EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000024477 (Gene tree)
Gene ID: 100716234
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 34999 bases
Position: chrDS562935.1:6552748-6587746
Accession: 100716234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022181	DUF1604	PF07713.13	6.6e-36	1	1
ENSCPOP00000018310	DUF1604	PF07713.13	5.4e-06	1	1
ENSCPOP00000018310	G-patch	PF01585.23	2.5e-07	1	1
ENSCPOP00000022181	G-patch	PF01585.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000032802	GPATCH1-201	3423	XM_013146922	ENSCPOP00000022181	930 (aa)	XP_013002376	A0A286X9R8
ENSCPOT00000021212	GPATCH1-202	2556	-	ENSCPOP00000018310	851 (aa)	-	H0W5Q6

Gene Model

Click here to download ENSCPOG00000024477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000024477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000024477	GPATCH1	100	81.944	ENSG00000076650	GPATCH1	100	81.303	Homo_sapiens
ENSCPOG00000024477	GPATCH1	100	83.209	ENSAMEG00000015575	GPATCH1	100	82.567	Ailuropoda_melanoleuca
ENSCPOG00000024477	GPATCH1	81	67.416	ENSAOCG00000006668	gpatch1	99	48.571	Amphiprion_ocellaris
ENSCPOG00000024477	GPATCH1	81	54.759	ENSAPEG00000000026	gpatch1	80	54.156	Amphiprion_percula
ENSCPOG00000024477	GPATCH1	81	52.381	ENSATEG00000014494	gpatch1	99	47.513	Anabas_testudineus
ENSCPOG00000024477	GPATCH1	93	58.685	ENSAPLG00000007584	GPATCH1	96	58.830	Anas_platyrhynchos
ENSCPOG00000024477	GPATCH1	100	80.021	ENSANAG00000027002	GPATCH1	100	81.624	Aotus_nancymaae
ENSCPOG00000024477	GPATCH1	81	53.257	ENSACLG00000024740	gpatch1	79	53.129	Astatotilapia_calliptera
ENSCPOG00000024477	GPATCH1	90	51.698	ENSAMXG00000020177	gpatch1	78	51.635	Astyanax_mexicanus
ENSCPOG00000024477	GPATCH1	91	82.629	ENSBTAG00000000721	GPATCH1	100	81.497	Bos_taurus
ENSCPOG00000024477	GPATCH1	68	30.967	WBGene00011109	R07E5.1	68	31.024	Caenorhabditis_elegans
ENSCPOG00000024477	GPATCH1	100	79.915	ENSCJAG00000000684	GPATCH1	100	81.517	Callithrix_jacchus
ENSCPOG00000024477	GPATCH1	100	82.196	ENSCAFG00000007457	GPATCH1	84	81.450	Canis_familiaris
ENSCPOG00000024477	GPATCH1	94	82.594	ENSCAFG00020019731	GPATCH1	91	82.009	Canis_lupus_dingo
ENSCPOG00000024477	GPATCH1	99	82.829	ENSCHIG00000019626	GPATCH1	100	82.032	Capra_hircus
ENSCPOG00000024477	GPATCH1	100	97.892	ENSCAPG00000008827	GPATCH1	100	94.493	Cavia_aperea
ENSCPOG00000024477	GPATCH1	100	79.274	ENSCCAG00000024676	GPATCH1	100	81.303	Cebus_capucinus
ENSCPOG00000024477	GPATCH1	100	82.265	ENSCATG00000043637	GPATCH1	100	81.517	Cercocebus_atys
ENSCPOG00000024477	GPATCH1	99	86.998	ENSCLAG00000003395	-	100	88.354	Chinchilla_lanigera
ENSCPOG00000024477	GPATCH1	100	79.829	ENSCSAG00000004743	GPATCH1	100	79.189	Chlorocebus_sabaeus
ENSCPOG00000024477	GPATCH1	100	70.104	ENSCHOG00000012865	GPATCH1	100	70.358	Choloepus_hoffmanni
ENSCPOG00000024477	GPATCH1	88	61.528	ENSCPBG00000000666	GPATCH1	92	66.667	Chrysemys_picta_bellii
ENSCPOG00000024477	GPATCH1	66	34.615	ENSCING00000012518	-	99	32.995	Ciona_intestinalis
ENSCPOG00000024477	GPATCH1	89	88.122	ENSCANG00000012540	GPATCH1	96	88.122	Colobus_angolensis_palliatus
