EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000025539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC100716855
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 3242 bases
Position: chrDS563223.1:63869-67110
Accession: 100716855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000018358	Brix	PF04427.18	1.1e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000019969	-	1104	XM_013145251	ENSCPOP00000018358	368 (aa)	XP_013000705	H0W5V4

Gene Model

Click here to download ENSCPOG00000025539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000025539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000025539	-	93	86.919	ENSG00000243207	PPAN-P2RY11	66	86.919	Homo_sapiens
ENSCPOG00000025539	-	93	86.919	ENSG00000130810	PPAN	99	90.909	Homo_sapiens
ENSCPOG00000025539	-	93	63.663	ENSAPOG00000017687	ppan	64	63.663	Acanthochromis_polyacanthus
ENSCPOG00000025539	-	93	88.663	ENSAMEG00000011989	-	74	88.663	Ailuropoda_melanoleuca
ENSCPOG00000025539	-	90	62.162	ENSACIG00000007417	ppan	65	61.047	Amphilophus_citrinellus
ENSCPOG00000025539	-	93	64.244	ENSAOCG00000005416	ppan	64	64.244	Amphiprion_ocellaris
ENSCPOG00000025539	-	93	64.244	ENSAPEG00000010382	ppan	64	64.244	Amphiprion_percula
ENSCPOG00000025539	-	99	61.308	ENSATEG00000021221	ppan	67	63.714	Anabas_testudineus
ENSCPOG00000025539	-	99	64.110	ENSACAG00000003838	-	68	64.110	Anolis_carolinensis
ENSCPOG00000025539	-	93	85.174	ENSANAG00000020371	-	74	85.174	Aotus_nancymaae
ENSCPOG00000025539	-	93	78.488	ENSANAG00000038012	-	91	80.233	Aotus_nancymaae
ENSCPOG00000025539	-	93	60.174	ENSACLG00000019215	ppan	66	60.174	Astatotilapia_calliptera
ENSCPOG00000025539	-	93	60.465	ENSAMXG00000032540	ppan	64	60.465	Astyanax_mexicanus
ENSCPOG00000025539	-	100	82.400	ENSBTAG00000012745	PPAN	80	82.400	Bos_taurus
ENSCPOG00000025539	-	90	39.130	WBGene00003062	lpd-6	58	39.403	Caenorhabditis_elegans
ENSCPOG00000025539	-	93	85.465	ENSCJAG00000039296	PPAN	74	85.465	Callithrix_jacchus
ENSCPOG00000025539	-	99	84.906	ENSCAFG00000017917	P2RY11	66	84.906	Canis_familiaris
ENSCPOG00000025539	-	99	84.906	ENSCAFG00020023621	-	79	84.906	Canis_lupus_dingo
ENSCPOG00000025539	-	99	82.306	ENSCHIG00000006450	-	80	82.306	Capra_hircus
ENSCPOG00000025539	-	93	85.465	ENSCCAG00000032527	-	74	85.465	Cebus_capucinus
ENSCPOG00000025539	-	99	83.333	ENSCATG00000040554	-	77	83.333	Cercocebus_atys
ENSCPOG00000025539	-	99	86.863	ENSCLAG00000009362	-	79	86.863	Chinchilla_lanigera
ENSCPOG00000025539	-	93	86.919	ENSCSAG00000007423	-	73	86.919	Chlorocebus_sabaeus
ENSCPOG00000025539	-	88	73.913	ENSCPBG00000005372	-	62	73.653	Chrysemys_picta_bellii
ENSCPOG00000025539	-	83	49.843	ENSCING00000005420	ppan	78	46.910	Ciona_intestinalis
ENSCPOG00000025539	-	89	46.471	ENSCSAVG00000005816	-	77	46.154	Ciona_savignyi
ENSCPOG00000025539	-	76	86.121	ENSCANG00000036259	-	69	86.121	Colobus_angolensis_palliatus
