EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000025538 (Gene tree)
Gene ID: 100722898
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 15951 bases
Position: chrDS562887.1:4813795-4829745
Accession: 100722898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000016238	MA3	PF02847.17	2.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000021957	NOM1-201	4253	XM_003469437	ENSCPOP00000016238	808 (aa)	XP_003469485	H0VZV4

Gene Model

Click here to download ENSCPOG00000025538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000025538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000025538	NOM1	96	69.102	ENSG00000146909	NOM1	95	70.863	Homo_sapiens
ENSCPOG00000025538	NOM1	61	63.962	ENSAPOG00000012073	nom1	98	51.572	Acanthochromis_polyacanthus
ENSCPOG00000025538	NOM1	81	67.877	ENSAMEG00000001412	NOM1	100	67.906	Ailuropoda_melanoleuca
ENSCPOG00000025538	NOM1	60	65.458	ENSACIG00000018050	nom1	97	52.747	Amphilophus_citrinellus
ENSCPOG00000025538	NOM1	61	63.208	ENSAOCG00000006229	nom1	98	51.769	Amphiprion_ocellaris
ENSCPOG00000025538	NOM1	61	63.019	ENSAPEG00000015994	nom1	98	51.887	Amphiprion_percula
ENSCPOG00000025538	NOM1	84	55.340	ENSATEG00000005405	nom1	98	51.578	Anabas_testudineus
ENSCPOG00000025538	NOM1	75	59.758	ENSAPLG00000006585	NOM1	99	59.488	Anas_platyrhynchos
ENSCPOG00000025538	NOM1	68	62.689	ENSACAG00000011192	NOM1	97	52.948	Anolis_carolinensis
ENSCPOG00000025538	NOM1	96	51.548	ENSACLG00000000033	nom1	98	51.519	Astatotilapia_calliptera
ENSCPOG00000025538	NOM1	85	61.494	ENSAMXG00000041486	nom1	98	49.010	Astyanax_mexicanus
ENSCPOG00000025538	NOM1	96	62.816	ENSBTAG00000016435	NOM1	98	63.765	Bos_taurus
ENSCPOG00000025538	NOM1	96	66.985	ENSCJAG00000004336	NOM1	95	68.743	Callithrix_jacchus
ENSCPOG00000025538	NOM1	54	51.889	ENSCAFG00000029845	-	93	56.173	Canis_familiaris
ENSCPOG00000025538	NOM1	97	65.114	ENSCAFG00020005121	NOM1	96	65.643	Canis_lupus_dingo
ENSCPOG00000025538	NOM1	96	62.485	ENSCHIG00000020102	NOM1	97	62.602	Capra_hircus
ENSCPOG00000025538	NOM1	96	69.428	ENSTSYG00000000227	NOM1	95	67.966	Carlito_syrichta
ENSCPOG00000025538	NOM1	60	93.295	ENSCAPG00000016273	NOM1	100	93.295	Cavia_aperea
ENSCPOG00000025538	NOM1	97	61.779	ENSCCAG00000014944	NOM1	100	85.674	Cebus_capucinus
ENSCPOG00000025538	NOM1	83	79.167	ENSCLAG00000000267	NOM1	84	79.888	Chinchilla_lanigera
ENSCPOG00000025538	NOM1	78	62.651	ENSCPBG00000018215	NOM1	87	57.355	Chrysemys_picta_bellii
ENSCPOG00000025538	NOM1	82	35.040	ENSCING00000005248	-	91	36.483	Ciona_intestinalis
ENSCPOG00000025538	NOM1	64	77.273	ENSCANG00000041984	NOM1	94	77.273	Colobus_angolensis_palliatus
ENSCPOG00000025538	NOM1	96	68.187	ENSCGRG00001020293	Nom1	96	69.388	Cricetulus_griseus_chok1gshd
ENSCPOG00000025538	NOM1	61	79.167	ENSCGRG00000005405	Nom1	99	79.167	Cricetulus_griseus_crigri
