EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000025951 (Gene tree)
Gene ID: 100731230
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 1880 bases
Position: chrDS563201.1:52758-54637
Accession: 100731230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000018565	RRM_1	PF00076.22	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000023348	PABPN1L-201	822	XM_003460905	ENSCPOP00000018565	273 (aa)	XP_003460953	H0W6G1

Gene Model

Click here to download ENSCPOG00000025951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000025951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000025951	PABPN1L	76	47.867	ENSCPOG00000025574	PABPN1	52	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000025951	PABPN1L	100	67.742	ENSG00000205022	PABPN1L	100	67.626	Homo_sapiens
ENSCPOG00000025951	PABPN1L	56	53.896	ENSAPOG00000000685	PABPN1L	50	53.846	Acanthochromis_polyacanthus
ENSCPOG00000025951	PABPN1L	55	55.333	ENSACIG00000021400	PABPN1L	66	62.712	Amphilophus_citrinellus
ENSCPOG00000025951	PABPN1L	56	53.797	ENSATEG00000011646	PABPN1L	60	52.564	Anabas_testudineus
ENSCPOG00000025951	PABPN1L	71	55.155	ENSACAG00000013250	PABPN1L	80	58.125	Anolis_carolinensis
ENSCPOG00000025951	PABPN1L	100	64.621	ENSANAG00000038178	PABPN1L	100	63.768	Aotus_nancymaae
ENSCPOG00000025951	PABPN1L	73	46.269	ENSACLG00000025147	PABPN1L	71	47.644	Astatotilapia_calliptera
ENSCPOG00000025951	PABPN1L	55	52.349	ENSAMXG00000010873	PABPN1L	58	53.548	Astyanax_mexicanus
ENSCPOG00000025951	PABPN1L	51	76.978	ENSBTAG00000006727	-	85	76.978	Bos_taurus
ENSCPOG00000025951	PABPN1L	100	63.799	ENSBTAG00000023752	-	100	64.516	Bos_taurus
ENSCPOG00000025951	PABPN1L	100	64.855	ENSCJAG00000045284	PABPN1L	100	65.704	Callithrix_jacchus
ENSCPOG00000025951	PABPN1L	100	62.676	ENSCHIG00000013987	PABPN1L	89	63.241	Capra_hircus
ENSCPOG00000025951	PABPN1L	95	96.255	ENSCAPG00000007240	PABPN1L	100	96.255	Cavia_aperea
ENSCPOG00000025951	PABPN1L	100	66.304	ENSCCAG00000027631	PABPN1L	100	66.426	Cebus_capucinus
ENSCPOG00000025951	PABPN1L	100	67.273	ENSCATG00000031060	PABPN1L	100	68.000	Cercocebus_atys
ENSCPOG00000025951	PABPN1L	100	85.348	ENSCLAG00000000704	PABPN1L	100	84.249	Chinchilla_lanigera
ENSCPOG00000025951	PABPN1L	100	65.292	ENSCSAG00000002881	PABPN1L	100	65.292	Chlorocebus_sabaeus
ENSCPOG00000025951	PABPN1L	59	61.350	ENSCPBG00000023441	PABPN1L	61	53.807	Chrysemys_picta_bellii
ENSCPOG00000025951	PABPN1L	100	67.029	ENSCANG00000039336	PABPN1L	100	66.667	Colobus_angolensis_palliatus
ENSCPOG00000025951	PABPN1L	100	69.091	ENSCGRG00001013211	Pabpn1l	100	68.727	Cricetulus_griseus_chok1gshd
ENSCPOG00000025951	PABPN1L	100	69.091	ENSCGRG00000015868	Pabpn1l	100	68.727	Cricetulus_griseus_crigri
ENSCPOG00000025951	PABPN1L	55	51.656	ENSCSEG00000001142	pabpn1l	66	49.162	Cynoglossus_semilaevis
ENSCPOG00000025951	PABPN1L	100	56.690	ENSDNOG00000034677	PABPN1L	100	55.516	Dasypus_novemcinctus
ENSCPOG00000025951	PABPN1L	100	68.841	ENSEASG00005000777	PABPN1L	96	67.045	Equus_asinus_asinus
ENSCPOG00000025951	PABPN1L	100	68.841	ENSECAG00000000378	PABPN1L	93	68.254	Equus_caballus
