EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000026322 (Gene tree)
Gene ID: 100718986
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 26108 bases
Position: chrDS563189.1:43274-69381
Accession: 100718986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017908	RRM_1	PF00076.22	4e-13	1	1
ENSCPOP00000017908	SAP	PF02037.27	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000024904	SAFB-201	2817	XM_013146304	ENSCPOP00000017908	938 (aa)	XP_013001758	H0W4K7

Gene Model

Click here to download ENSCPOG00000026322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000026322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000026322	SAFB	100	62.249	ENSCPOG00000011394	SAFB2	65	66.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000026322	SAFB	100	87.261	ENSG00000160633	SAFB	100	87.473	Homo_sapiens
ENSCPOG00000026322	SAFB	100	86.653	ENSAMEG00000012254	SAFB	100	86.017	Ailuropoda_melanoleuca
ENSCPOG00000026322	SAFB	90	60.976	ENSAPLG00000006355	-	65	57.391	Anas_platyrhynchos
ENSCPOG00000026322	SAFB	94	61.279	ENSAPLG00000005780	-	100	61.392	Anas_platyrhynchos
ENSCPOG00000026322	SAFB	100	86.624	ENSANAG00000028821	SAFB	100	86.837	Aotus_nancymaae
ENSCPOG00000026322	SAFB	100	83.953	ENSBTAG00000007875	SAFB	100	83.953	Bos_taurus
ENSCPOG00000026322	SAFB	81	92.453	ENSCJAG00000017081	SAFB	100	92.453	Callithrix_jacchus
ENSCPOG00000026322	SAFB	100	88.004	ENSCAFG00000018803	SAFB	87	88.110	Canis_familiaris
ENSCPOG00000026322	SAFB	100	88.004	ENSCAFG00020018943	SAFB	100	88.110	Canis_lupus_dingo
ENSCPOG00000026322	SAFB	100	82.784	ENSCHIG00000007262	SAFB	98	89.623	Capra_hircus
ENSCPOG00000026322	SAFB	57	76.173	ENSTSYG00000001851	-	53	88.519	Carlito_syrichta
ENSCPOG00000026322	SAFB	89	88.384	ENSCAPG00000012121	SAFB	100	97.980	Cavia_aperea
ENSCPOG00000026322	SAFB	100	86.638	ENSCCAG00000020193	SAFB	100	86.426	Cebus_capucinus
ENSCPOG00000026322	SAFB	100	87.367	ENSCATG00000029994	SAFB	100	87.580	Cercocebus_atys
ENSCPOG00000026322	SAFB	100	92.553	ENSCLAG00000007734	SAFB	100	94.043	Chinchilla_lanigera
ENSCPOG00000026322	SAFB	100	87.261	ENSCSAG00000009949	SAFB	100	87.473	Chlorocebus_sabaeus
ENSCPOG00000026322	SAFB	87	83.333	ENSCHOG00000003208	SAFB	93	88.095	Choloepus_hoffmanni
ENSCPOG00000026322	SAFB	91	61.521	ENSCPBG00000010928	-	62	57.299	Chrysemys_picta_bellii
ENSCPOG00000026322	SAFB	91	57.969	ENSCPBG00000010936	-	62	54.922	Chrysemys_picta_bellii
ENSCPOG00000026322	SAFB	98	83.636	ENSCANG00000004774	-	100	85.714	Colobus_angolensis_palliatus
ENSCPOG00000026322	SAFB	100	81.423	ENSCANG00000019754	-	100	81.635	Colobus_angolensis_palliatus
ENSCPOG00000026322	SAFB	100	84.567	ENSCGRG00001002254	Safb	100	84.778	Cricetulus_griseus_chok1gshd
ENSCPOG00000026322	SAFB	90	81.932	ENSCGRG00000011529	Safb	96	82.159	Cricetulus_griseus_crigri
ENSCPOG00000026322	SAFB	57	48.308	ENSCSEG00000019870	safb	50	51.923	Cynoglossus_semilaevis
ENSCPOG00000026322	SAFB	51	48.406	ENSDARG00000020467	safb	60	55.833	Danio_rerio
ENSCPOG00000026322	SAFB	100	85.881	ENSDNOG00000015746	SAFB	95	85.524	Dasypus_novemcinctus
ENSCPOG00000026322	SAFB	100	83.228	ENSDORG00000016200	Safb	100	83.386	Dipodomys_ordii
ENSCPOG00000026322	SAFB	80	80.000	ENSETEG00000018679	SAFB	77	83.465	Echinops_telfairi
ENSCPOG00000026322	SAFB	100	84.794	ENSEASG00005023019	SAFB	100	84.161	Equus_asinus_asinus
