EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000025080 (Gene tree)
Gene ID: 100735005
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 37728 bases
Position: chrDS562880.1:26379667-26417394
Accession: 100735005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000029994	ResIII	PF04851.15	3.2e-08	1	1
ENSCPOP00000020779	ResIII	PF04851.15	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000030926	CHD5-202	5673	-	ENSCPOP00000029994	1890 (aa)	-	A0A286XXI5
ENSCPOT00000028436	CHD5-201	5784	XM_013153825	ENSCPOP00000020779	1927 (aa)	XP_013009279	H0WCQ8

Gene Model

Click here to download ENSCPOG00000025080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000025080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000025080	CHD5	94	73.056	ENSCPOG00000008504	-	96	72.472
ENSCPOG00000025080	CHD5	98	69.776	ENSCPOG00000022653	CHD3	94	69.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000025080	CHD5	99	95.374	ENSG00000116254	CHD5	99	95.381	Homo_sapiens
ENSCPOG00000025080	CHD5	99	94.496	ENSAMEG00000009880	CHD5	99	94.496	Ailuropoda_melanoleuca
ENSCPOG00000025080	CHD5	95	79.108	ENSACIG00000012582	chd5	98	79.341	Amphilophus_citrinellus
ENSCPOG00000025080	CHD5	95	80.328	ENSAOCG00000020356	chd5	90	80.230	Amphiprion_ocellaris
ENSCPOG00000025080	CHD5	96	82.141	ENSAPLG00000015475	CHD5	98	82.053	Anas_platyrhynchos
ENSCPOG00000025080	CHD5	100	82.154	ENSACAG00000002441	CHD5	99	81.846	Anolis_carolinensis
ENSCPOG00000025080	CHD5	88	95.506	ENSANAG00000001078	CHD5	91	95.506	Aotus_nancymaae
ENSCPOG00000025080	CHD5	95	75.978	ENSACLG00000003012	chd5	96	75.896	Astatotilapia_calliptera
ENSCPOG00000025080	CHD5	88	82.336	ENSAMXG00000008921	chd5	98	82.327	Astyanax_mexicanus
ENSCPOG00000025080	CHD5	94	95.820	ENSBTAG00000040477	CHD5	100	95.820	Bos_taurus
ENSCPOG00000025080	CHD5	99	95.374	ENSCJAG00000000101	CHD5	99	95.381	Callithrix_jacchus
ENSCPOG00000025080	CHD5	94	95.872	ENSCAFG00000019545	CHD5	100	95.872	Canis_familiaris
ENSCPOG00000025080	CHD5	99	95.385	ENSCAFG00020008689	CHD5	96	95.392	Canis_lupus_dingo
ENSCPOG00000025080	CHD5	99	94.130	ENSCHIG00000015027	CHD5	96	94.139	Capra_hircus
ENSCPOG00000025080	CHD5	99	90.206	ENSTSYG00000033991	CHD5	99	90.488	Carlito_syrichta
ENSCPOG00000025080	CHD5	100	99.947	ENSCAPG00000009294	CHD5	100	99.947	Cavia_aperea
ENSCPOG00000025080	CHD5	99	95.322	ENSCCAG00000024756	CHD5	99	95.330	Cebus_capucinus
ENSCPOG00000025080	CHD5	99	94.595	ENSCATG00000043011	CHD5	99	94.603	Cercocebus_atys
ENSCPOG00000025080	CHD5	100	97.725	ENSCLAG00000010589	CHD5	100	97.725	Chinchilla_lanigera
ENSCPOG00000025080	CHD5	99	95.582	ENSCSAG00000000733	CHD5	99	95.589	Chlorocebus_sabaeus
ENSCPOG00000025080	CHD5	94	90.565	ENSCPBG00000019363	CHD5	100	90.455	Chrysemys_picta_bellii
ENSCPOG00000025080	CHD5	100	95.537	ENSCANG00000032302	CHD5	99	95.537	Colobus_angolensis_palliatus
ENSCPOG00000025080	CHD5	56	96.887	ENSCGRG00001011042	Chd5	100	96.887	Cricetulus_griseus_chok1gshd
ENSCPOG00000025080	CHD5	100	94.868	ENSCGRG00000011341	Chd5	100	94.180	Cricetulus_griseus_crigri
ENSCPOG00000025080	CHD5	95	67.970	ENSDARG00000025789	chd4b	93	69.273	Danio_rerio
ENSCPOG00000025080	CHD5	98	78.526	ENSDARG00000105083	chd5	97	80.742	Danio_rerio