ENSCPOG00000025951	PABPN1L	100	57.875	ENSEEUG00000004747	PABPN1L	100	57.875	Erinaceus_europaeus
ENSCPOG00000025951	PABPN1L	59	52.147	ENSELUG00000018385	PABPN1L	63	50.000	Esox_lucius
ENSCPOG00000025951	PABPN1L	100	67.025	ENSFCAG00000010465	PABPN1L	100	67.025	Felis_catus
ENSCPOG00000025951	PABPN1L	71	55.838	ENSFALG00000003319	PABPN1L	64	59.259	Ficedula_albicollis
ENSCPOG00000025951	PABPN1L	100	82.051	ENSFDAG00000021067	PABPN1L	100	81.319	Fukomys_damarensis
ENSCPOG00000025951	PABPN1L	56	62.987	ENSGALG00000006242	PABPN1L	68	72.269	Gallus_gallus
ENSCPOG00000025951	PABPN1L	55	50.323	ENSGACG00000015428	PABPN1L	59	50.311	Gasterosteus_aculeatus
ENSCPOG00000025951	PABPN1L	66	57.459	ENSGAGG00000010613	PABPN1L	52	59.006	Gopherus_agassizii
ENSCPOG00000025951	PABPN1L	100	67.273	ENSGGOG00000012670	PABPN1L	100	68.364	Gorilla_gorilla
ENSCPOG00000025951	PABPN1L	56	54.545	ENSHBUG00000002388	PABPN1L	71	47.120	Haplochromis_burtoni
ENSCPOG00000025951	PABPN1L	96	81.226	ENSHGLG00000014207	PABPN1L	96	80.556	Heterocephalus_glaber_female
ENSCPOG00000025951	PABPN1L	96	81.226	ENSHGLG00100005230	PABPN1L	96	80.556	Heterocephalus_glaber_male
ENSCPOG00000025951	PABPN1L	100	67.742	ENSSTOG00000020814	PABPN1L	93	69.261	Ictidomys_tridecemlineatus
ENSCPOG00000025951	PABPN1L	100	66.182	ENSJJAG00000006433	Pabpn1l	100	65.091	Jaculus_jaculus
ENSCPOG00000025951	PABPN1L	59	48.466	ENSLBEG00000011647	PABPN1L	69	46.114	Labrus_bergylta
ENSCPOG00000025951	PABPN1L	71	65.306	ENSLAFG00000025902	-	78	63.776	Loxodonta_africana
ENSCPOG00000025951	PABPN1L	100	67.273	ENSMFAG00000002924	PABPN1L	100	68.000	Macaca_fascicularis
ENSCPOG00000025951	PABPN1L	100	66.545	ENSMMUG00000012438	PABPN1L	100	67.273	Macaca_mulatta
ENSCPOG00000025951	PABPN1L	100	67.273	ENSMNEG00000044808	PABPN1L	100	68.000	Macaca_nemestrina
ENSCPOG00000025951	PABPN1L	100	67.636	ENSMLEG00000032667	PABPN1L	100	68.364	Mandrillus_leucophaeus
ENSCPOG00000025951	PABPN1L	73	46.269	ENSMZEG00005002186	PABPN1L	71	47.644	Maylandia_zebra
ENSCPOG00000025951	PABPN1L	100	65.568	ENSMAUG00000014032	Pabpn1l	100	66.300	Mesocricetus_auratus
ENSCPOG00000025951	PABPN1L	100	71.636	ENSMICG00000028179	PABPN1L	100	71.273	Microcebus_murinus
ENSCPOG00000025951	PABPN1L	100	67.766	ENSMOCG00000007955	Pabpn1l	100	67.399	Microtus_ochrogaster
ENSCPOG00000025951	PABPN1L	100	51.439	ENSMODG00000003873	-	100	49.819	Monodelphis_domestica
ENSCPOG00000025951	PABPN1L	100	63.869	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	63.504	Mus_caroli
ENSCPOG00000025951	PABPN1L	100	63.869	ENSMUSG00000069867	Pabpn1l	100	63.504	Mus_musculus
ENSCPOG00000025951	PABPN1L	100	63.177	MGP_PahariEiJ_G0023268	Pabpn1l	100	62.774	Mus_pahari
ENSCPOG00000025951	PABPN1L	100	63.139	MGP_SPRETEiJ_G0032788	Pabpn1l	100	62.774	Mus_spretus
ENSCPOG00000025951	PABPN1L	96	51.852	ENSMLUG00000003228	PABPN1L	82	54.077	Myotis_lucifugus
ENSCPOG00000025951	PABPN1L	100	70.330	ENSNGAG00000023992	Pabpn1l	100	70.330	Nannospalax_galili
ENSCPOG00000025951	PABPN1L	56	54.545	ENSNBRG00000017078	PABPN1L	50	62.712	Neolamprologus_brichardi
ENSCPOG00000025951	PABPN1L	100	68.248	ENSOPRG00000005597	PABPN1L	100	67.153	Ochotona_princeps
