EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000025574 (Gene tree)
Gene ID
100728725
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
polyadenylate-binding protein 2
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
5189 bases
Position
chrDS562868.1:17520675-17525863
Accession
100728725
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000017334RRM_1PF00076.226.8e-1511
ENSCPOP00000028723RRM_1PF00076.226.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000039689PABPN1-2011903XM_003474490ENSCPOP00000028723306 (aa)XP_003474538A0A286XTB5
ENSCPOT00000020399PABPN1-2021320-ENSCPOP00000017334304 (aa)-H0W2Y9
Gene Model
Click here to download ENSCPOG00000025574's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000025574's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000025574PABPN15253.012ENSCPOG00000025951PABPN1L7647.867
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000025574PABPN16299.471ENSG00000258643BCL2L2-PABPN15799.471Homo_sapiens
ENSCPOG00000025574PABPN110098.366ENSG00000100836PABPN110099.438Homo_sapiens
ENSCPOG00000025574PABPN16881.340ENSAPOG00000016425pabpn18681.553Acanthochromis_polyacanthus
ENSCPOG00000025574PABPN16299.471ENSAMEG00000007048BCL2L2-PABPN110099.471Ailuropoda_melanoleuca
ENSCPOG00000025574PABPN16777.404ENSACIG00000021744pabpn19481.548Amphilophus_citrinellus
ENSCPOG00000025574PABPN16881.340ENSAOCG00000015805pabpn18681.553Amphiprion_ocellaris
ENSCPOG00000025574PABPN16881.340ENSAPEG00000009623pabpn18681.553Amphiprion_percula
ENSCPOG00000025574PABPN16881.818ENSATEG00000020531pabpn18682.039Anabas_testudineus
ENSCPOG00000025574PABPN16687.685ENSACAG00000006185-7486.603Anolis_carolinensis
ENSCPOG00000025574PABPN110089.542ENSANAG00000024513-10089.542Aotus_nancymaae
ENSCPOG00000025574PABPN16777.033ENSACLG00000016374pabpn16680.402Astatotilapia_calliptera
ENSCPOG00000025574PABPN16883.254ENSAMXG00000000452pabpn19483.333Astyanax_mexicanus
ENSCPOG00000025574PABPN15795.402ENSBTAG00000050594-7293.956Bos_taurus
ENSCPOG00000025574PABPN110097.712ENSBTAG00000006884PABPN110097.712Bos_taurus
ENSCPOG00000025574PABPN19276.512ENSBTAG00000053753-9176.157Bos_taurus
ENSCPOG00000025574PABPN15897.753ENSCJAG00000004407-8997.753Callithrix_jacchus
ENSCPOG00000025574PABPN110098.366ENSCJAG00000007960-10098.366Callithrix_jacchus
ENSCPOG00000025574PABPN110095.425ENSCAFG00000011482PABPN110095.425Canis_familiaris
ENSCPOG00000025574PABPN110098.366ENSCAFG00020006651-10098.366Canis_lupus_dingo
ENSCPOG00000025574PABPN110098.366ENSCAFG00020007298-10098.366Canis_lupus_dingo
ENSCPOG00000025574PABPN110098.039ENSCHIG00000012184PABPN110098.039Capra_hircus
ENSCPOG00000025574PABPN16299.471ENSTSYG00000033996BCL2L2-PABPN110099.438Carlito_syrichta
ENSCPOG00000025574PABPN110098.366ENSCCAG00000033954BCL2L2-PABPN110098.366Cebus_capucinus
ENSCPOG00000025574PABPN110098.366ENSCATG00000038536BCL2L2-PABPN110098.366Cercocebus_atys
ENSCPOG00000025574PABPN16780.976ENSCLAG00000012423PABPN16581.132Chinchilla_lanigera
ENSCPOG00000025574PABPN110096.732ENSCSAG00000016036PABPN110096.732Chlorocebus_sabaeus