ENSCPOG00000024477	GPATCH1	100	77.906	ENSCGRG00001016736	Gpatch1	100	79.780	Cricetulus_griseus_chok1gshd
ENSCPOG00000024477	GPATCH1	95	64.916	ENSCGRG00000005069	Gpatch1	91	65.521	Cricetulus_griseus_crigri
ENSCPOG00000024477	GPATCH1	81	49.689	ENSCSEG00000019456	-	85	62.727	Cynoglossus_semilaevis
ENSCPOG00000024477	GPATCH1	93	48.734	ENSDARG00000033418	gpatch1	73	50.069	Danio_rerio
ENSCPOG00000024477	GPATCH1	91	82.021	ENSDNOG00000005291	GPATCH1	95	80.729	Dasypus_novemcinctus
ENSCPOG00000024477	GPATCH1	94	75.371	ENSDORG00000012546	Gpatch1	95	75.410	Dipodomys_ordii
ENSCPOG00000024477	GPATCH1	82	32.317	FBgn0036386	CG8833	66	33.526	Drosophila_melanogaster
ENSCPOG00000024477	GPATCH1	99	72.432	ENSETEG00000003626	GPATCH1	92	72.033	Echinops_telfairi
ENSCPOG00000024477	GPATCH1	94	36.692	ENSEBUG00000011286	gpatch1	92	37.727	Eptatretus_burgeri
ENSCPOG00000024477	GPATCH1	91	82.214	ENSEASG00005021162	GPATCH1	93	82.814	Equus_asinus_asinus
ENSCPOG00000024477	GPATCH1	94	82.192	ENSECAG00000022743	GPATCH1	88	81.829	Equus_caballus
ENSCPOG00000024477	GPATCH1	73	78.431	ENSEEUG00000012925	GPATCH1	72	78.392	Erinaceus_europaeus
ENSCPOG00000024477	GPATCH1	99	48.615	ENSELUG00000018195	gpatch1	80	52.532	Esox_lucius
ENSCPOG00000024477	GPATCH1	100	81.390	ENSFCAG00000014917	GPATCH1	100	80.963	Felis_catus
ENSCPOG00000024477	GPATCH1	99	61.905	ENSFALG00000007821	GPATCH1	89	62.574	Ficedula_albicollis
ENSCPOG00000024477	GPATCH1	99	82.304	ENSFDAG00000003871	GPATCH1	100	82.647	Fukomys_damarensis
ENSCPOG00000024477	GPATCH1	75	52.459	ENSGMOG00000003830	gpatch1	88	51.508	Gadus_morhua
ENSCPOG00000024477	GPATCH1	93	62.514	ENSGALG00000004839	GPATCH1	94	63.097	Gallus_gallus
ENSCPOG00000024477	GPATCH1	81	50.845	ENSGACG00000017544	gpatch1	84	50.845	Gasterosteus_aculeatus
ENSCPOG00000024477	GPATCH1	99	62.698	ENSGAGG00000010067	GPATCH1	99	62.908	Gopherus_agassizii
ENSCPOG00000024477	GPATCH1	100	80.046	ENSGGOG00000010862	GPATCH1	100	81.449	Gorilla_gorilla
ENSCPOG00000024477	GPATCH1	81	52.971	ENSHBUG00000023462	gpatch1	80	52.971	Haplochromis_burtoni
ENSCPOG00000024477	GPATCH1	100	86.066	ENSHGLG00000009334	GPATCH1	100	85.531	Heterocephalus_glaber_female
ENSCPOG00000024477	GPATCH1	100	86.174	ENSHGLG00100018074	GPATCH1	100	85.638	Heterocephalus_glaber_male
ENSCPOG00000024477	GPATCH1	92	50.493	ENSIPUG00000014977	gpatch1	81	53.485	Ictalurus_punctatus
ENSCPOG00000024477	GPATCH1	100	82.799	ENSSTOG00000003720	GPATCH1	100	81.624	Ictidomys_tridecemlineatus
ENSCPOG00000024477	GPATCH1	91	80.751	ENSJJAG00000023765	Gpatch1	99	79.828	Jaculus_jaculus
ENSCPOG00000024477	GPATCH1	89	48.045	ENSKMAG00000017950	gpatch1	89	50.757	Kryptolebias_marmoratus
ENSCPOG00000024477	GPATCH1	80	50.275	ENSLBEG00000026527	gpatch1	91	48.704	Labrus_bergylta
ENSCPOG00000024477	GPATCH1	89	56.218	ENSLACG00000008130	GPATCH1	89	56.851	Latimeria_chalumnae
ENSCPOG00000024477	GPATCH1	81	57.198	ENSLOCG00000001800	gpatch1	81	57.069	Lepisosteus_oculatus
ENSCPOG00000024477	GPATCH1	99	81.887	ENSLAFG00000013589	GPATCH1	100	81.283	Loxodonta_africana
