47	75	54.839	Eptatretus_burgeri
ENSCPOG00000024304	-	100	73.016	ENSEASG00005016858	MRPL47	100	73.016	Equus_asinus_asinus
ENSCPOG00000024304	-	100	73.600	ENSECAG00000018545	MRPL47	100	74.000	Equus_caballus
ENSCPOG00000024304	-	70	65.116	ENSEEUG00000012255	MRPL47	68	65.116	Erinaceus_europaeus
ENSCPOG00000024304	-	98	49.402	ENSELUG00000004619	mrpl47	97	49.402	Esox_lucius
ENSCPOG00000024304	-	97	73.640	ENSFCAG00000039093	MRPL47	96	73.640	Felis_catus
ENSCPOG00000024304	-	86	55.610	ENSFALG00000008365	MRPL47	96	55.610	Ficedula_albicollis
ENSCPOG00000024304	-	99	74.699	ENSFDAG00000014402	MRPL47	99	74.699	Fukomys_damarensis
ENSCPOG00000024304	-	98	49.804	ENSFHEG00000007456	mrpl47	96	49.804	Fundulus_heteroclitus
ENSCPOG00000024304	-	97	50.218	ENSGMOG00000017332	mrpl47	99	50.218	Gadus_morhua
ENSCPOG00000024304	-	94	51.073	ENSGALG00000013759	MRPL47	96	50.833	Gallus_gallus
ENSCPOG00000024304	-	98	47.451	ENSGAFG00000013445	mrpl47	98	47.451	Gambusia_affinis
ENSCPOG00000024304	-	95	51.965	ENSGACG00000009992	mrpl47	97	51.965	Gasterosteus_aculeatus
ENSCPOG00000024304	-	96	57.563	ENSGAGG00000016462	MRPL47	98	57.563	Gopherus_agassizii
ENSCPOG00000024304	-	100	72.000	ENSGGOG00000027171	MRPL47	99	76.147	Gorilla_gorilla
ENSCPOG00000024304	-	98	49.801	ENSHBUG00000022567	mrpl47	94	49.801	Haplochromis_burtoni
ENSCPOG00000024304	-	99	70.281	ENSHGLG00000012776	-	100	70.281	Heterocephalus_glaber_female
ENSCPOG00000024304	-	100	76.800	ENSHGLG00000013945	MRPL47	100	78.000	Heterocephalus_glaber_female
ENSCPOG00000024304	-	99	66.265	ENSHGLG00100018544	-	100	66.265	Heterocephalus_glaber_male
ENSCPOG00000024304	-	100	76.800	ENSHGLG00100003873	MRPL47	100	78.000	Heterocephalus_glaber_male
ENSCPOG00000024304	-	83	54.315	ENSHCOG00000018946	mrpl47	76	54.315	Hippocampus_comes
ENSCPOG00000024304	-	78	56.150	ENSIPUG00000009200	mrpl47	97	47.581	Ictalurus_punctatus
ENSCPOG00000024304	-	97	71.488	ENSJJAG00000020002	Mrpl47	96	71.488	Jaculus_jaculus
ENSCPOG00000024304	-	98	48.996	ENSKMAG00000022044	mrpl47	98	48.996	Kryptolebias_marmoratus
ENSCPOG00000024304	-	99	49.219	ENSLBEG00000027302	mrpl47	88	49.219	Labrus_bergylta
ENSCPOG00000024304	-	98	47.036	ENSLACG00000014781	MRPL47	98	47.036	Latimeria_chalumnae
ENSCPOG00000024304	-	97	50.202	ENSLOCG00000001289	mrpl47	98	50.202	Lepisosteus_oculatus
ENSCPOG00000024304	-	99	70.120	ENSLAFG00000018470	MRPL47	99	70.120	Loxodonta_africana
ENSCPOG00000024304	-	90	76.606	ENSMFAG00000000293	MRPL47	99	76.606	Macaca_fascicularis
ENSCPOG00000024304	-	90	72.018	ENSMFAG00000039679	-	98	72.018	Macaca_fascicularis
ENSCPOG00000024304	-	100	72.400	ENSMMUG00000009744	MRPL47	100	72.400	Macaca_mulatta
ENSCPOG00000024304	-	100	62.400	ENSMNEG00000043074	-	98	65.138	Macaca_nemestrina
ENSCPOG00000024304	-	100	72.400	ENSMNEG00000001870	-	99	76.606	Macaca_nemestrina
ENSCPOG00000024304	-	90	74.312	ENSMLEG00000036668	-	98	74.312	Mandrillus_leucophaeus
ENSCPOG00000024304	-	100	60.800	ENSMLEG00000035312	-	100	60.800	Mandrillus_leucophaeus
ENSCPOG00000024304	-	98	50.820	ENSMAMG00000006129	mrpl47	84	50.820	Mastacembelus_armatus
ENSCPOG00000024304	-	98	48.606	ENSMZEG00005002155	mrpl47	97	48.606	Maylandia_zebra
ENSCPOG00000024304	-	98	70.539	ENSMAUG00000010772	Mrpl47	96	70.539	Mesocricetus_auratus