ENSCPOG00000025538	NOM1	73	55.981	ENSCSEG00000000932	nom1	94	50.062	Cynoglossus_semilaevis
ENSCPOG00000025538	NOM1	96	51.483	ENSCVAG00000007562	nom1	99	50.816	Cyprinodon_variegatus
ENSCPOG00000025538	NOM1	97	51.957	ENSDARG00000060027	nom1	99	64.389	Danio_rerio
ENSCPOG00000025538	NOM1	79	61.505	ENSDORG00000015682	Nom1	98	61.912	Dipodomys_ordii
ENSCPOG00000025538	NOM1	85	32.552	FBgn0035336	CG9004	80	34.233	Drosophila_melanogaster
ENSCPOG00000025538	NOM1	91	66.915	ENSETEG00000003104	NOM1	84	66.915	Echinops_telfairi
ENSCPOG00000025538	NOM1	97	67.888	ENSEASG00005001489	NOM1	96	68.637	Equus_asinus_asinus
ENSCPOG00000025538	NOM1	96	67.658	ENSECAG00000007596	NOM1	90	67.853	Equus_caballus
ENSCPOG00000025538	NOM1	63	62.500	ENSELUG00000006266	nom1	94	51.911	Esox_lucius
ENSCPOG00000025538	NOM1	97	62.246	ENSFCAG00000006467	NOM1	100	62.057	Felis_catus
ENSCPOG00000025538	NOM1	79	59.084	ENSFALG00000006904	NOM1	97	60.383	Ficedula_albicollis
ENSCPOG00000025538	NOM1	98	74.611	ENSFDAG00000016241	NOM1	99	75.060	Fukomys_damarensis
ENSCPOG00000025538	NOM1	96	51.957	ENSFHEG00000015974	nom1	97	52.732	Fundulus_heteroclitus
ENSCPOG00000025538	NOM1	80	52.639	ENSGMOG00000005129	nom1	99	50.062	Gadus_morhua
ENSCPOG00000025538	NOM1	83	59.046	ENSGALG00000006437	NOM1	94	54.172	Gallus_gallus
ENSCPOG00000025538	NOM1	96	51.807	ENSGAFG00000003211	nom1	99	52.123	Gambusia_affinis
ENSCPOG00000025538	NOM1	78	61.850	ENSGAGG00000014347	NOM1	96	56.832	Gopherus_agassizii
ENSCPOG00000025538	NOM1	96	67.904	ENSGGOG00000010920	NOM1	88	69.904	Gorilla_gorilla
ENSCPOG00000025538	NOM1	96	51.737	ENSHBUG00000014616	nom1	98	51.847	Haplochromis_burtoni
ENSCPOG00000025538	NOM1	97	79.167	ENSHGLG00000007392	NOM1	99	77.636	Heterocephalus_glaber_female
ENSCPOG00000025538	NOM1	97	79.167	ENSHGLG00100014407	NOM1	99	78.961	Heterocephalus_glaber_male
ENSCPOG00000025538	NOM1	90	59.707	ENSIPUG00000013980	nom1	97	50.415	Ictalurus_punctatus
ENSCPOG00000025538	NOM1	66	77.273	ENSSTOG00000031736	NOM1	100	77.273	Ictidomys_tridecemlineatus
ENSCPOG00000025538	NOM1	56	80.368	ENSJJAG00000011716	Nom1	99	80.368	Jaculus_jaculus
ENSCPOG00000025538	NOM1	85	63.498	ENSLBEG00000009252	nom1	98	49.651	Labrus_bergylta
ENSCPOG00000025538	NOM1	79	57.204	ENSLACG00000011777	NOM1	98	52.398	Latimeria_chalumnae
ENSCPOG00000025538	NOM1	96	53.550	ENSLOCG00000012452	nom1	99	53.828	Lepisosteus_oculatus
ENSCPOG00000025538	NOM1	97	61.091	ENSLAFG00000007119	NOM1	99	60.664	Loxodonta_africana
ENSCPOG00000025538	NOM1	96	65.042	ENSMMUG00000039033	NOM1	95	66.706	Macaca_mulatta
ENSCPOG00000025538	NOM1	61	79.849	ENSMLEG00000037062	NOM1	100	79.849	Mandrillus_leucophaeus
ENSCPOG00000025538	NOM1	96	49.651	ENSMAMG00000004118	nom1	99	49.536	Mastacembelus_armatus
ENSCPOG00000025538	NOM1	96	51.429	ENSMZEG00005000384	nom1	97	52.019	Maylandia_zebra