ENSCPOG00000025539	-	93	86.628	ENSCGRG00001015990	Ppan	79	81.892	Cricetulus_griseus_chok1gshd
ENSCPOG00000025539	-	76	84.698	ENSCGRG00000012785	Ppan	69	84.698	Cricetulus_griseus_crigri
ENSCPOG00000025539	-	87	67.085	ENSCSEG00000021023	ppan	63	64.000	Cynoglossus_semilaevis
ENSCPOG00000025539	-	90	63.063	ENSCVAG00000013547	ppan	64	61.919	Cyprinodon_variegatus
ENSCPOG00000025539	-	92	63.529	ENSDARG00000022232	ppan	65	63.529	Danio_rerio
ENSCPOG00000025539	-	82	91.000	ENSDNOG00000047670	-	68	91.000	Dasypus_novemcinctus
ENSCPOG00000025539	-	93	86.919	ENSDORG00000003829	Ppan	100	86.919	Dipodomys_ordii
ENSCPOG00000025539	-	87	39.571	FBgn0010770	ppan	71	40.184	Drosophila_melanogaster
ENSCPOG00000025539	-	99	80.593	ENSETEG00000019286	-	80	80.429	Echinops_telfairi
ENSCPOG00000025539	-	68	64.286	ENSEBUG00000004335	ppan	61	64.286	Eptatretus_burgeri
ENSCPOG00000025539	-	99	85.946	ENSEASG00005010574	-	79	85.946	Equus_asinus_asinus
ENSCPOG00000025539	-	99	85.676	ENSECAG00000024469	-	79	85.676	Equus_caballus
ENSCPOG00000025539	-	93	61.919	ENSELUG00000024160	ppan	66	61.919	Esox_lucius
ENSCPOG00000025539	-	98	80.874	ENSFCAG00000009388	-	73	81.096	Felis_catus
ENSCPOG00000025539	-	73	70.732	ENSFDAG00000008458	-	71	70.732	Fukomys_damarensis
ENSCPOG00000025539	-	94	61.159	ENSFHEG00000001554	ppan	64	61.947	Fundulus_heteroclitus
ENSCPOG00000025539	-	92	62.426	ENSGMOG00000003431	ppan	65	62.426	Gadus_morhua
ENSCPOG00000025539	-	90	59.760	ENSGALG00000051597	-	84	61.404	Gallus_gallus
ENSCPOG00000025539	-	90	63.363	ENSGAFG00000015832	ppan	66	61.429	Gambusia_affinis
ENSCPOG00000025539	-	93	62.500	ENSGACG00000013723	ppan	66	62.500	Gasterosteus_aculeatus
ENSCPOG00000025539	-	93	72.464	ENSGAGG00000009455	-	64	72.464	Gopherus_agassizii
ENSCPOG00000025539	-	79	86.942	ENSGGOG00000039459	PPAN	69	86.942	Gorilla_gorilla
ENSCPOG00000025539	-	93	60.174	ENSHBUG00000021830	ppan	66	60.174	Haplochromis_burtoni
ENSCPOG00000025539	-	93	90.116	ENSHGLG00000006964	-	73	90.116	Heterocephalus_glaber_female
ENSCPOG00000025539	-	93	90.116	ENSHGLG00100011618	-	73	90.116	Heterocephalus_glaber_male
ENSCPOG00000025539	-	88	50.617	ENSHCOG00000016751	ppan	58	65.196	Hippocampus_comes
ENSCPOG00000025539	-	92	66.077	ENSIPUG00000005082	ppan	61	66.077	Ictalurus_punctatus
ENSCPOG00000025539	-	100	83.957	ENSSTOG00000010828	-	80	83.957	Ictidomys_tridecemlineatus
ENSCPOG00000025539	-	99	83.646	ENSJJAG00000016362	Ppan	81	83.646	Jaculus_jaculus
ENSCPOG00000025539	-	93	60.465	ENSKMAG00000016509	ppan	64	60.465	Kryptolebias_marmoratus
ENSCPOG00000025539	-	90	64.264	ENSLBEG00000020897	ppan	82	62.791	Labrus_bergylta
ENSCPOG00000025539	-	93	59.942	ENSLACG00000001451	ppan	74	59.942	Latimeria_chalumnae
ENSCPOG00000025539	-	92	62.537	ENSLOCG00000007381	ppan	68	59.557	Lepisosteus_oculatus
ENSCPOG00000025539	-	93	87.500	ENSLAFG00000016399	-	74	87.500	Loxodonta_africana
ENSCPOG00000025539	-	99	83.333	ENSMFAG00000042854	-	77	83.333	Macaca_fascicularis