ENSCPOG00000026322	SAFB	100	86.518	ENSECAG00000018659	SAFB	89	86.730	Equus_caballus
ENSCPOG00000026322	SAFB	96	43.723	ENSELUG00000022327	safb	86	50.698	Esox_lucius
ENSCPOG00000026322	SAFB	100	87.885	ENSFCAG00000011835	SAFB	100	87.991	Felis_catus
ENSCPOG00000026322	SAFB	100	61.740	ENSFALG00000013882	-	92	61.094	Ficedula_albicollis
ENSCPOG00000026322	SAFB	91	56.575	ENSFALG00000013881	-	63	55.382	Ficedula_albicollis
ENSCPOG00000026322	SAFB	96	86.241	ENSFDAG00000020306	SAFB	99	92.283	Fukomys_damarensis
ENSCPOG00000026322	SAFB	100	62.632	ENSGALG00000013365	-	100	61.474	Gallus_gallus
ENSCPOG00000026322	SAFB	96	59.832	ENSGAGG00000008424	-	67	57.298	Gopherus_agassizii
ENSCPOG00000026322	SAFB	100	87.049	ENSGGOG00000015109	SAFB	100	87.261	Gorilla_gorilla
ENSCPOG00000026322	SAFB	100	93.610	ENSHGLG00000015883	SAFB	100	93.610	Heterocephalus_glaber_female
ENSCPOG00000026322	SAFB	100	75.263	ENSHGLG00100004228	SAFB	100	93.720	Heterocephalus_glaber_male
ENSCPOG00000026322	SAFB	51	46.627	ENSHCOG00000001705	safb	52	52.852	Hippocampus_comes
ENSCPOG00000026322	SAFB	97	44.909	ENSIPUG00000024869	safb2	63	45.041	Ictalurus_punctatus
ENSCPOG00000026322	SAFB	93	90.308	ENSSTOG00000002783	SAFB	100	90.536	Ictidomys_tridecemlineatus
ENSCPOG00000026322	SAFB	100	87.302	ENSJJAG00000009021	Safb	100	86.984	Jaculus_jaculus
ENSCPOG00000026322	SAFB	65	48.742	ENSLACG00000018090	SAFB	66	49.533	Latimeria_chalumnae
ENSCPOG00000026322	SAFB	99	84.009	ENSLAFG00000003840	SAFB	100	83.689	Loxodonta_africana
ENSCPOG00000026322	SAFB	100	87.275	ENSMFAG00000003885	SAFB	100	87.063	Macaca_fascicularis
ENSCPOG00000026322	SAFB	100	87.367	ENSMMUG00000017970	SAFB	100	87.580	Macaca_mulatta
ENSCPOG00000026322	SAFB	100	83.669	ENSMNEG00000035637	SAFB	100	84.328	Macaca_nemestrina
ENSCPOG00000026322	SAFB	100	81.818	ENSMLEG00000038637	SAFB	100	80.649	Mandrillus_leucophaeus
ENSCPOG00000026322	SAFB	89	57.377	ENSMGAG00000001051	-	100	57.260	Meleagris_gallopavo
ENSCPOG00000026322	SAFB	97	59.891	ENSMGAG00000001101	-	100	58.651	Meleagris_gallopavo
ENSCPOG00000026322	SAFB	52	90.329	ENSMAUG00000005013	Safb	100	90.741	Mesocricetus_auratus
ENSCPOG00000026322	SAFB	100	83.864	ENSMICG00000008739	-	100	82.803	Microcebus_murinus
ENSCPOG00000026322	SAFB	85	73.756	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSCPOG00000026322	SAFB	100	84.372	ENSMOCG00000014040	Safb	100	84.583	Microtus_ochrogaster
ENSCPOG00000026322	SAFB	100	70.717	ENSMODG00000001236	SAFB	100	70.301	Monodelphis_domestica
ENSCPOG00000026322	SAFB	100	85.307	MGP_CAROLIEiJ_G0021780	Safb	100	85.307	Mus_caroli
ENSCPOG00000026322	SAFB	100	85.307	ENSMUSG00000071054	Safb	100	85.307	Mus_musculus
ENSCPOG00000026322	SAFB	100	85.095	MGP_PahariEiJ_G0020769	Safb	100	85.095	Mus_pahari
ENSCPOG00000026322	SAFB	100	87.155	ENSMPUG00000006123	SAFB	94	87.155	Mustela_putorius_furo
ENSCPOG00000026322	SAFB	100	87.049	ENSMLUG00000001081	SAFB	100	87.049	Myotis_lucifugus
ENSCPOG00000026322	SAFB	100	83.650	ENSNGAG00000019882	Safb	100	83.544	Nannospalax_galili
ENSCPOG00000026322	SAFB	96	87.500	ENSNLEG00000013551	SAFB	100	87.058	Nomascus_leucogenys
ENSCPOG00000026322	SAFB	89	81.818	ENSOPRG00000011561	-	100	82.416	Ochotona_princeps
ENSCPOG00000026322	SAFB	100	94.894	ENSODEG00000014838	SAFB	100	94.894	Octodon_degus
ENSCPOG00000026322	SAFB	91	77.491	ENSOCUG00000014628	SAFB	63	80.331	Oryctolagus_cuniculus
