EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000026072 (Gene tree)
Gene ID: 100731116
Gene Symbol: -
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 6653 bases
Position: chrDS562872.1:22126573-22133225
Accession: 100731116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027408	Nop16	PF09420.10	1.2e-22	1	2
ENSCPOP00000027408	Nop16	PF09420.10	1.2e-22	2	2
ENSCPOP00000017938	Nop16	PF09420.10	1.3e-22	1	2
ENSCPOP00000017938	Nop16	PF09420.10	1.3e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000024758	-	543	-	ENSCPOP00000017938	181 (aa)	-	H0W4N7
ENSCPOT00000034063	-	1074	XM_003473229	ENSCPOP00000027408	178 (aa)	XP_003473277	A0A286XPV2

Gene Model

Click here to download ENSCPOG00000026072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000026072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000026072	-	96	52.941	ENSAPOG00000010682	-	98	52.299	Acanthochromis_polyacanthus
ENSCPOG00000026072	-	100	92.697	ENSAMEG00000006988	-	100	92.697	Ailuropoda_melanoleuca
ENSCPOG00000026072	-	96	52.941	ENSACIG00000019263	nop16	97	52.907	Amphilophus_citrinellus
ENSCPOG00000026072	-	96	54.118	ENSAOCG00000005504	nop16	98	53.448	Amphiprion_ocellaris
ENSCPOG00000026072	-	96	54.118	ENSAPEG00000006605	nop16	98	53.448	Amphiprion_percula
ENSCPOG00000026072	-	96	53.529	ENSATEG00000014089	nop16	95	53.529	Anabas_testudineus
ENSCPOG00000026072	-	99	71.591	ENSACAG00000006333	-	99	71.591	Anolis_carolinensis
ENSCPOG00000026072	-	100	88.202	ENSANAG00000015743	-	100	88.202	Aotus_nancymaae
ENSCPOG00000026072	-	100	83.146	ENSANAG00000027410	-	100	83.146	Aotus_nancymaae
ENSCPOG00000026072	-	96	53.529	ENSACLG00000025227	nop16	95	53.529	Astatotilapia_calliptera
ENSCPOG00000026072	-	94	45.509	ENSAMXG00000006843	nop16	95	45.509	Astyanax_mexicanus
ENSCPOG00000026072	-	100	92.697	ENSBTAG00000010734	NOP16	100	92.697	Bos_taurus
ENSCPOG00000026072	-	66	32.374	WBGene00013958	ZK265.6	85	30.058	Caenorhabditis_elegans
ENSCPOG00000026072	-	100	91.573	ENSCAFG00000016694	NOP16	100	91.573	Canis_familiaris
ENSCPOG00000026072	-	99	91.477	ENSCAFG00020011505	-	94	91.477	Canis_lupus_dingo
ENSCPOG00000026072	-	100	92.697	ENSCHIG00000022082	-	100	92.697	Capra_hircus
ENSCPOG00000026072	-	99	90.395	ENSTSYG00000030409	-	99	90.395	Carlito_syrichta
ENSCPOG00000026072	-	100	74.719	ENSTSYG00000032690	-	100	74.719	Carlito_syrichta
ENSCPOG00000026072	-	96	79.769	ENSCCAG00000026775	-	100	79.769	Cebus_capucinus
ENSCPOG00000026072	-	100	94.382	ENSCLAG00000015405	-	100	94.382	Chinchilla_lanigera
ENSCPOG00000026072	-	100	92.697	ENSCSAG00000009400	-	100	92.697	Chlorocebus_sabaeus
ENSCPOG00000026072	-	99	73.596	ENSCPBG00000022647	-	99	73.596	Chrysemys_picta_bellii
