EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000026520 (Gene tree)
Gene ID: 100734337
Gene Symbol: TRMT12
Alias: FLJ20772|TYW2|Trm12
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1329 bases
Position: chrDS562906.1:11332769-11334097
Accession: 100734337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021230	Met_10	PF02475.16	4.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000023989	TRMT12-201	1329	XM_005008685	ENSCPOP00000021230	442 (aa)	XP_005008742	H0WE06

Gene Model

Click here to download ENSCPOG00000026520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000026520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000026520	TRMT12	100	82.472	ENSG00000183665	TRMT12	98	88.095	Homo_sapiens
ENSCPOG00000026520	TRMT12	93	50.122	ENSAPOG00000011979	trmt12	97	50.122	Acanthochromis_polyacanthus
ENSCPOG00000026520	TRMT12	99	81.222	ENSAMEG00000019612	TRMT12	99	81.222	Ailuropoda_melanoleuca
ENSCPOG00000026520	TRMT12	91	49.257	ENSACIG00000012982	trmt12	99	49.257	Amphilophus_citrinellus
ENSCPOG00000026520	TRMT12	91	50.495	ENSAOCG00000020570	trmt12	96	51.538	Amphiprion_ocellaris
ENSCPOG00000026520	TRMT12	91	51.232	ENSAPEG00000006335	trmt12	96	51.795	Amphiprion_percula
ENSCPOG00000026520	TRMT12	93	51.456	ENSATEG00000018316	trmt12	97	51.456	Anabas_testudineus
ENSCPOG00000026520	TRMT12	93	50.365	ENSACLG00000001008	trmt12	97	50.365	Astatotilapia_calliptera
ENSCPOG00000026520	TRMT12	95	50.943	ENSAMXG00000040366	trmt12	99	50.943	Astyanax_mexicanus
ENSCPOG00000026520	TRMT12	100	78.153	ENSBTAG00000020398	TRMT12	96	78.153	Bos_taurus
ENSCPOG00000026520	TRMT12	50	38.182	WBGene00009586	F40F9.10	50	36.864	Caenorhabditis_elegans
ENSCPOG00000026520	TRMT12	100	80.899	ENSCJAG00000022174	TRMT12	99	80.899	Callithrix_jacchus
ENSCPOG00000026520	TRMT12	99	82.232	ENSCAFG00000001040	TRMT12	100	82.232	Canis_familiaris
ENSCPOG00000026520	TRMT12	99	82.232	ENSCAFG00020006500	TRMT12	100	82.232	Canis_lupus_dingo
ENSCPOG00000026520	TRMT12	98	79.954	ENSCHIG00000016574	TRMT12	99	79.954	Capra_hircus
ENSCPOG00000026520	TRMT12	100	81.798	ENSCSAG00000018615	TRMT12	99	81.798	Chlorocebus_sabaeus
ENSCPOG00000026520	TRMT12	96	62.273	ENSCPBG00000014290	TRMT12	96	62.273	Chrysemys_picta_bellii
ENSCPOG00000026520	TRMT12	70	45.048	ENSCING00000019633	-	97	45.048	Ciona_intestinalis
ENSCPOG00000026520	TRMT12	72	45.283	ENSCSAVG00000000415	-	93	45.283	Ciona_savignyi
ENSCPOG00000026520	TRMT12	98	59.864	ENSCGRG00001014834	Trmt12	99	59.864	Cricetulus_griseus_chok1gshd