ENSCPOG00000025538	NOM1	79	60.530	ENSMGAG00000005051	NOM1	99	60.901	Meleagris_gallopavo
ENSCPOG00000025538	NOM1	96	69.444	ENSMAUG00000017988	Nom1	96	69.928	Mesocricetus_auratus
ENSCPOG00000025538	NOM1	100	65.714	ENSMICG00000017531	NOM1	100	68.005	Microcebus_murinus
ENSCPOG00000025538	NOM1	97	70.133	ENSMOCG00000015962	Nom1	96	70.144	Microtus_ochrogaster
ENSCPOG00000025538	NOM1	96	48.936	ENSMMOG00000004419	nom1	99	49.245	Mola_mola
ENSCPOG00000025538	NOM1	98	60.956	ENSMODG00000005177	NOM1	99	61.027	Monodelphis_domestica
ENSCPOG00000025538	NOM1	73	56.221	ENSMALG00000008800	nom1	97	49.380	Monopterus_albus
ENSCPOG00000025538	NOM1	98	67.381	MGP_CAROLIEiJ_G0027043	Nom1	95	68.121	Mus_caroli
ENSCPOG00000025538	NOM1	98	67.734	ENSMUSG00000001569	Nom1	95	68.856	Mus_musculus
ENSCPOG00000025538	NOM1	98	67.497	MGP_SPRETEiJ_G0028039	Nom1	95	69.016	Mus_spretus
ENSCPOG00000025538	NOM1	78	66.568	ENSMPUG00000009745	NOM1	98	67.010	Mustela_putorius_furo
ENSCPOG00000025538	NOM1	70	71.381	ENSMLUG00000009129	NOM1	99	71.381	Myotis_lucifugus
ENSCPOG00000025538	NOM1	96	52.262	ENSNBRG00000016429	nom1	94	64.381	Neolamprologus_brichardi
ENSCPOG00000025538	NOM1	96	66.627	ENSNLEG00000000238	NOM1	95	68.258	Nomascus_leucogenys
ENSCPOG00000025538	NOM1	66	63.736	ENSMEUG00000001108	NOM1	88	64.804	Notamacropus_eugenii
ENSCPOG00000025538	NOM1	86	60.145	ENSOPRG00000014676	NOM1	87	60.145	Ochotona_princeps
ENSCPOG00000025538	NOM1	80	79.340	ENSODEG00000009399	NOM1	100	80.057	Octodon_degus
ENSCPOG00000025538	NOM1	82	55.617	ENSONIG00000005958	nom1	99	52.861	Oreochromis_niloticus
ENSCPOG00000025538	NOM1	53	70.563	ENSOANG00000006139	-	97	70.563	Ornithorhynchus_anatinus
ENSCPOG00000025538	NOM1	97	69.295	ENSOCUG00000004071	-	100	68.014	Oryctolagus_cuniculus
ENSCPOG00000025538	NOM1	94	56.250	ENSOCUG00000021448	-	99	55.207	Oryctolagus_cuniculus
ENSCPOG00000025538	NOM1	77	55.233	ENSORLG00000010541	nom1	98	49.525	Oryzias_latipes
ENSCPOG00000025538	NOM1	77	55.007	ENSORLG00020010789	nom1	89	55.572	Oryzias_latipes_hni
ENSCPOG00000025538	NOM1	77	54.571	ENSORLG00015010475	nom1	97	49.167	Oryzias_latipes_hsok
ENSCPOG00000025538	NOM1	60	63.934	ENSOMEG00000004219	nom1	98	50.305	Oryzias_melastigma
ENSCPOG00000025538	NOM1	68	75.043	ENSOGAG00000001124	NOM1	99	73.476	Otolemur_garnettii
ENSCPOG00000025538	NOM1	78	67.544	ENSOARG00000007261	NOM1	97	67.036	Ovis_aries
ENSCPOG00000025538	NOM1	96	68.301	ENSPPAG00000041374	NOM1	95	70.144	Pan_paniscus
ENSCPOG00000025538	NOM1	81	67.468	ENSPTIG00000013532	NOM1	96	68.443	Panthera_tigris_altaica
ENSCPOG00000025538	NOM1	96	68.062	ENSPTRG00000019917	NOM1	95	70.024	Pan_troglodytes
ENSCPOG00000025538	NOM1	96	68.118	ENSPANG00000007605	NOM1	95	69.139	Papio_anubis
ENSCPOG00000025538	NOM1	97	49.234	ENSPKIG00000005825	nom1	97	48.921	Paramormyrops_kingsleyae