ENSCPOG00000024477	GPATCH1	91	82.901	ENSMFAG00000034418	GPATCH1	96	82.193	Macaca_fascicularis
ENSCPOG00000024477	GPATCH1	100	81.857	ENSMMUG00000011790	GPATCH1	100	81.217	Macaca_mulatta
ENSCPOG00000024477	GPATCH1	100	81.410	ENSMNEG00000045084	GPATCH1	100	80.769	Macaca_nemestrina
ENSCPOG00000024477	GPATCH1	100	73.434	ENSMLEG00000043840	GPATCH1	100	70.940	Mandrillus_leucophaeus
ENSCPOG00000024477	GPATCH1	81	53.257	ENSMZEG00005001926	gpatch1	80	53.129	Maylandia_zebra
ENSCPOG00000024477	GPATCH1	90	62.720	ENSMGAG00000005775	GPATCH1	89	63.139	Meleagris_gallopavo
ENSCPOG00000024477	GPATCH1	90	74.794	ENSMICG00000004829	GPATCH1	93	74.122	Microcebus_murinus
ENSCPOG00000024477	GPATCH1	99	80.579	ENSMOCG00000000174	Gpatch1	92	81.119	Microtus_ochrogaster
ENSCPOG00000024477	GPATCH1	92	45.355	ENSMMOG00000002140	gpatch1	87	51.403	Mola_mola
ENSCPOG00000024477	GPATCH1	91	70.452	ENSMODG00000012226	GPATCH1	100	69.706	Monodelphis_domestica
ENSCPOG00000024477	GPATCH1	99	44.507	ENSMALG00000014386	gpatch1	91	49.145	Monopterus_albus
ENSCPOG00000024477	GPATCH1	100	80.535	ENSMUSG00000063808	Gpatch1	100	90.816	Mus_musculus
ENSCPOG00000024477	GPATCH1	100	80.149	MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	Mus_pahari
ENSCPOG00000024477	GPATCH1	100	80.214	MGP_SPRETEiJ_G0030681	Gpatch1	100	91.837	Mus_spretus
ENSCPOG00000024477	GPATCH1	100	81.925	ENSMPUG00000007658	GPATCH1	100	81.711	Mustela_putorius_furo
ENSCPOG00000024477	GPATCH1	100	82.139	ENSMLUG00000012161	GPATCH1	100	81.390	Myotis_lucifugus
ENSCPOG00000024477	GPATCH1	100	80.963	ENSNGAG00000012455	Gpatch1	100	78.503	Nannospalax_galili
ENSCPOG00000024477	GPATCH1	100	82.372	ENSNLEG00000007659	GPATCH1	100	81.624	Nomascus_leucogenys
ENSCPOG00000024477	GPATCH1	76	70.898	ENSMEUG00000015174	GPATCH1	78	66.437	Notamacropus_eugenii
ENSCPOG00000024477	GPATCH1	99	86.510	ENSODEG00000007103	GPATCH1	99	86.081	Octodon_degus
ENSCPOG00000024477	GPATCH1	90	52.169	ENSONIG00000003302	gpatch1	91	52.286	Oreochromis_niloticus
ENSCPOG00000024477	GPATCH1	99	67.631	ENSOANG00000012732	GPATCH1	99	67.417	Ornithorhynchus_anatinus
ENSCPOG00000024477	GPATCH1	100	82.479	ENSOCUG00000015905	GPATCH1	100	82.227	Oryctolagus_cuniculus
ENSCPOG00000024477	GPATCH1	89	50.831	ENSORLG00000018706	gpatch1	87	50.952	Oryzias_latipes
ENSCPOG00000024477	GPATCH1	89	49.355	ENSOMEG00000022688	gpatch1	89	49.708	Oryzias_melastigma
ENSCPOG00000024477	GPATCH1	84	84.030	ENSOGAG00000004016	GPATCH1	96	85.658	Otolemur_garnettii
ENSCPOG00000024477	GPATCH1	90	82.604	ENSOARG00000004365	GPATCH1	99	81.466	Ovis_aries
ENSCPOG00000024477	GPATCH1	100	82.158	ENSPPAG00000020990	GPATCH1	100	81.517	Pan_paniscus
ENSCPOG00000024477	GPATCH1	100	81.497	ENSPPRG00000017245	GPATCH1	100	80.963	Panthera_pardus
ENSCPOG00000024477	GPATCH1	100	82.139	ENSPTIG00000019649	GPATCH1	100	81.711	Panthera_tigris_altaica
ENSCPOG00000024477	GPATCH1	100	82.051	ENSPTRG00000010803	GPATCH1	100	81.410	Pan_troglodytes
ENSCPOG00000024477	GPATCH1	91	82.807	ENSPANG00000012374	GPATCH1	96	82.084	Papio_anubis