ENSCPOG00000026072	-	96	45.198	ENSCING00000006179	-	95	45.198	Ciona_intestinalis
ENSCPOG00000026072	-	95	42.353	ENSCSAVG00000000269	-	93	42.353	Ciona_savignyi
ENSCPOG00000026072	-	100	91.011	ENSCGRG00001004259	Nop16	100	91.011	Cricetulus_griseus_chok1gshd
ENSCPOG00000026072	-	100	91.011	ENSCGRG00000010975	Nop16	100	91.011	Cricetulus_griseus_crigri
ENSCPOG00000026072	-	96	51.176	ENSCSEG00000020523	nop16	97	51.176	Cynoglossus_semilaevis
ENSCPOG00000026072	-	97	52.542	ENSCVAG00000020140	nop16	99	52.542	Cyprinodon_variegatus
ENSCPOG00000026072	-	98	49.718	ENSDARG00000044402	nop16	99	49.718	Danio_rerio
ENSCPOG00000026072	-	100	91.011	ENSDNOG00000042890	-	100	91.011	Dasypus_novemcinctus
ENSCPOG00000026072	-	100	88.202	ENSDORG00000008872	Nop16	100	88.202	Dipodomys_ordii
ENSCPOG00000026072	-	93	43.750	ENSEBUG00000011196	nop16	95	43.750	Eptatretus_burgeri
ENSCPOG00000026072	-	100	94.382	ENSEASG00005011988	-	100	94.382	Equus_asinus_asinus
ENSCPOG00000026072	-	100	94.382	ENSECAG00000021354	NOP16	100	94.382	Equus_caballus
ENSCPOG00000026072	-	98	53.714	ENSELUG00000000401	nop16	98	53.714	Esox_lucius
ENSCPOG00000026072	-	100	93.258	ENSFCAG00000025473	-	100	93.258	Felis_catus
ENSCPOG00000026072	-	100	65.556	ENSFALG00000008553	-	100	65.556	Ficedula_albicollis
ENSCPOG00000026072	-	100	92.697	ENSFDAG00000000193	-	100	92.697	Fukomys_damarensis
ENSCPOG00000026072	-	96	54.706	ENSFHEG00000016452	nop16	95	54.706	Fundulus_heteroclitus
ENSCPOG00000026072	-	100	71.667	ENSGALG00000003355	-	100	71.667	Gallus_gallus
ENSCPOG00000026072	-	85	53.247	ENSGAFG00000011616	nop16	83	53.247	Gambusia_affinis
ENSCPOG00000026072	-	96	52.353	ENSGACG00000002618	-	98	52.353	Gasterosteus_aculeatus
ENSCPOG00000026072	-	96	51.765	ENSGACG00000020819	-	98	51.765	Gasterosteus_aculeatus
ENSCPOG00000026072	-	96	47.647	ENSGACG00000020810	nop16	100	47.647	Gasterosteus_aculeatus
ENSCPOG00000026072	-	96	51.744	ENSGACG00000003122	-	97	53.913	Gasterosteus_aculeatus
ENSCPOG00000026072	-	96	54.118	ENSHBUG00000013527	nop16	95	54.118	Haplochromis_burtoni
ENSCPOG00000026072	-	100	94.382	ENSHGLG00000013437	NOP16	100	94.382	Heterocephalus_glaber_female
ENSCPOG00000026072	-	100	94.382	ENSHGLG00100011375	NOP16	100	94.382	Heterocephalus_glaber_male
ENSCPOG00000026072	-	96	50.000	ENSHCOG00000019999	nop16	98	49.419	Hippocampus_comes
ENSCPOG00000026072	-	97	46.857	ENSIPUG00000006682	nop16	99	46.857	Ictalurus_punctatus
ENSCPOG00000026072	-	100	91.111	ENSSTOG00000004869	-	100	91.111	Ictidomys_tridecemlineatus
ENSCPOG00000026072	-	100	91.011	ENSJJAG00000017655	Nop16	100	91.011	Jaculus_jaculus