ENSCPOG00000025574PABPN16488.060ENSCHOG00000004798BCL2L2-PABPN18788.060Choloepus_hoffmanni
ENSCPOG00000025574PABPN15592.216ENSCPBG00000026060-9492.216Chrysemys_picta_bellii
ENSCPOG00000025574PABPN16562.189ENSCING00000012468-8464.677Ciona_intestinalis
ENSCPOG00000025574PABPN15860.112ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSCPOG00000025574PABPN19680.678ENSCANG00000030980-7483.415Colobus_angolensis_palliatus
ENSCPOG00000025574PABPN16299.471ENSCANG00000009750BCL2L2-PABPN110099.438Colobus_angolensis_palliatus
ENSCPOG00000025574PABPN110096.732ENSCGRG00001019696Pabpn110098.876Cricetulus_griseus_chok1gshd
ENSCPOG00000025574PABPN15898.876ENSCGRG00000011102Pabpn110098.876Cricetulus_griseus_crigri
ENSCPOG00000025574PABPN16879.439ENSCSEG00000008774pabpn18980.000Cynoglossus_semilaevis
ENSCPOG00000025574PABPN16878.469ENSCVAG00000003152pabpn18680.583Cyprinodon_variegatus
ENSCPOG00000025574PABPN16882.775ENSDARG00000045373pabpn18683.010Danio_rerio
ENSCPOG00000025574PABPN110098.366ENSDNOG00000023682PABPN110098.366Dasypus_novemcinctus
ENSCPOG00000025574PABPN110099.020ENSDORG00000028966-10099.020Dipodomys_ordii
ENSCPOG00000025574PABPN16262.827FBgn0005648Pabp28262.827Drosophila_melanogaster
ENSCPOG00000025574PABPN16378.974ENSEBUG00000002322pabpn18379.381Eptatretus_burgeri
ENSCPOG00000025574PABPN110098.366ENSEASG00005011716PABPN110098.366Equus_asinus_asinus
ENSCPOG00000025574PABPN19998.344ENSECAG00000011652PABPN19998.299Equus_caballus
ENSCPOG00000025574PABPN19390.845ENSEEUG00000012973-7293.396Erinaceus_europaeus
ENSCPOG00000025574PABPN18672.727ENSELUG00000022654pabpn18584.951Esox_lucius
ENSCPOG00000025574PABPN110098.366ENSFCAG00000031922PABPN110098.366Felis_catus
ENSCPOG00000025574PABPN15899.438ENSFDAG00000018381BCL2L2-PABPN110099.438Fukomys_damarensis
ENSCPOG00000025574PABPN16876.555ENSFHEG00000007215pabpn18679.612Fundulus_heteroclitus
ENSCPOG00000025574PABPN16482.741ENSGMOG00000003922pabpn16682.990Gadus_morhua
ENSCPOG00000025574PABPN16389.286ENSGALG00000052930-6089.320Gallus_gallus
ENSCPOG00000025574PABPN16881.429ENSGAFG00000017099pabpn18681.643Gambusia_affinis
ENSCPOG00000025574PABPN16877.376ENSGACG00000002167pabpn19076.126Gasterosteus_aculeatus
ENSCPOG00000025574PABPN19380.769ENSGGOG00000025919-9883.784Gorilla_gorilla
ENSCPOG00000025574PABPN110098.366ENSGGOG00000022683-10098.366Gorilla_gorilla
ENSCPOG00000025574PABPN19276.596ENSGGOG00000039675-7680.976Gorilla_gorilla
ENSCPOG00000025574PABPN16881.818ENSHBUG00000019523pabpn18682.039Haplochromis_burtoni
ENSCPOG00000025574PABPN15576.647ENSHGLG00000009842-9376.647Heterocephalus_glaber_female
ENSCPOG00000025574PABPN1100100.000ENSHGLG00000002927-100100.000Heterocephalus_glaber_female
ENSCPOG00000025574PABPN19275.801ENSHGLG00000018588-7182.464Heterocephalus_glaber_female
ENSCPOG00000025574PABPN15588.889ENSHGLG00100018935-9488.889Heterocephalus_glaber_male
ENSCPOG00000025574PABPN19270.000ENSHGLG00100015565-7382.464Heterocephalus_glaber_male