ENSCPOG00000024304	-	100	68.651	ENSMICG00000049377	MRPL47	100	68.651	Microcebus_murinus
ENSCPOG00000024304	-	98	57.676	ENSMOCG00000001968	-	94	57.676	Microtus_ochrogaster
ENSCPOG00000024304	-	98	72.840	ENSMOCG00000007933	-	96	72.840	Microtus_ochrogaster
ENSCPOG00000024304	-	94	53.604	ENSMMOG00000019550	mrpl47	95	53.604	Mola_mola
ENSCPOG00000024304	-	89	64.929	ENSMODG00000021301	MRPL47	94	64.929	Monodelphis_domestica
ENSCPOG00000024304	-	98	49.794	ENSMALG00000017640	mrpl47	91	49.794	Monopterus_albus
ENSCPOG00000024304	-	98	70.782	MGP_CAROLIEiJ_G0024921	Mrpl47	96	70.782	Mus_caroli
ENSCPOG00000024304	-	98	70.782	ENSMUSG00000037531	Mrpl47	96	70.782	Mus_musculus
ENSCPOG00000024304	-	98	70.370	MGP_PahariEiJ_G0026366	Mrpl47	96	70.370	Mus_pahari
ENSCPOG00000024304	-	98	70.782	MGP_SPRETEiJ_G0025855	Mrpl47	96	70.782	Mus_spretus
ENSCPOG00000024304	-	100	71.429	ENSMPUG00000017214	MRPL47	100	71.429	Mustela_putorius_furo
ENSCPOG00000024304	-	100	69.685	ENSMLUG00000000996	MRPL47	100	69.685	Myotis_lucifugus
ENSCPOG00000024304	-	99	70.492	ENSNGAG00000022354	Mrpl47	98	70.492	Nannospalax_galili
ENSCPOG00000024304	-	99	48.828	ENSNBRG00000004178	mrpl47	99	48.828	Neolamprologus_brichardi
ENSCPOG00000024304	-	99	48.828	ENSNBRG00000017251	mrpl47	99	48.828	Neolamprologus_brichardi
ENSCPOG00000024304	-	100	70.833	ENSNLEG00000005831	MRPL47	99	76.147	Nomascus_leucogenys
ENSCPOG00000024304	-	83	61.809	ENSMEUG00000012649	-	96	61.809	Notamacropus_eugenii
ENSCPOG00000024304	-	85	63.636	ENSOPRG00000007831	MRPL47	100	63.636	Ochotona_princeps
ENSCPOG00000024304	-	99	65.385	ENSODEG00000002762	-	97	65.385	Octodon_degus
ENSCPOG00000024304	-	99	70.082	ENSODEG00000017632	-	98	70.082	Octodon_degus
ENSCPOG00000024304	-	99	49.609	ENSONIG00000001683	mrpl47	99	49.609	Oreochromis_niloticus
ENSCPOG00000024304	-	87	61.353	ENSOANG00000002136	-	84	61.353	Ornithorhynchus_anatinus
ENSCPOG00000024304	-	100	69.323	ENSOCUG00000017886	MRPL47	100	69.323	Oryctolagus_cuniculus
ENSCPOG00000024304	-	93	49.794	ENSORLG00000023413	mrpl47	98	50.397	Oryzias_latipes
ENSCPOG00000024304	-	93	51.029	ENSORLG00020021449	mrpl47	98	50.794	Oryzias_latipes_hni
ENSCPOG00000024304	-	93	51.029	ENSORLG00015018692	mrpl47	98	51.190	Oryzias_latipes_hsok
ENSCPOG00000024304	-	97	49.606	ENSOMEG00000014147	mrpl47	98	49.606	Oryzias_melastigma
ENSCPOG00000024304	-	99	70.683	ENSOGAG00000016957	MRPL47	99	70.683	Otolemur_garnettii
ENSCPOG00000024304	-	99	72.764	ENSOARG00000020692	MRPL47	97	72.764	Ovis_aries
ENSCPOG00000024304	-	100	71.600	ENSPPAG00000028033	MRPL47	99	75.688	Pan_paniscus
ENSCPOG00000024304	-	97	74.059	ENSPPRG00000000050	MRPL47	96	74.059	Panthera_pardus
ENSCPOG00000024304	-	97	73.029	ENSPTIG00000007879	MRPL47	96	73.029	Panthera_tigris_altaica
ENSCPOG00000024304	-	100	71.600	ENSPTRG00000015648	MRPL47	99	75.688	Pan_troglodytes
ENSCPOG00000024304	-	100	72.400	ENSPANG00000008191	MRPL47	99	76.606	Papio_anubis
ENSCPOG00000024304	-	99	49.597	ENSPKIG00000012608	mrpl47	95	49.597	Paramormyrops_kingsleyae
ENSCPOG00000024304	-	91	60.465	ENSPSIG00000011536	MRPL47	90	60.465	Pelodiscus_sinensis
ENSCPOG00000024304	-	82	54.359	ENSPMAG00000001838	mrpl47	77	54.359	Petromyzon_marinus
ENSCPOG00000024304	-	85	58.621	ENSPCIG00000026899	-	76	58.621	Phascolarctos_cinereus