ENSCPOG00000026072	-	96	55.882	ENSKMAG00000006164	nop16	95	55.882	Kryptolebias_marmoratus
ENSCPOG00000026072	-	97	51.412	ENSLBEG00000018355	nop16	81	51.412	Labrus_bergylta
ENSCPOG00000026072	-	99	61.582	ENSLACG00000014884	nop16	100	61.582	Latimeria_chalumnae
ENSCPOG00000026072	-	99	55.932	ENSLOCG00000012348	nop16	98	56.497	Lepisosteus_oculatus
ENSCPOG00000026072	-	100	91.573	ENSLAFG00000017886	-	100	91.573	Loxodonta_africana
ENSCPOG00000026072	-	98	54.494	ENSMAMG00000021868	nop16	100	54.494	Mastacembelus_armatus
ENSCPOG00000026072	-	96	53.529	ENSMZEG00005012112	nop16	95	53.529	Maylandia_zebra
ENSCPOG00000026072	-	57	67.647	ENSMGAG00000004726	-	100	67.647	Meleagris_gallopavo
ENSCPOG00000026072	-	60	89.623	ENSMAUG00000009852	-	100	89.623	Mesocricetus_auratus
ENSCPOG00000026072	-	94	81.548	ENSMAUG00000015569	-	99	81.548	Mesocricetus_auratus
ENSCPOG00000026072	-	100	92.135	ENSMOCG00000020788	Nop16	100	92.135	Microtus_ochrogaster
ENSCPOG00000026072	-	96	51.765	ENSMMOG00000016054	nop16	99	51.765	Mola_mola
ENSCPOG00000026072	-	100	79.444	ENSMODG00000005214	-	100	79.444	Monodelphis_domestica
ENSCPOG00000026072	-	96	51.765	ENSMALG00000021263	nop16	95	51.765	Monopterus_albus
ENSCPOG00000026072	-	100	89.888	MGP_CAROLIEiJ_G0018538	Nop16	100	89.888	Mus_caroli
ENSCPOG00000026072	-	100	90.449	ENSMUSG00000025869	Nop16	100	90.449	Mus_musculus
ENSCPOG00000026072	-	100	90.449	MGP_PahariEiJ_G0019603	Nop16	100	90.449	Mus_pahari
ENSCPOG00000026072	-	100	89.888	MGP_SPRETEiJ_G0019418	Nop16	100	89.888	Mus_spretus
ENSCPOG00000026072	-	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
ENSCPOG00000026072	-	100	93.258	ENSMPUG00000012552	-	100	93.258	Mustela_putorius_furo
ENSCPOG00000026072	-	99	89.266	ENSMLUG00000003504	-	99	89.266	Myotis_lucifugus
ENSCPOG00000026072	-	100	92.697	ENSNGAG00000018045	Nop16	100	92.697	Nannospalax_galili
ENSCPOG00000026072	-	96	53.529	ENSNBRG00000015181	nop16	96	53.529	Neolamprologus_brichardi
ENSCPOG00000026072	-	100	97.191	ENSODEG00000009586	-	100	97.191	Octodon_degus
ENSCPOG00000026072	-	96	55.294	ENSONIG00000016417	nop16	95	55.294	Oreochromis_niloticus
ENSCPOG00000026072	-	100	90.449	ENSOCUG00000013171	-	100	90.449	Oryctolagus_cuniculus
ENSCPOG00000026072	-	96	55.294	ENSORLG00000026611	nop16	95	55.294	Oryzias_latipes
ENSCPOG00000026072	-	96	57.059	ENSOMEG00000023001	nop16	95	57.059	Oryzias_melastigma
ENSCPOG00000026072	-	100	92.697	ENSOGAG00000000824	-	100	92.697	Otolemur_garnettii
ENSCPOG00000026072	-	100	92.697	ENSOARG00000002165	-	100	92.697	Ovis_aries
ENSCPOG00000026072	-	100	91.011	ENSPPAG00000035473	-	100	91.011	Pan_paniscus
ENSCPOG00000026072	-	100	93.258	ENSPPRG00000016600	-	100	93.258	Panthera_pardus