ENSCPOG00000025574PABPN158100.000ENSHGLG00100006673-100100.000Heterocephalus_glaber_male
ENSCPOG00000025574PABPN16877.404ENSHCOG00000004655pabpn18681.068Hippocampus_comes
ENSCPOG00000025574PABPN16775.342ENSIPUG00000000180-9475.926Ictalurus_punctatus
ENSCPOG00000025574PABPN16882.297ENSIPUG00000008085PABPN18682.524Ictalurus_punctatus
ENSCPOG00000025574PABPN15899.438ENSSTOG00000029847BCL2L2-PABPN110099.438Ictidomys_tridecemlineatus
ENSCPOG00000025574PABPN15899.438ENSJJAG00000023507Gm2052110099.438Jaculus_jaculus
ENSCPOG00000025574PABPN16880.952ENSKMAG00000018748pabpn18681.159Kryptolebias_marmoratus
ENSCPOG00000025574PABPN16881.818ENSLBEG00000027266pabpn18682.039Labrus_bergylta
ENSCPOG00000025574PABPN15887.079ENSLACG00000000646pabpn18384.817Latimeria_chalumnae
ENSCPOG00000025574PABPN16864.286ENSLOCG00000004694pabpn1l9564.734Lepisosteus_oculatus
ENSCPOG00000025574PABPN18270.635ENSLOCG00000000796pabpn16983.505Lepisosteus_oculatus
ENSCPOG00000025574PABPN110086.601ENSMFAG00000032183BCL2L2-PABPN110099.438Macaca_fascicularis
ENSCPOG00000025574PABPN19777.258ENSMMUG00000048382-6882.353Macaca_mulatta
ENSCPOG00000025574PABPN16299.471ENSMMUG00000014747BCL2L2-PABPN110099.315Macaca_mulatta
ENSCPOG00000025574PABPN110098.366ENSMNEG00000045065BCL2L2-PABPN110098.366Macaca_nemestrina
ENSCPOG00000025574PABPN17482.258ENSMNEG00000035750-9992.199Macaca_nemestrina
ENSCPOG00000025574PABPN19772.973ENSMLEG00000034623-9990.071Mandrillus_leucophaeus
ENSCPOG00000025574PABPN16299.471ENSMLEG00000043862BCL2L2-PABPN110099.438Mandrillus_leucophaeus
ENSCPOG00000025574PABPN18569.732ENSMAMG00000007979pabpn16881.773Mastacembelus_armatus
ENSCPOG00000025574PABPN16481.726ENSMZEG00005011904pabpn16681.959Maylandia_zebra
ENSCPOG00000025574PABPN19896.678ENSMAUG00000007383Gm205219996.678Mesocricetus_auratus
ENSCPOG00000025574PABPN110098.693ENSMICG00000010002BCL2L2-PABPN110098.693Microcebus_murinus
ENSCPOG00000025574PABPN110096.405ENSMOCG00000018557Gm2052110096.405Microtus_ochrogaster
ENSCPOG00000025574PABPN16882.297ENSMMOG00000005405pabpn18682.524Mola_mola
ENSCPOG00000025574PABPN16996.651ENSMODG00000004535-6996.667Monodelphis_domestica
ENSCPOG00000025574PABPN16781.553ENSMALG00000019612pabpn16781.773Monopterus_albus
ENSCPOG00000025574PABPN16297.354MGP_CAROLIEiJ_G0019276Gm205215797.354Mus_caroli
ENSCPOG00000025574PABPN110095.752MGP_CAROLIEiJ_G0019277Pabpn110097.191Mus_caroli
ENSCPOG00000025574PABPN16297.884ENSMUSG00000092232Gm205215797.884Mus_musculus
ENSCPOG00000025574PABPN110096.078ENSMUSG00000022194Pabpn110097.753Mus_musculus
ENSCPOG00000025574PABPN16297.884MGP_PahariEiJ_G0030294Gm205215797.884Mus_pahari
ENSCPOG00000025574PABPN110096.078MGP_PahariEiJ_G0030295Pabpn110097.753Mus_pahari
ENSCPOG00000025574PABPN110096.078MGP_SPRETEiJ_G0020166Pabpn110097.753Mus_spretus
ENSCPOG00000025574PABPN16297.884MGP_SPRETEiJ_G0020165Gm205215797.884Mus_spretus
ENSCPOG00000025574PABPN15599.398ENSMPUG00000006775-9999.398Mustela_putorius_furo
ENSCPOG00000025574PABPN19578.276ENSMLUG00000028677-7593.659Myotis_lucifugus