ENSCPOG00000025080	CHD5	100	90.815	ENSDNOG00000046342	CHD5	99	90.711	Dasypus_novemcinctus
ENSCPOG00000025080	CHD5	100	95.029	ENSDORG00000005923	Chd5	100	95.029	Dipodomys_ordii
ENSCPOG00000025080	CHD5	99	93.627	ENSEASG00005021464	CHD5	97	93.552	Equus_asinus_asinus
ENSCPOG00000025080	CHD5	99	93.309	ENSECAG00000025043	CHD5	98	95.618	Equus_caballus
ENSCPOG00000025080	CHD5	78	98.140	ENSEEUG00000002772	CHD5	77	98.140	Erinaceus_europaeus
ENSCPOG00000025080	CHD5	95	77.230	ENSELUG00000010742	chd5	95	78.226	Esox_lucius
ENSCPOG00000025080	CHD5	99	95.112	ENSFCAG00000006319	CHD5	99	95.018	Felis_catus
ENSCPOG00000025080	CHD5	99	88.062	ENSFALG00000009740	CHD5	99	87.649	Ficedula_albicollis
ENSCPOG00000025080	CHD5	99	96.468	ENSFDAG00000012881	CHD5	96	95.844	Fukomys_damarensis
ENSCPOG00000025080	CHD5	100	88.205	ENSGALG00000000747	CHD5	99	87.791	Gallus_gallus
ENSCPOG00000025080	CHD5	57	83.180	ENSGACG00000004389	chd5	93	83.333	Gasterosteus_aculeatus
ENSCPOG00000025080	CHD5	97	87.673	ENSGAGG00000001590	CHD5	99	96.098	Gopherus_agassizii
ENSCPOG00000025080	CHD5	100	95.433	ENSGGOG00000000708	CHD5	100	95.433	Gorilla_gorilla
ENSCPOG00000025080	CHD5	95	76.784	ENSHBUG00000013453	chd5	96	76.703	Haplochromis_burtoni
ENSCPOG00000025080	CHD5	100	96.931	ENSHGLG00000018184	CHD5	100	96.702	Heterocephalus_glaber_female
ENSCPOG00000025080	CHD5	100	89.995	ENSHGLG00100013261	CHD5	97	89.995	Heterocephalus_glaber_male
ENSCPOG00000025080	CHD5	95	78.791	ENSIPUG00000005446	chd5	98	79.284	Ictalurus_punctatus
ENSCPOG00000025080	CHD5	100	96.032	ENSSTOG00000002778	CHD5	100	96.032	Ictidomys_tridecemlineatus
ENSCPOG00000025080	CHD5	99	95.495	ENSJJAG00000019072	Chd5	99	94.762	Jaculus_jaculus
ENSCPOG00000025080	CHD5	98	82.895	ENSLOCG00000004944	chd5	94	82.849	Lepisosteus_oculatus
ENSCPOG00000025080	CHD5	99	95.429	ENSLAFG00000006348	CHD5	99	95.429	Loxodonta_africana
ENSCPOG00000025080	CHD5	100	95.537	ENSMFAG00000033993	CHD5	100	95.817	Macaca_fascicularis
ENSCPOG00000025080	CHD5	100	95.485	ENSMMUG00000016838	CHD5	99	95.485	Macaca_mulatta
ENSCPOG00000025080	CHD5	99	95.582	ENSMNEG00000040044	CHD5	99	95.589	Macaca_nemestrina
ENSCPOG00000025080	CHD5	100	92.115	ENSMLEG00000039166	CHD5	100	92.115	Mandrillus_leucophaeus
ENSCPOG00000025080	CHD5	90	81.692	ENSMZEG00005000841	chd5	91	81.597	Maylandia_zebra
ENSCPOG00000025080	CHD5	99	87.946	ENSMGAG00000001055	CHD5	99	87.739	Meleagris_gallopavo
ENSCPOG00000025080	CHD5	99	92.156	ENSMICG00000017862	CHD5	99	91.961	Microcebus_murinus
ENSCPOG00000025080	CHD5	99	95.077	ENSMOCG00000011049	Chd5	99	94.339	Microtus_ochrogaster
ENSCPOG00000025080	CHD5	87	80.170	ENSMODG00000006294	CHD5	78	94.111	Monodelphis_domestica
ENSCPOG00000025080	CHD5	95	79.235	ENSMALG00000002831	chd5	96	78.325	Monopterus_albus
ENSCPOG00000025080	CHD5	99	94.649	MGP_CAROLIEiJ_G0026857	Chd5	99	94.655	Mus_caroli
ENSCPOG00000025080	CHD5	99	94.500	ENSMUSG00000005045	Chd5	99	94.242	Mus_musculus
ENSCPOG00000025080	CHD5	99	94.650	MGP_PahariEiJ_G0029205	Chd5	99	94.656	Mus_pahari
ENSCPOG00000025080	CHD5	99	94.756	MGP_SPRETEiJ_G0027850	Chd5	99	94.762	Mus_spretus
ENSCPOG00000025080	CHD5	100	91.545	ENSMPUG00000007122	CHD5	99	91.545	Mustela_putorius_furo
ENSCPOG00000025080	CHD5	99	94.494	ENSNGAG00000019812	Chd5	96	94.494	Nannospalax_galili