ENSCPOG00000024477	GPATCH1	80	56.577	ENSPKIG00000020745	gpatch1	77	56.667	Paramormyrops_kingsleyae
ENSCPOG00000024477	GPATCH1	99	59.599	ENSPSIG00000013433	GPATCH1	99	59.873	Pelodiscus_sinensis
ENSCPOG00000024477	GPATCH1	100	79.251	ENSPEMG00000000636	Gpatch1	100	78.824	Peromyscus_maniculatus_bairdii
ENSCPOG00000024477	GPATCH1	91	72.398	ENSPCIG00000021003	GPATCH1	95	72.620	Phascolarctos_cinereus
ENSCPOG00000024477	GPATCH1	70	50.150	ENSPREG00000008264	gpatch1	97	44.783	Poecilia_reticulata
ENSCPOG00000024477	GPATCH1	100	79.274	ENSPPYG00000009824	GPATCH1	100	78.632	Pongo_abelii
ENSCPOG00000024477	GPATCH1	81	80.000	ENSPCAG00000005931	GPATCH1	85	80.420	Procavia_capensis
ENSCPOG00000024477	GPATCH1	92	77.090	ENSPCOG00000009674	GPATCH1	96	77.988	Propithecus_coquereli
ENSCPOG00000024477	GPATCH1	81	83.657	ENSPVAG00000017767	GPATCH1	90	83.657	Pteropus_vampyrus
ENSCPOG00000024477	GPATCH1	81	53.925	ENSPNYG00000018189	gpatch1	89	53.797	Pundamilia_nyererei
ENSCPOG00000024477	GPATCH1	81	54.000	ENSPNAG00000013187	gpatch1	81	53.491	Pygocentrus_nattereri
ENSCPOG00000024477	GPATCH1	100	79.679	ENSRNOG00000011584	Gpatch1	100	79.465	Rattus_norvegicus
ENSCPOG00000024477	GPATCH1	98	78.359	ENSRBIG00000034723	GPATCH1	100	71.505	Rhinopithecus_bieti
ENSCPOG00000024477	GPATCH1	100	81.838	ENSRROG00000024428	GPATCH1	100	81.197	Rhinopithecus_roxellana
ENSCPOG00000024477	GPATCH1	100	81.944	ENSSBOG00000034650	GPATCH1	100	81.303	Saimiri_boliviensis_boliviensis
ENSCPOG00000024477	GPATCH1	99	71.230	ENSSHAG00000016016	GPATCH1	99	70.551	Sarcophilus_harrisii
ENSCPOG00000024477	GPATCH1	89	51.189	ENSSFOG00015011535	gpatch1	83	54.726	Scleropages_formosus
ENSCPOG00000024477	GPATCH1	99	44.639	ENSSMAG00000002883	gpatch1	85	48.399	Scophthalmus_maximus
ENSCPOG00000024477	GPATCH1	81	52.201	ENSSDUG00000007444	gpatch1	90	49.385	Seriola_dumerili
ENSCPOG00000024477	GPATCH1	81	51.564	ENSSLDG00000002856	gpatch1	89	52.065	Seriola_lalandi_dorsalis
ENSCPOG00000024477	GPATCH1	72	84.250	ENSSARG00000004108	GPATCH1	72	84.250	Sorex_araneus
ENSCPOG00000024477	GPATCH1	91	82.981	ENSSSCG00000002865	GPATCH1	94	82.512	Sus_scrofa
ENSCPOG00000024477	GPATCH1	99	62.554	ENSTGUG00000009401	GPATCH1	92	61.672	Taeniopygia_guttata
ENSCPOG00000024477	GPATCH1	81	51.436	ENSTRUG00000005785	-	90	48.231	Takifugu_rubripes
ENSCPOG00000024477	GPATCH1	81	51.436	ENSTRUG00000025081	gpatch1	90	48.231	Takifugu_rubripes
ENSCPOG00000024477	GPATCH1	80	53.446	ENSTNIG00000002554	gpatch1	96	53.766	Tetraodon_nigroviridis
ENSCPOG00000024477	GPATCH1	62	73.750	ENSTBEG00000007750	-	83	72.705	Tupaia_belangeri
ENSCPOG00000024477	GPATCH1	91	74.503	ENSTTRG00000012221	GPATCH1	100	74.094	Tursiops_truncatus
ENSCPOG00000024477	GPATCH1	98	80.664	ENSUMAG00000014645	GPATCH1	100	80.856	Ursus_maritimus
ENSCPOG00000024477	GPATCH1	79	93.714	ENSVPAG00000010313	GPATCH1	86	94.022	Vicugna_pacos
ENSCPOG00000024477	GPATCH1	94	82.594	ENSVVUG00000016572	GPATCH1	91	82.009	Vulpes_vulpes
ENSCPOG00000024477	GPATCH1	99	50.627	ENSXETG00000018276	gpatch1	100	49.205	Xenopus_tropicalis