ENSCPOG00000025574PABPN19287.324ENSMLUG00000012452-7092.056Myotis_lucifugus
ENSCPOG00000025574PABPN16297.354ENSMLUG00000003800-10097.354Myotis_lucifugus
ENSCPOG00000025574PABPN16299.471ENSNGAG00000019529Gm205215799.471Nannospalax_galili
ENSCPOG00000025574PABPN16481.726ENSNBRG00000023955pabpn19481.548Neolamprologus_brichardi
ENSCPOG00000025574PABPN16999.052ENSNLEG00000015007-7599.057Nomascus_leucogenys
ENSCPOG00000025574PABPN19775.168ENSNLEG00000030598-7981.132Nomascus_leucogenys
ENSCPOG00000025574PABPN19283.986ENSODEG00000003739-7587.783Octodon_degus
ENSCPOG00000025574PABPN15887.640ENSODEG00000011555-8987.425Octodon_degus
ENSCPOG00000025574PABPN1100100.000ENSODEG00000002083BCL2L2-PABPN1100100.000Octodon_degus
ENSCPOG00000025574PABPN16481.726ENSONIG00000008112pabpn16681.959Oreochromis_niloticus
ENSCPOG00000025574PABPN19996.382ENSOCUG00000016174PABPN110096.382Oryctolagus_cuniculus
ENSCPOG00000025574PABPN16782.039ENSORLG00000027900pabpn18479.412Oryzias_latipes
ENSCPOG00000025574PABPN16782.039ENSORLG00020004681pabpn16782.266Oryzias_latipes_hni
ENSCPOG00000025574PABPN16882.297ENSORLG00015000018pabpn18682.524Oryzias_latipes_hsok
ENSCPOG00000025574PABPN16878.744ENSOMEG00000016618pabpn16982.143Oryzias_melastigma
ENSCPOG00000025574PABPN110098.366ENSOGAG00000008710PABPN110098.366Otolemur_garnettii
ENSCPOG00000025574PABPN16299.471ENSOARG00000019336BCL2L2-PABPN15299.471Ovis_aries
ENSCPOG00000025574PABPN16299.471ENSPPAG00000028984BCL2L2-PABPN19999.398Pan_paniscus
ENSCPOG00000025574PABPN15582.635ENSPPAG00000039421-9382.635Pan_paniscus
ENSCPOG00000025574PABPN110098.366ENSPPRG00000010567PABPN110098.366Panthera_pardus
ENSCPOG00000025574PABPN15899.438ENSPTIG00000001063BCL2L2-PABPN110099.438Panthera_tigris_altaica
ENSCPOG00000025574PABPN110098.366ENSPTRG00000006167BCL2L210098.366Pan_troglodytes
ENSCPOG00000025574PABPN19271.986ENSPTRG00000047273-9568.385Pan_troglodytes
ENSCPOG00000025574PABPN19777.703ENSPANG00000023326-9992.199Papio_anubis
ENSCPOG00000025574PABPN110098.366ENSPANG00000021100BCL2L2-PABPN110098.366Papio_anubis
ENSCPOG00000025574PABPN16285.263ENSPKIG00000008144-6782.266Paramormyrops_kingsleyae
ENSCPOG00000025574PABPN16463.636ENSPKIG00000008340pabpn1l9263.636Paramormyrops_kingsleyae
ENSCPOG00000025574PABPN16881.340ENSPKIG00000018052pabpn18682.039Paramormyrops_kingsleyae
ENSCPOG00000025574PABPN18268.651ENSPMGG00000022027pabpn16981.443Periophthalmus_magnuspinnatus
ENSCPOG00000025574PABPN110096.732ENSPEMG00000008332Gm2052110096.732Peromyscus_maniculatus_bairdii
ENSCPOG00000025574PABPN15477.778ENSPMAG00000006212pabpn18475.862Petromyzon_marinus
ENSCPOG00000025574PABPN16996.682ENSPCIG00000027751-6996.698Phascolarctos_cinereus
ENSCPOG00000025574PABPN16878.095ENSPFOG00000010351pabpn18680.193Poecilia_formosa
ENSCPOG00000025574PABPN16780.676ENSPLAG00000022696pabpn16880.882Poecilia_latipinna
ENSCPOG00000025574PABPN16878.095ENSPMEG00000020856pabpn18680.193Poecilia_mexicana
ENSCPOG00000025574PABPN16878.571ENSPREG00000011278pabpn18680.676Poecilia_reticulata
ENSCPOG00000025574PABPN19792.517ENSPPYG00000005663PABPN19992.517Pongo_abelii