ENSCPOG00000025539	-	98	84.211	ENSMMUG00000017211	PPAN	99	87.500	Macaca_mulatta
ENSCPOG00000025539	-	99	83.333	ENSMNEG00000031363	-	77	83.333	Macaca_nemestrina
ENSCPOG00000025539	-	99	82.787	ENSMLEG00000042991	-	77	82.787	Mandrillus_leucophaeus
ENSCPOG00000025539	-	92	65.294	ENSMAMG00000012418	ppan	64	65.294	Mastacembelus_armatus
ENSCPOG00000025539	-	99	57.221	ENSMZEG00005018872	ppan	91	57.221	Maylandia_zebra
ENSCPOG00000025539	-	99	82.574	ENSMAUG00000000310	Ppan	80	82.574	Mesocricetus_auratus
ENSCPOG00000025539	-	99	80.654	ENSMICG00000047321	-	79	80.654	Microcebus_murinus
ENSCPOG00000025539	-	99	80.429	ENSMOCG00000016402	Ppan	80	80.429	Microtus_ochrogaster
ENSCPOG00000025539	-	89	65.653	ENSMMOG00000011584	ppan	66	64.118	Mola_mola
ENSCPOG00000025539	-	93	77.035	ENSMODG00000005158	PPAN	72	77.035	Monodelphis_domestica
ENSCPOG00000025539	-	95	64.470	ENSMALG00000015931	ppan	65	64.470	Monopterus_albus
ENSCPOG00000025539	-	99	80.697	MGP_CAROLIEiJ_G0031850	Ppan	79	80.697	Mus_caroli
ENSCPOG00000025539	-	99	80.965	ENSMUSG00000004100	Ppan	88	89.412	Mus_musculus
ENSCPOG00000025539	-	99	81.402	MGP_PahariEiJ_G0014716	Ppan	79	81.402	Mus_pahari
ENSCPOG00000025539	-	99	80.965	MGP_SPRETEiJ_G0032974	Ppan	79	80.965	Mus_spretus
ENSCPOG00000025539	-	93	89.535	ENSMPUG00000006866	-	73	89.535	Mustela_putorius_furo
ENSCPOG00000025539	-	100	82.933	ENSMLUG00000014186	-	80	82.933	Myotis_lucifugus
ENSCPOG00000025539	-	73	78.731	ENSNGAG00000012813	Ppan	74	78.731	Nannospalax_galili
ENSCPOG00000025539	-	93	60.174	ENSNBRG00000008460	ppan	65	60.174	Neolamprologus_brichardi
ENSCPOG00000025539	-	98	83.562	ENSNLEG00000012048	-	77	83.562	Nomascus_leucogenys
ENSCPOG00000025539	-	97	73.034	ENSMEUG00000007968	-	80	73.239	Notamacropus_eugenii
ENSCPOG00000025539	-	93	91.279	ENSODEG00000016743	-	73	91.279	Octodon_degus
ENSCPOG00000025539	-	93	60.465	ENSONIG00000001598	ppan	65	60.465	Oreochromis_niloticus
ENSCPOG00000025539	-	93	70.930	ENSOANG00000006740	PPAN	70	70.930	Ornithorhynchus_anatinus
ENSCPOG00000025539	-	95	62.286	ENSORLG00000005634	ppan	66	63.081	Oryzias_latipes
ENSCPOG00000025539	-	95	62.286	ENSORLG00020003966	ppan	66	63.081	Oryzias_latipes_hni
ENSCPOG00000025539	-	95	62.571	ENSORLG00015016869	ppan	86	61.404	Oryzias_latipes_hsok
ENSCPOG00000025539	-	95	60.857	ENSOMEG00000023943	ppan	67	60.857	Oryzias_melastigma
ENSCPOG00000025539	-	93	85.174	ENSOGAG00000014454	-	73	85.174	Otolemur_garnettii
ENSCPOG00000025539	-	90	77.448	ENSOARG00000014981	-	72	77.448	Ovis_aries
ENSCPOG00000025539	-	93	87.209	ENSPPAG00000039744	-	73	87.209	Pan_paniscus
ENSCPOG00000025539	-	97	84.384	ENSPPRG00000023895	-	79	84.384	Panthera_pardus
ENSCPOG00000025539	-	85	82.704	ENSPTIG00000015960	-	77	82.704	Panthera_tigris_altaica
ENSCPOG00000025539	-	93	87.209	ENSPTRG00000010459	PPAN	73	87.209	Pan_troglodytes
ENSCPOG00000025539	-	99	83.333	ENSPANG00000005948	-	77	83.333	Papio_anubis