ENSCPOG00000025080	CHD5	100	93.046	ENSNLEG00000010320	CHD5	100	92.839	Nomascus_leucogenys
ENSCPOG00000025080	CHD5	88	90.494	ENSOPRG00000004304	CHD5	87	90.494	Ochotona_princeps
ENSCPOG00000025080	CHD5	100	97.143	ENSODEG00000010262	CHD5	100	97.143	Octodon_degus
ENSCPOG00000025080	CHD5	95	79.048	ENSONIG00000000619	chd5	93	78.962	Oreochromis_niloticus
ENSCPOG00000025080	CHD5	97	73.207	ENSOANG00000001819	CHD5	98	72.354	Ornithorhynchus_anatinus
ENSCPOG00000025080	CHD5	99	93.448	ENSOGAG00000005703	CHD5	99	93.458	Otolemur_garnettii
ENSCPOG00000025080	CHD5	98	94.283	ENSOARG00000013425	CHD5	98	94.283	Ovis_aries
ENSCPOG00000025080	CHD5	100	95.332	ENSPPAG00000034048	CHD5	100	95.332	Pan_paniscus
ENSCPOG00000025080	CHD5	99	94.436	ENSPPRG00000009453	CHD5	99	94.344	Panthera_pardus
ENSCPOG00000025080	CHD5	100	87.628	ENSPTIG00000013926	CHD5	99	87.679	Panthera_tigris_altaica
ENSCPOG00000025080	CHD5	99	95.325	ENSPTRG00000000075	CHD5	99	95.332	Pan_troglodytes
ENSCPOG00000025080	CHD5	99	95.530	ENSPANG00000006765	CHD5	99	95.537	Papio_anubis
ENSCPOG00000025080	CHD5	95	79.189	ENSPKIG00000004282	chd5	98	78.470	Paramormyrops_kingsleyae
ENSCPOG00000025080	CHD5	97	82.783	ENSPSIG00000006414	CHD5	99	82.980	Pelodiscus_sinensis
ENSCPOG00000025080	CHD5	69	96.757	ENSPEMG00000014799	Chd5	100	96.757	Peromyscus_maniculatus_bairdii
ENSCPOG00000025080	CHD5	100	91.262	ENSPCIG00000028310	CHD5	97	90.848	Phascolarctos_cinereus
ENSCPOG00000025080	CHD5	95	77.486	ENSPLAG00000005343	chd5	96	77.243	Poecilia_latipinna
ENSCPOG00000025080	CHD5	100	92.164	ENSPPYG00000001952	CHD5	100	92.164	Pongo_abelii
ENSCPOG00000025080	CHD5	99	95.842	ENSPCOG00000022930	CHD5	99	95.848	Propithecus_coquereli
ENSCPOG00000025080	CHD5	95	78.277	ENSPNYG00000003183	chd5	98	78.237	Pundamilia_nyererei
ENSCPOG00000025080	CHD5	100	94.710	ENSRNOG00000011268	Chd5	99	94.032	Rattus_norvegicus
ENSCPOG00000025080	CHD5	95	96.877	ENSRBIG00000032140	CHD5	95	96.877	Rhinopithecus_bieti
ENSCPOG00000025080	CHD5	100	95.381	ENSRROG00000041146	CHD5	99	95.381	Rhinopithecus_roxellana
ENSCPOG00000025080	CHD5	100	91.041	ENSSBOG00000001955	CHD5	99	95.476	Saimiri_boliviensis_boliviensis
ENSCPOG00000025080	CHD5	98	86.220	ENSSHAG00000018641	CHD5	99	86.251	Sarcophilus_harrisii
ENSCPOG00000025080	CHD5	98	78.347	ENSSFOG00015006296	chd5	92	87.160	Scleropages_formosus
ENSCPOG00000025080	CHD5	95	78.896	ENSSDUG00000017526	chd5	98	79.973	Seriola_dumerili
ENSCPOG00000025080	CHD5	98	81.911	ENSSPUG00000010622	CHD5	98	81.088	Sphenodon_punctatus
ENSCPOG00000025080	CHD5	98	95.594	ENSSSCG00000003366	CHD5	100	95.872	Sus_scrofa
ENSCPOG00000025080	CHD5	94	84.721	ENSTGUG00000002634	-	100	84.557	Taeniopygia_guttata
ENSCPOG00000025080	CHD5	54	80.528	ENSTNIG00000004346	chd5	99	81.219	Tetraodon_nigroviridis
ENSCPOG00000025080	CHD5	99	93.869	ENSTTRG00000010468	CHD5	99	93.895	Tursiops_truncatus
ENSCPOG00000025080	CHD5	99	95.288	ENSUAMG00000024509	CHD5	98	95.288	Ursus_americanus
ENSCPOG00000025080	CHD5	99	90.257	ENSUMAG00000024173	CHD5	98	91.558	Ursus_maritimus
ENSCPOG00000025080	CHD5	99	94.341	ENSVVUG00000026480	CHD5	98	95.122	Vulpes_vulpes
ENSCPOG00000025080	CHD5	98	80.578	ENSXETG00000002904	chd5	99	79.809	Xenopus_tropicalis
ENSCPOG00000025080	CHD5	58	83.871	ENSXCOG00000014202	chd5	94	83.871	Xiphophorus_couchianus