ENSCPOG00000025574PABPN16984.360ENSPCAG00000005902PABPN19287.037Procavia_capensis
ENSCPOG00000025574PABPN110098.693ENSPCOG00000028047BCL2L2-PABPN110098.693Propithecus_coquereli
ENSCPOG00000025574PABPN16995.261ENSPVAG00000005270PABPN17095.283Pteropus_vampyrus
ENSCPOG00000025574PABPN16881.818ENSPNYG00000013182pabpn18682.039Pundamilia_nyererei
ENSCPOG00000025574PABPN16883.254ENSPNAG00000023526pabpn18683.495Pygocentrus_nattereri
ENSCPOG00000025574PABPN16563.000ENSPNAG00000021666pabpn1l9464.677Pygocentrus_nattereri
ENSCPOG00000025574PABPN110096.405ENSRNOG00000042195Pabpn110096.405Rattus_norvegicus
ENSCPOG00000025574PABPN19782.095ENSRBIG00000039547-7584.878Rhinopithecus_bieti
ENSCPOG00000025574PABPN19283.571ENSRBIG00000042811-8885.377Rhinopithecus_bieti
ENSCPOG00000025574PABPN15899.435ENSRBIG00000040762BCL2L2-PABPN15599.435Rhinopithecus_bieti
ENSCPOG00000025574PABPN19981.967ENSRROG00000040409-7585.366Rhinopithecus_roxellana
ENSCPOG00000025574PABPN15899.438ENSRROG00000045535BCL2L2-PABPN110099.438Rhinopithecus_roxellana
ENSCPOG00000025574PABPN19280.357ENSRROG00000036409-8382.824Rhinopithecus_roxellana
ENSCPOG00000025574PABPN16293.069ENSSBOG00000026930BCL2L2-PABPN19999.398Saimiri_boliviensis_boliviensis
ENSCPOG00000025574PABPN17186.697ENSSHAG00000014841-8796.825Sarcophilus_harrisii
ENSCPOG00000025574PABPN18764.151ENSSHAG00000007707-9074.057Sarcophilus_harrisii
ENSCPOG00000025574PABPN16860.577ENSSFOG00015015833pabpn1l8863.636Scleropages_formosus
ENSCPOG00000025574PABPN17177.376ENSSFOG00015012565pabpn19081.068Scleropages_formosus
ENSCPOG00000025574PABPN16880.861ENSSFOG00015014718pabpn18681.553Scleropages_formosus
ENSCPOG00000025574PABPN16881.818ENSSMAG00000020157pabpn18682.039Scophthalmus_maximus
ENSCPOG00000025574PABPN16781.553ENSSDUG00000020582pabpn16781.773Seriola_dumerili
ENSCPOG00000025574PABPN16881.818ENSSLDG00000007118pabpn18682.039Seriola_lalandi_dorsalis
ENSCPOG00000025574PABPN15591.018ENSSPUG00000018308-9491.018Sphenodon_punctatus
ENSCPOG00000025574PABPN16881.818ENSSPAG00000021658pabpn18682.039Stegastes_partitus
ENSCPOG00000025574PABPN17372.197ENSSSCG00000034805-7668.137Sus_scrofa
ENSCPOG00000025574PABPN110098.366ENSSSCG00000002023PABPN110098.366Sus_scrofa
ENSCPOG00000025574PABPN15854.545ENSSSCG00000038472-9153.892Sus_scrofa
ENSCPOG00000025574PABPN16882.297ENSTRUG00000023664pabpn18682.524Takifugu_rubripes
ENSCPOG00000025574PABPN16780.097ENSTNIG00000005369pabpn19280.296Tetraodon_nigroviridis
ENSCPOG00000025574PABPN110097.712ENSUAMG00000024460PABPN110097.712Ursus_americanus
ENSCPOG00000025574PABPN16299.471ENSUMAG00000014288BCL2L2-PABPN15799.471Ursus_maritimus
ENSCPOG00000025574PABPN16299.471ENSVVUG00000019912BCL2L2-PABPN17697.927Vulpes_vulpes
ENSCPOG00000025574PABPN16489.796ENSXETG00000014597pabpn17089.372Xenopus_tropicalis
ENSCPOG00000025574PABPN15768.362ENSXCOG00000005158pabpn18980.921Xiphophorus_couchianus
ENSCPOG00000025574PABPN16879.048ENSXMAG00000006196pabpn18681.159Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us