ENSCPOG00000025539	-	95	61.190	ENSPMGG00000001212	ppan	68	61.190	Periophthalmus_magnuspinnatus
ENSCPOG00000025539	-	98	81.967	ENSPEMG00000015393	Ppan	79	81.967	Peromyscus_maniculatus_bairdii
ENSCPOG00000025539	-	93	75.872	ENSPCIG00000018786	-	64	75.872	Phascolarctos_cinereus
ENSCPOG00000025539	-	90	64.264	ENSPFOG00000005396	ppan	64	63.081	Poecilia_formosa
ENSCPOG00000025539	-	95	62.000	ENSPLAG00000021445	ppan	64	62.791	Poecilia_latipinna
ENSCPOG00000025539	-	90	63.964	ENSPMEG00000011625	ppan	66	62.000	Poecilia_mexicana
ENSCPOG00000025539	-	90	63.964	ENSPREG00000006330	ppan	64	62.500	Poecilia_reticulata
ENSCPOG00000025539	-	81	81.639	ENSPCAG00000007303	-	77	81.639	Procavia_capensis
ENSCPOG00000025539	-	99	82.016	ENSPCOG00000027096	-	79	82.016	Propithecus_coquereli
ENSCPOG00000025539	-	99	82.038	ENSPVAG00000003673	-	79	82.038	Pteropus_vampyrus
ENSCPOG00000025539	-	93	60.174	ENSPNYG00000013872	ppan	66	60.174	Pundamilia_nyererei
ENSCPOG00000025539	-	93	62.500	ENSPNAG00000017058	ppan	64	62.500	Pygocentrus_nattereri
ENSCPOG00000025539	-	99	80.429	ENSRNOG00000020608	Ppan	79	80.429	Rattus_norvegicus
ENSCPOG00000025539	-	93	86.047	ENSRBIG00000041320	-	73	86.047	Rhinopithecus_bieti
ENSCPOG00000025539	-	93	86.047	ENSRROG00000038245	-	91	86.047	Rhinopithecus_roxellana
ENSCPOG00000025539	-	93	86.047	ENSRROG00000034660	-	73	86.047	Rhinopithecus_roxellana
ENSCPOG00000025539	-	97	34.332	YDR312W	-	93	34.732	Saccharomyces_cerevisiae
ENSCPOG00000025539	-	94	35.084	YHR066W	-	92	35.934	Saccharomyces_cerevisiae
ENSCPOG00000025539	-	93	85.756	ENSSBOG00000026246	-	74	85.756	Saimiri_boliviensis_boliviensis
ENSCPOG00000025539	-	82	72.638	ENSSHAG00000009305	-	75	72.638	Sarcophilus_harrisii
ENSCPOG00000025539	-	93	64.244	ENSSFOG00015023726	ppan	67	64.244	Scleropages_formosus
ENSCPOG00000025539	-	90	63.964	ENSSMAG00000004098	ppan	64	62.500	Scophthalmus_maximus
ENSCPOG00000025539	-	90	66.366	ENSSDUG00000021301	ppan	64	65.407	Seriola_dumerili
ENSCPOG00000025539	-	90	66.066	ENSSLDG00000016106	ppan	65	65.116	Seriola_lalandi_dorsalis
ENSCPOG00000025539	-	93	65.407	ENSSPAG00000000160	ppan	64	65.407	Stegastes_partitus
ENSCPOG00000025539	-	99	84.987	ENSSSCG00000013662	PPAN	80	84.987	Sus_scrofa
ENSCPOG00000025539	-	89	65.549	ENSTRUG00000007656	ppan	65	64.970	Takifugu_rubripes
ENSCPOG00000025539	-	89	65.749	ENSTNIG00000018564	ppan	72	64.497	Tetraodon_nigroviridis
ENSCPOG00000025539	-	66	90.083	ENSTBEG00000002721	-	51	90.083	Tupaia_belangeri
ENSCPOG00000025539	-	99	76.486	ENSTTRG00000004530	-	79	76.486	Tursiops_truncatus
ENSCPOG00000025539	-	61	85.778	ENSUAMG00000007239	-	93	85.778	Ursus_americanus
ENSCPOG00000025539	-	99	84.636	ENSVVUG00000028309	-	79	84.636	Vulpes_vulpes
ENSCPOG00000025539	-	87	67.812	ENSXETG00000022055	ppan	62	65.875	Xenopus_tropicalis
ENSCPOG00000025539	-	90	63.363	ENSXMAG00000028708	ppan	65	62.209	Xiphophorus_maculatus