ENSCPOG00000026322	SAFB	77	50.192	ENSORLG00020000404	safb	51	56.148	Oryzias_latipes_hni
ENSCPOG00000026322	SAFB	100	81.924	ENSOGAG00000027769	SAFB	100	81.395	Otolemur_garnettii
ENSCPOG00000026322	SAFB	79	76.319	ENSOARG00000007856	-	100	76.049	Ovis_aries
ENSCPOG00000026322	SAFB	100	80.340	ENSOARG00000007662	-	100	78.427	Ovis_aries
ENSCPOG00000026322	SAFB	100	87.063	ENSPPAG00000035129	SAFB	100	86.850	Pan_paniscus
ENSCPOG00000026322	SAFB	100	87.885	ENSPPRG00000017197	SAFB	100	87.991	Panthera_pardus
ENSCPOG00000026322	SAFB	100	87.063	ENSPTRG00000010335	SAFB	100	86.850	Pan_troglodytes
ENSCPOG00000026322	SAFB	100	87.169	ENSPANG00000007770	SAFB	100	86.957	Papio_anubis
ENSCPOG00000026322	SAFB	100	59.404	ENSPSIG00000011679	-	64	58.136	Pelodiscus_sinensis
ENSCPOG00000026322	SAFB	99	59.609	ENSPSIG00000009367	-	63	56.019	Pelodiscus_sinensis
ENSCPOG00000026322	SAFB	100	84.672	ENSPEMG00000020428	Safb	100	84.884	Peromyscus_maniculatus_bairdii
ENSCPOG00000026322	SAFB	57	77.819	ENSPCIG00000009504	-	100	77.819	Phascolarctos_cinereus
ENSCPOG00000026322	SAFB	71	46.012	ENSPFOG00000007745	safb	53	51.087	Poecilia_formosa
ENSCPOG00000026322	SAFB	73	45.399	ENSPMEG00000021023	safb	53	52.569	Poecilia_mexicana
ENSCPOG00000026322	SAFB	71	45.735	ENSPREG00000012496	safb	51	52.174	Poecilia_reticulata
ENSCPOG00000026322	SAFB	100	87.261	ENSPPYG00000009428	SAFB	100	87.473	Pongo_abelii
ENSCPOG00000026322	SAFB	100	81.403	ENSPCAG00000006475	SAFB	100	81.403	Procavia_capensis
ENSCPOG00000026322	SAFB	100	79.894	ENSPCOG00000014090	SAFB	100	77.176	Propithecus_coquereli
ENSCPOG00000026322	SAFB	100	79.193	ENSPVAG00000004913	SAFB	100	79.724	Pteropus_vampyrus
ENSCPOG00000026322	SAFB	100	84.705	ENSRNOG00000050543	Safb	100	84.810	Rattus_norvegicus
ENSCPOG00000026322	SAFB	96	81.560	ENSRBIG00000042509	SAFB	100	75.372	Rhinopithecus_bieti
ENSCPOG00000026322	SAFB	100	87.169	ENSRROG00000029278	SAFB	100	86.957	Rhinopithecus_roxellana
ENSCPOG00000026322	SAFB	100	86.730	ENSSBOG00000026291	SAFB	100	86.943	Saimiri_boliviensis_boliviensis
ENSCPOG00000026322	SAFB	93	80.795	ENSSARG00000010475	SAFB	100	80.455	Sorex_araneus
ENSCPOG00000026322	SAFB	87	54.524	ENSSPUG00000009747	-	65	52.381	Sphenodon_punctatus
ENSCPOG00000026322	SAFB	54	52.593	ENSSPUG00000009820	-	64	53.321	Sphenodon_punctatus
ENSCPOG00000026322	SAFB	68	50.579	ENSSPAG00000015682	safb	56	59.184	Stegastes_partitus
ENSCPOG00000026322	SAFB	100	86.254	ENSSSCG00000013522	SAFB	99	87.157	Sus_scrofa
ENSCPOG00000026322	SAFB	96	60.960	ENSTGUG00000000502	-	97	61.685	Taeniopygia_guttata
ENSCPOG00000026322	SAFB	93	58.980	ENSTGUG00000000489	-	68	59.032	Taeniopygia_guttata
ENSCPOG00000026322	SAFB	67	85.714	ENSTBEG00000013124	-	74	90.226	Tupaia_belangeri
ENSCPOG00000026322	SAFB	92	96.825	ENSTTRG00000013588	SAFB	92	96.825	Tursiops_truncatus
ENSCPOG00000026322	SAFB	80	83.687	ENSUAMG00000024543	SAFB	100	79.877	Ursus_americanus
ENSCPOG00000026322	SAFB	89	84.567	ENSUMAG00000009734	SAFB	96	84.615	Ursus_maritimus
ENSCPOG00000026322	SAFB	69	91.304	ENSVPAG00000012043	SAFB	79	89.231	Vicugna_pacos
ENSCPOG00000026322	SAFB	100	87.898	ENSVVUG00000013720	SAFB	87	88.004	Vulpes_vulpes
ENSCPOG00000026322	SAFB	67	48.811	ENSXETG00000008755	safb	64	64.368	Xenopus_tropicalis
ENSCPOG00000026322	SAFB	77	45.122	ENSXMAG00000003458	safb	50	51.779	Xiphophorus_maculatus