ENSCPOG00000026072	-	100	92.697	ENSPTIG00000011708	-	100	92.697	Panthera_tigris_altaica
ENSCPOG00000026072	-	100	91.011	ENSPTRG00000017560	NOP16	100	91.011	Pan_troglodytes
ENSCPOG00000026072	-	99	54.237	ENSPKIG00000009587	nop16	99	55.114	Paramormyrops_kingsleyae
ENSCPOG00000026072	-	79	69.014	ENSPSIG00000013546	-	99	69.014	Pelodiscus_sinensis
ENSCPOG00000026072	-	94	53.846	ENSPMGG00000003443	nop16	98	53.846	Periophthalmus_magnuspinnatus
ENSCPOG00000026072	-	100	92.135	ENSPEMG00000020268	Nop16	100	92.135	Peromyscus_maniculatus_bairdii
ENSCPOG00000026072	-	100	82.222	ENSPCIG00000009782	-	100	82.222	Phascolarctos_cinereus
ENSCPOG00000026072	-	96	52.941	ENSPFOG00000010549	nop16	95	52.941	Poecilia_formosa
ENSCPOG00000026072	-	77	53.285	ENSPLAG00000007124	nop16	70	53.285	Poecilia_latipinna
ENSCPOG00000026072	-	96	52.941	ENSPMEG00000008611	nop16	95	52.941	Poecilia_mexicana
ENSCPOG00000026072	-	96	52.941	ENSPREG00000012940	nop16	97	52.907	Poecilia_reticulata
ENSCPOG00000026072	-	99	90.960	ENSPPYG00000016070	-	99	90.960	Pongo_abelii
ENSCPOG00000026072	-	96	53.529	ENSPNYG00000013529	nop16	95	53.529	Pundamilia_nyererei
ENSCPOG00000026072	-	93	50.000	ENSPNAG00000016233	nop16	95	50.000	Pygocentrus_nattereri
ENSCPOG00000026072	-	100	91.011	ENSRNOG00000017284	Nop16	100	91.011	Rattus_norvegicus
ENSCPOG00000026072	-	100	81.564	ENSSHAG00000001724	-	100	81.564	Sarcophilus_harrisii
ENSCPOG00000026072	-	90	50.625	ENSSFOG00015010537	nop16	78	49.711	Scleropages_formosus
ENSCPOG00000026072	-	96	53.529	ENSSDUG00000022349	nop16	95	53.529	Seriola_dumerili
ENSCPOG00000026072	-	96	53.529	ENSSLDG00000025171	nop16	95	53.529	Seriola_lalandi_dorsalis
ENSCPOG00000026072	-	73	76.154	ENSSARG00000006699	-	61	76.154	Sorex_araneus
ENSCPOG00000026072	-	99	72.159	ENSSPUG00000006508	-	99	71.186	Sphenodon_punctatus
ENSCPOG00000026072	-	96	55.294	ENSSPAG00000011772	nop16	95	55.294	Stegastes_partitus
ENSCPOG00000026072	-	100	91.573	ENSSSCG00000029577	-	100	91.573	Sus_scrofa
ENSCPOG00000026072	-	100	69.444	ENSTGUG00000000543	-	100	69.444	Taeniopygia_guttata
ENSCPOG00000026072	-	98	51.955	ENSTRUG00000020255	nop16	100	51.955	Takifugu_rubripes
ENSCPOG00000026072	-	96	54.971	ENSTNIG00000007616	nop16	95	54.971	Tetraodon_nigroviridis
ENSCPOG00000026072	-	100	92.135	ENSUAMG00000005139	-	100	92.135	Ursus_americanus
ENSCPOG00000026072	-	99	92.045	ENSVVUG00000001697	-	94	92.045	Vulpes_vulpes
ENSCPOG00000026072	-	92	58.896	ENSXETG00000022342	nop16	95	58.896	Xenopus_tropicalis
ENSCPOG00000026072	-	96	53.801	ENSXCOG00000018829	nop16	97	53.801	Xiphophorus_couchianus
ENSCPOG00000026072	-	96	54.386	ENSXMAG00000029113	nop16	95	54.386	Xiphophorus_maculatus