ENSCPOG00000026520	TRMT12	93	50.365	ENSCSEG00000002675	trmt12	92	50.365	Cynoglossus_semilaevis
ENSCPOG00000026520	TRMT12	94	51.442	ENSCVAG00000005590	trmt12	97	51.442	Cyprinodon_variegatus
ENSCPOG00000026520	TRMT12	95	51.054	ENSDARG00000060338	trmt12	99	52.837	Danio_rerio
ENSCPOG00000026520	TRMT12	99	73.077	ENSETEG00000009373	TRMT12	99	73.077	Echinops_telfairi
ENSCPOG00000026520	TRMT12	99	81.549	ENSEASG00005022441	TRMT12	100	81.549	Equus_asinus_asinus
ENSCPOG00000026520	TRMT12	99	74.603	ENSEEUG00000004844	TRMT12	99	74.603	Erinaceus_europaeus
ENSCPOG00000026520	TRMT12	93	49.879	ENSELUG00000004240	trmt12	99	50.639	Esox_lucius
ENSCPOG00000026520	TRMT12	64	61.210	ENSFALG00000003825	TRMT12	94	68.447	Ficedula_albicollis
ENSCPOG00000026520	TRMT12	99	85.649	ENSFDAG00000016647	TRMT12	100	85.649	Fukomys_damarensis
ENSCPOG00000026520	TRMT12	91	43.704	ENSFHEG00000017338	trmt12	98	43.704	Fundulus_heteroclitus
ENSCPOG00000026520	TRMT12	81	62.778	ENSGALG00000006773	TRMT12	78	62.778	Gallus_gallus
ENSCPOG00000026520	TRMT12	93	49.635	ENSGAFG00000020056	trmt12	97	49.635	Gambusia_affinis
ENSCPOG00000026520	TRMT12	92	50.490	ENSGACG00000017351	trmt12	100	50.490	Gasterosteus_aculeatus
ENSCPOG00000026520	TRMT12	96	62.069	ENSGAGG00000006032	TRMT12	98	62.069	Gopherus_agassizii
ENSCPOG00000026520	TRMT12	93	50.365	ENSHBUG00000016412	trmt12	97	50.365	Haplochromis_burtoni
ENSCPOG00000026520	TRMT12	98	84.897	ENSHGLG00000020498	TRMT12	99	84.897	Heterocephalus_glaber_female
ENSCPOG00000026520	TRMT12	98	84.897	ENSHGLG00100020132	TRMT12	99	84.897	Heterocephalus_glaber_male
ENSCPOG00000026520	TRMT12	93	48.662	ENSHCOG00000005050	trmt12	98	51.111	Hippocampus_comes
ENSCPOG00000026520	TRMT12	95	51.185	ENSIPUG00000018011	trmt12	91	51.185	Ictalurus_punctatus
ENSCPOG00000026520	TRMT12	98	81.797	ENSSTOG00000030617	TRMT12	98	81.797	Ictidomys_tridecemlineatus
ENSCPOG00000026520	TRMT12	95	48.821	ENSKMAG00000000891	trmt12	99	48.821	Kryptolebias_marmoratus
ENSCPOG00000026520	TRMT12	93	48.905	ENSLBEG00000028712	trmt12	96	48.905	Labrus_bergylta
ENSCPOG00000026520	TRMT12	53	57.203	ENSLBEG00000017456	-	88	57.203	Labrus_bergylta
ENSCPOG00000026520	TRMT12	99	57.336	ENSLACG00000015869	TRMT12	99	57.336	Latimeria_chalumnae
ENSCPOG00000026520	TRMT12	96	55.059	ENSLOCG00000015290	trmt12	99	55.059	Lepisosteus_oculatus
ENSCPOG00000026520	TRMT12	99	81.093	ENSLAFG00000012519	TRMT12	100	81.093	Loxodonta_africana
ENSCPOG00000026520	TRMT12	99	82.579	ENSMMUG00000015490	TRMT12	99	82.579	Macaca_mulatta