ENSCPOG00000025538	NOM1	62	67.844	ENSPSIG00000017848	NOM1	99	64.250	Pelodiscus_sinensis
ENSCPOG00000025538	NOM1	79	58.150	ENSPMGG00000002577	nom1	81	58.789	Periophthalmus_magnuspinnatus
ENSCPOG00000025538	NOM1	96	70.167	ENSPEMG00000024180	Nom1	95	71.135	Peromyscus_maniculatus_bairdii
ENSCPOG00000025538	NOM1	98	60.909	ENSPCIG00000027941	NOM1	96	61.600	Phascolarctos_cinereus
ENSCPOG00000025538	NOM1	96	51.179	ENSPFOG00000015771	nom1	98	52.061	Poecilia_formosa
ENSCPOG00000025538	NOM1	60	64.038	ENSPLAG00000007856	nom1	99	52.701	Poecilia_latipinna
ENSCPOG00000025538	NOM1	96	51.054	ENSPMEG00000014155	nom1	98	53.244	Poecilia_mexicana
ENSCPOG00000025538	NOM1	96	51.011	ENSPREG00000008850	nom1	99	50.822	Poecilia_reticulata
ENSCPOG00000025538	NOM1	96	63.615	ENSPPYG00000018222	NOM1	95	65.749	Pongo_abelii
ENSCPOG00000025538	NOM1	79	65.654	ENSPCAG00000000440	NOM1	96	55.685	Procavia_capensis
ENSCPOG00000025538	NOM1	61	77.589	ENSPCOG00000015222	NOM1	100	77.589	Propithecus_coquereli
ENSCPOG00000025538	NOM1	97	64.311	ENSPVAG00000014760	NOM1	98	64.028	Pteropus_vampyrus
ENSCPOG00000025538	NOM1	96	50.955	ENSPNYG00000006975	nom1	96	62.734	Pundamilia_nyererei
ENSCPOG00000025538	NOM1	63	58.288	ENSPNAG00000011085	nom1	78	54.429	Pygocentrus_nattereri
ENSCPOG00000025538	NOM1	97	65.580	ENSRNOG00000048969	AABR07059041.1	99	65.693	Rattus_norvegicus
ENSCPOG00000025538	NOM1	96	66.863	ENSRBIG00000037042	NOM1	95	69.056	Rhinopithecus_bieti
ENSCPOG00000025538	NOM1	96	66.510	ENSRROG00000037293	NOM1	95	68.698	Rhinopithecus_roxellana
ENSCPOG00000025538	NOM1	78	67.804	ENSSHAG00000017998	-	98	68.101	Sarcophilus_harrisii
ENSCPOG00000025538	NOM1	55	59.916	ENSSFOG00015003196	nom1	99	59.916	Scleropages_formosus
ENSCPOG00000025538	NOM1	96	51.297	ENSSMAG00000011047	nom1	98	51.458	Scophthalmus_maximus
ENSCPOG00000025538	NOM1	61	64.906	ENSSDUG00000006834	nom1	98	52.262	Seriola_dumerili
ENSCPOG00000025538	NOM1	61	64.717	ENSSLDG00000021812	nom1	98	51.957	Seriola_lalandi_dorsalis
ENSCPOG00000025538	NOM1	80	57.372	ENSSPUG00000002556	NOM1	99	63.371	Sphenodon_punctatus
ENSCPOG00000025538	NOM1	82	57.687	ENSTGUG00000000702	-	97	59.853	Taeniopygia_guttata
ENSCPOG00000025538	NOM1	63	62.546	ENSTRUG00000010239	nom1	98	51.377	Takifugu_rubripes
ENSCPOG00000025538	NOM1	96	49.940	ENSTNIG00000012783	nom1	99	51.617	Tetraodon_nigroviridis
ENSCPOG00000025538	NOM1	98	63.561	ENSTTRG00000009691	NOM1	96	64.346	Tursiops_truncatus
ENSCPOG00000025538	NOM1	97	64.727	ENSUAMG00000025450	NOM1	100	63.709	Ursus_americanus
ENSCPOG00000025538	NOM1	85	66.577	ENSUMAG00000014275	NOM1	99	69.871	Ursus_maritimus
ENSCPOG00000025538	NOM1	97	64.048	ENSVVUG00000002608	NOM1	96	64.048	Vulpes_vulpes
ENSCPOG00000025538	NOM1	83	54.926	ENSXETG00000021611	nom1	94	60.851	Xenopus_tropicalis
ENSCPOG00000025538	NOM1	98	52.123	ENSXMAG00000002451	nom1	99	52.302	Xiphophorus_maculatus