ENSCPOG00000025951	PABPN1L	100	75.610	ENSODEG00000004649	PABPN1L	100	73.171	Octodon_degus
ENSCPOG00000025951	PABPN1L	100	51.095	ENSOANG00000013901	PABPN1L	85	52.941	Ornithorhynchus_anatinus
ENSCPOG00000025951	PABPN1L	76	46.635	ENSORLG00000026560	PABPN1L	62	49.405	Oryzias_latipes
ENSCPOG00000025951	PABPN1L	75	47.087	ENSORLG00020015068	PABPN1L	62	49.405	Oryzias_latipes_hni
ENSCPOG00000025951	PABPN1L	76	46.635	ENSORLG00015000397	PABPN1L	62	49.405	Oryzias_latipes_hsok
ENSCPOG00000025951	PABPN1L	100	71.636	ENSOGAG00000000433	PABPN1L	100	71.636	Otolemur_garnettii
ENSCPOG00000025951	PABPN1L	100	62.706	ENSOARG00000013682	PABPN1L	100	63.366	Ovis_aries
ENSCPOG00000025951	PABPN1L	100	67.742	ENSPPAG00000028866	PABPN1L	100	67.626	Pan_paniscus
ENSCPOG00000025951	PABPN1L	100	67.742	ENSPPRG00000015106	PABPN1L	100	67.742	Panthera_pardus
ENSCPOG00000025951	PABPN1L	93	62.109	ENSPTIG00000015606	PABPN1L	98	62.451	Panthera_tigris_altaica
ENSCPOG00000025951	PABPN1L	100	67.742	ENSPTRG00000031120	PABPN1L	100	67.626	Pan_troglodytes
ENSCPOG00000025951	PABPN1L	100	67.273	ENSPANG00000026039	PABPN1L	100	68.000	Papio_anubis
ENSCPOG00000025951	PABPN1L	58	56.707	ENSPSIG00000003404	PABPN1L	91	53.591	Pelodiscus_sinensis
ENSCPOG00000025951	PABPN1L	50	54.225	ENSPMGG00000013927	PABPN1L	60	65.686	Periophthalmus_magnuspinnatus
ENSCPOG00000025951	PABPN1L	100	67.399	ENSPEMG00000016624	Pabpn1l	100	67.399	Peromyscus_maniculatus_bairdii
ENSCPOG00000025951	PABPN1L	51	62.143	ENSPCIG00000007038	-	97	60.000	Phascolarctos_cinereus
ENSCPOG00000025951	PABPN1L	100	67.626	ENSPPYG00000007655	PABPN1L	100	67.626	Pongo_abelii
ENSCPOG00000025951	PABPN1L	100	69.455	ENSPCOG00000024077	PABPN1L	100	68.727	Propithecus_coquereli
ENSCPOG00000025951	PABPN1L	100	65.248	ENSPVAG00000002716	PABPN1L	100	64.894	Pteropus_vampyrus
ENSCPOG00000025951	PABPN1L	73	46.269	ENSPNYG00000004803	PABPN1L	71	47.644	Pundamilia_nyererei
ENSCPOG00000025951	PABPN1L	100	69.597	ENSRNOG00000029558	Pabpn1l	100	69.231	Rattus_norvegicus
ENSCPOG00000025951	PABPN1L	100	68.727	ENSRBIG00000030740	PABPN1L	100	69.455	Rhinopithecus_bieti
ENSCPOG00000025951	PABPN1L	99	67.153	ENSRROG00000035483	-	99	67.518	Rhinopithecus_roxellana
ENSCPOG00000025951	PABPN1L	100	68.116	ENSRROG00000032240	-	100	69.091	Rhinopithecus_roxellana
ENSCPOG00000025951	PABPN1L	100	65.217	ENSSBOG00000018410	PABPN1L	100	63.768	Saimiri_boliviensis_boliviensis
ENSCPOG00000025951	PABPN1L	100	49.829	ENSSHAG00000010001	-	100	47.440	Sarcophilus_harrisii
ENSCPOG00000025951	PABPN1L	88	50.628	ENSSARG00000005178	-	95	49.372	Sorex_araneus
ENSCPOG00000025951	PABPN1L	70	57.513	ENSSPUG00000007031	PABPN1L	68	60.625	Sphenodon_punctatus
ENSCPOG00000025951	PABPN1L	74	46.040	ENSSPAG00000017978	PABPN1L	71	46.597	Stegastes_partitus
ENSCPOG00000025951	PABPN1L	100	59.498	ENSSSCG00000036367	PABPN1L	90	65.060	Sus_scrofa
ENSCPOG00000025951	PABPN1L	62	47.977	ENSTRUG00000024725	PABPN1L	77	47.090	Takifugu_rubripes
ENSCPOG00000025951	PABPN1L	100	64.388	ENSTTRG00000004691	PABPN1L	100	64.516	Tursiops_truncatus
ENSCPOG00000025951	PABPN1L	55	53.459	ENSXETG00000011258	pabpn1l	81	49.718	Xenopus_tropicalis