ENSCPOG00000026520	TRMT12	96	49.528	ENSMAMG00000020311	trmt12	99	49.528	Mastacembelus_armatus
ENSCPOG00000026520	TRMT12	93	50.365	ENSMZEG00005007349	trmt12	97	50.365	Maylandia_zebra
ENSCPOG00000026520	TRMT12	99	57.859	ENSMGAG00000004174	TRMT12	98	57.859	Meleagris_gallopavo
ENSCPOG00000026520	TRMT12	91	50.743	ENSMMOG00000000412	trmt12	95	50.743	Mola_mola
ENSCPOG00000026520	TRMT12	99	66.819	ENSMODG00000021403	-	98	66.819	Monodelphis_domestica
ENSCPOG00000026520	TRMT12	99	67.277	ENSMODG00000011798	-	89	67.277	Monodelphis_domestica
ENSCPOG00000026520	TRMT12	95	49.409	ENSMALG00000008668	trmt12	99	49.409	Monopterus_albus
ENSCPOG00000026520	TRMT12	96	78.555	MGP_CAROLIEiJ_G0019820	Trmt12	96	78.555	Mus_caroli
ENSCPOG00000026520	TRMT12	95	79.245	ENSMUSG00000037085	Trmt12	95	79.245	Mus_musculus
ENSCPOG00000026520	TRMT12	96	78.505	MGP_PahariEiJ_G0019829	Trmt12	96	78.505	Mus_pahari
ENSCPOG00000026520	TRMT12	95	78.774	MGP_SPRETEiJ_G0020717	Trmt12	95	78.774	Mus_spretus
ENSCPOG00000026520	TRMT12	99	81.448	ENSMPUG00000019150	TRMT12	99	81.448	Mustela_putorius_furo
ENSCPOG00000026520	TRMT12	99	79.043	ENSMLUG00000003753	TRMT12	100	79.043	Myotis_lucifugus
ENSCPOG00000026520	TRMT12	99	78.588	ENSNGAG00000014548	Trmt12	100	78.588	Nannospalax_galili
ENSCPOG00000026520	TRMT12	92	50.245	ENSNBRG00000021510	trmt12	96	50.245	Neolamprologus_brichardi
ENSCPOG00000026520	TRMT12	99	69.476	ENSOPRG00000008067	TRMT12	98	69.476	Ochotona_princeps
ENSCPOG00000026520	TRMT12	99	86.105	ENSODEG00000018933	TRMT12	100	86.105	Octodon_degus
ENSCPOG00000026520	TRMT12	93	50.608	ENSONIG00000002614	trmt12	97	50.608	Oreochromis_niloticus
ENSCPOG00000026520	TRMT12	97	61.449	ENSOANG00000009987	TRMT12	99	61.449	Ornithorhynchus_anatinus
ENSCPOG00000026520	TRMT12	98	74.429	ENSOCUG00000026379	TRMT12	98	74.429	Oryctolagus_cuniculus
ENSCPOG00000026520	TRMT12	93	50.847	ENSORLG00000001280	trmt12	96	50.605	Oryzias_latipes
ENSCPOG00000026520	TRMT12	93	50.363	ENSORLG00020000708	trmt12	96	50.121	Oryzias_latipes_hni
ENSCPOG00000026520	TRMT12	93	51.582	ENSORLG00015012344	trmt12	96	51.582	Oryzias_latipes_hsok
ENSCPOG00000026520	TRMT12	95	50.237	ENSOMEG00000015267	trmt12	98	50.237	Oryzias_melastigma
ENSCPOG00000026520	TRMT12	99	80.410	ENSOGAG00000015845	TRMT12	100	80.410	Otolemur_garnettii
ENSCPOG00000026520	TRMT12	96	55.556	ENSPKIG00000004640	trmt12	99	55.718	Paramormyrops_kingsleyae
ENSCPOG00000026520	TRMT12	58	67.537	ENSPSIG00000003476	TRMT12	99	67.537	Pelodiscus_sinensis
ENSCPOG00000026520	TRMT12	93	46.845	ENSPMGG00000016356	trmt12	94	46.845	Periophthalmus_magnuspinnatus