ENSCPOG00000024304	-	98	63.636	ENSPCIG00000006780	-	98	63.636	Phascolarctos_cinereus
ENSCPOG00000024304	-	83	54.315	ENSPFOG00000014965	mrpl47	76	54.315	Poecilia_formosa
ENSCPOG00000024304	-	98	47.059	ENSPLAG00000011483	mrpl47	98	47.059	Poecilia_latipinna
ENSCPOG00000024304	-	83	54.315	ENSPMEG00000012490	mrpl47	76	54.315	Poecilia_mexicana
ENSCPOG00000024304	-	98	47.451	ENSPREG00000015080	mrpl47	98	47.451	Poecilia_reticulata
ENSCPOG00000024304	-	100	71.200	ENSPPYG00000014321	MRPL47	100	71.200	Pongo_abelii
ENSCPOG00000024304	-	89	74.074	ENSPCAG00000016517	MRPL47	99	74.074	Procavia_capensis
ENSCPOG00000024304	-	100	71.200	ENSPCOG00000019367	MRPL47	100	71.600	Propithecus_coquereli
ENSCPOG00000024304	-	99	71.084	ENSPVAG00000004284	MRPL47	99	71.084	Pteropus_vampyrus
ENSCPOG00000024304	-	98	49.402	ENSPNYG00000005479	mrpl47	97	49.402	Pundamilia_nyererei
ENSCPOG00000024304	-	79	58.730	ENSPNAG00000026692	mrpl47	95	50.000	Pygocentrus_nattereri
ENSCPOG00000024304	-	98	69.136	ENSRNOG00000011639	Mrpl47	96	69.136	Rattus_norvegicus
ENSCPOG00000024304	-	94	74.138	ENSRBIG00000030725	MRPL47	99	74.138	Rhinopithecus_bieti
ENSCPOG00000024304	-	100	72.800	ENSRROG00000034003	MRPL47	99	77.064	Rhinopithecus_roxellana
ENSCPOG00000024304	-	99	70.492	ENSSBOG00000018241	MRPL47	96	71.369	Saimiri_boliviensis_boliviensis
ENSCPOG00000024304	-	98	61.475	ENSSHAG00000017273	MRPL47	99	61.475	Sarcophilus_harrisii
ENSCPOG00000024304	-	80	57.292	ENSSFOG00015017849	mrpl47	72	57.292	Scleropages_formosus
ENSCPOG00000024304	-	83	57.286	ENSSMAG00000003013	mrpl47	73	57.286	Scophthalmus_maximus
ENSCPOG00000024304	-	99	49.206	ENSSDUG00000003140	mrpl47	97	49.206	Seriola_dumerili
ENSCPOG00000024304	-	99	49.206	ENSSLDG00000017795	mrpl47	97	49.206	Seriola_lalandi_dorsalis
ENSCPOG00000024304	-	97	65.145	ENSSARG00000006898	-	96	65.145	Sorex_araneus
ENSCPOG00000024304	-	97	49.167	ENSSPUG00000014635	MRPL47	99	49.167	Sphenodon_punctatus
ENSCPOG00000024304	-	99	44.788	ENSSPAG00000002660	mrpl47	98	44.788	Stegastes_partitus
ENSCPOG00000024304	-	99	70.325	ENSSSCG00000011763	MRPL47	98	70.325	Sus_scrofa
ENSCPOG00000024304	-	87	55.340	ENSTGUG00000010649	-	96	55.340	Taeniopygia_guttata
ENSCPOG00000024304	-	67	52.795	ENSTGUG00000014708	-	99	52.795	Taeniopygia_guttata
ENSCPOG00000024304	-	99	42.683	ENSTRUG00000017597	mrpl47	98	42.683	Takifugu_rubripes
ENSCPOG00000024304	-	85	55.941	ENSTNIG00000015545	mrpl47	91	55.941	Tetraodon_nigroviridis
ENSCPOG00000024304	-	89	59.809	ENSTBEG00000004852	-	97	59.809	Tupaia_belangeri
ENSCPOG00000024304	-	100	66.400	ENSTTRG00000008909	MRPL47	100	66.400	Tursiops_truncatus
ENSCPOG00000024304	-	90	78.341	ENSUAMG00000007563	MRPL47	98	78.341	Ursus_americanus
ENSCPOG00000024304	-	100	72.222	ENSUMAG00000007554	MRPL47	100	72.222	Ursus_maritimus
ENSCPOG00000024304	-	100	72.400	ENSVPAG00000006633	MRPL47	100	72.400	Vicugna_pacos
ENSCPOG00000024304	-	99	72.358	ENSVVUG00000004837	MRPL47	98	72.358	Vulpes_vulpes
ENSCPOG00000024304	-	53	49.618	ENSXETG00000029930	MRPL47	97	49.618	Xenopus_tropicalis
ENSCPOG00000024304	-	83	54.315	ENSXCOG00000002915	mrpl47	76	54.315	Xiphophorus_couchianus
ENSCPOG00000024304	-	83	54.315	ENSXMAG00000018249	mrpl47	76	54.315	Xiphophorus_maculatus