ENSCPOG00000026520	TRMT12	98	67.972	ENSPCIG00000002967	TRMT12	90	67.972	Phascolarctos_cinereus
ENSCPOG00000026520	TRMT12	95	47.743	ENSPFOG00000016931	trmt12	98	47.743	Poecilia_formosa
ENSCPOG00000026520	TRMT12	93	48.675	ENSPLAG00000020621	trmt12	97	48.675	Poecilia_latipinna
ENSCPOG00000026520	TRMT12	93	49.635	ENSPMEG00000000818	trmt12	97	49.635	Poecilia_mexicana
ENSCPOG00000026520	TRMT12	93	49.392	ENSPREG00000011621	trmt12	96	49.392	Poecilia_reticulata
ENSCPOG00000026520	TRMT12	100	81.798	ENSPPYG00000018866	TRMT12	99	81.798	Pongo_abelii
ENSCPOG00000026520	TRMT12	99	77.551	ENSPCAG00000000556	TRMT12	99	77.551	Procavia_capensis
ENSCPOG00000026520	TRMT12	99	79.499	ENSPVAG00000009149	TRMT12	99	79.499	Pteropus_vampyrus
ENSCPOG00000026520	TRMT12	91	50.000	ENSPNYG00000010696	trmt12	99	50.000	Pundamilia_nyererei
ENSCPOG00000026520	TRMT12	95	49.649	ENSPNAG00000019028	trmt12	99	49.649	Pygocentrus_nattereri
ENSCPOG00000026520	TRMT12	96	80.186	ENSRNOG00000008978	Trmt12	98	80.186	Rattus_norvegicus
ENSCPOG00000026520	TRMT12	99	65.446	ENSSHAG00000003345	TRMT12	98	65.446	Sarcophilus_harrisii
ENSCPOG00000026520	TRMT12	95	52.113	ENSSFOG00015006090	trmt12	99	52.113	Scleropages_formosus
ENSCPOG00000026520	TRMT12	93	50.852	ENSSMAG00000013247	trmt12	97	50.852	Scophthalmus_maximus
ENSCPOG00000026520	TRMT12	88	52.174	ENSSDUG00000006168	trmt12	92	52.174	Seriola_dumerili
ENSCPOG00000026520	TRMT12	95	50.474	ENSSLDG00000025007	trmt12	99	50.474	Seriola_lalandi_dorsalis
ENSCPOG00000026520	TRMT12	95	61.432	ENSSPUG00000005321	TRMT12	96	61.432	Sphenodon_punctatus
ENSCPOG00000026520	TRMT12	93	50.122	ENSSPAG00000009435	trmt12	93	50.122	Stegastes_partitus
ENSCPOG00000026520	TRMT12	96	53.774	ENSTGUG00000002280	TRMT12	99	55.425	Taeniopygia_guttata
ENSCPOG00000026520	TRMT12	93	49.153	ENSTRUG00000011548	trmt12	95	49.153	Takifugu_rubripes
ENSCPOG00000026520	TRMT12	93	49.760	ENSTNIG00000016866	trmt12	96	49.760	Tetraodon_nigroviridis
ENSCPOG00000026520	TRMT12	98	80.876	ENSUAMG00000002067	TRMT12	99	80.876	Ursus_americanus
ENSCPOG00000026520	TRMT12	99	80.543	ENSVPAG00000006519	TRMT12	99	80.543	Vicugna_pacos
ENSCPOG00000026520	TRMT12	97	81.524	ENSVVUG00000016790	TRMT12	97	81.524	Vulpes_vulpes
ENSCPOG00000026520	TRMT12	96	57.611	ENSXETG00000009641	trmt12	96	57.611	Xenopus_tropicalis
ENSCPOG00000026520	TRMT12	93	49.879	ENSXCOG00000016505	trmt12	97	49.879	Xiphophorus_couchianus
ENSCPOG00000026520	TRMT12	93	49.272	ENSXMAG00000025318	trmt12	97	49.272	Xiphophorus_maculatus