EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000026604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1393 bases
Position: chrDS562861.1:20171439-20172831
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000018462	RRM_1	PF00076.22	2.8e-22	1	2
ENSCPOP00000018462	RRM_1	PF00076.22	2.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000024322	-	1230	-	ENSCPOP00000018462	409 (aa)	-	H0W658

Gene Model

Click here to download ENSCPOG00000026604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000026604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000026604	-	99	69.247	ENSCPOG00000038668	-	100	69.247
ENSCPOG00000026604	-	75	49.862	ENSCPOG00000000395	PSPC1	82	53.583
ENSCPOG00000026604	-	99	70.868	ENSCPOG00000010263	-	100	71.694
ENSCPOG00000026604	-	80	69.355	ENSCPOG00000036719	-	93	72.043
ENSCPOG00000026604	-	99	71.399	ENSCPOG00000023605	-	100	71.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000026604	-	99	71.882	ENSG00000147140	NONO	100	82.609	Homo_sapiens
ENSCPOG00000026604	-	81	50.627	ENSAPOG00000023320	nono	90	50.627	Acanthochromis_polyacanthus
ENSCPOG00000026604	-	99	72.669	ENSAMEG00000016057	NONO	100	73.517	Ailuropoda_melanoleuca
ENSCPOG00000026604	-	77	54.255	ENSACIG00000019987	nono	92	51.313	Amphilophus_citrinellus
ENSCPOG00000026604	-	81	50.627	ENSAOCG00000018863	nono	95	48.832	Amphiprion_ocellaris
ENSCPOG00000026604	-	69	55.689	ENSAPEG00000011383	nono	82	55.193	Amphiprion_percula
ENSCPOG00000026604	-	88	62.500	ENSAPLG00000002642	NONO	98	63.443	Anas_platyrhynchos
ENSCPOG00000026604	-	99	63.002	ENSACAG00000015026	NONO	99	64.482	Anolis_carolinensis
ENSCPOG00000026604	-	99	54.204	ENSANAG00000035751	-	98	58.599	Aotus_nancymaae
ENSCPOG00000026604	-	99	56.410	ENSANAG00000027089	-	99	58.761	Aotus_nancymaae
ENSCPOG00000026604	-	99	71.882	ENSANAG00000033266	-	100	72.727	Aotus_nancymaae
ENSCPOG00000026604	-	71	56.522	ENSACLG00000012045	nono	91	56.522	Astatotilapia_calliptera
ENSCPOG00000026604	-	89	49.881	ENSAMXG00000033933	nono	91	50.474	Astyanax_mexicanus
ENSCPOG00000026604	-	99	72.458	ENSBTAG00000012152	NONO	100	73.305	Bos_taurus
ENSCPOG00000026604	-	99	71.882	ENSCJAG00000036744	NONO	100	72.727	Callithrix_jacchus
ENSCPOG00000026604	-	99	60.722	ENSCAFG00000013766	-	100	62.754	Canis_familiaris
ENSCPOG00000026604	-	90	66.507	ENSCAFG00000030809	-	99	67.703	Canis_familiaris
ENSCPOG00000026604	-	99	71.610	ENSCAFG00000003207	-	100	72.458	Canis_familiaris
ENSCPOG00000026604	-	99	72.669	ENSCAFG00000017071	NONO	100	73.517	Canis_familiaris
ENSCPOG00000026604	-	99	72.281	ENSCAFG00020020298	-	100	73.134	Canis_lupus_dingo
ENSCPOG00000026604	-	99	72.458	ENSCHIG00000000365	-	100	73.305	Capra_hircus
ENSCPOG00000026604	-	75	65.940	ENSCHIG00000009602	-	89	65.940	Capra_hircus
ENSCPOG00000026604	-	99	70.851	ENSTSYG00000007423	-	99	71.702	Carlito_syrichta
ENSCPOG00000026604	-	99	69.011	ENSTSYG00000036306	-	100	70.989	Carlito_syrichta
ENSCPOG00000026604	-	99	68.282	ENSTSYG00000034207	-	99	68.282	Carlito_syrichta
ENSCPOG00000026604	-	72	63.746	ENSCAPG00000006522	-	84	65.152	Cavia_aperea
ENSCPOG00000026604	-	99	96.314	ENSCAPG00000002354	-	97	96.314	Cavia_aperea
ENSCPOG00000026604	-	99	53.675	ENSCAPG00000002723	-	100	54.444	Cavia_aperea
ENSCPOG00000026604	-	99	70.417	ENSCAPG00000011616	-	100	71.667	Cavia_aperea
ENSCPOG00000026604	-	99	65.021	ENSCATG00000039509	NONO	100	65.880	Cercocebus_atys
ENSCPOG00000026604	-	99	71.429	ENSCLAG00000003642	NONO	100	72.269	Chinchilla_lanigera
ENSCPOG00000026604	-	99	61.491	ENSCPBG00000016659	NONO	100	62.112	Chrysemys_picta_bellii
ENSCPOG00000026604	-	99	71.882	ENSCANG00000025310	NONO	100	72.727	Colobus_angolensis_palliatus
ENSCPOG00000026604	-	99	71.519	ENSCGRG00001000065	Nono	100	72.363	Cricetulus_griseus_chok1gshd
ENSCPOG00000026604	-	87	70.714	ENSCGRG00000004508	Nono	99	71.667	Cricetulus_griseus_crigri
ENSCPOG00000026604	-	85	51.861	ENSCSEG00000010708	nono	88	50.600	Cynoglossus_semilaevis
ENSCPOG00000026604	-	82	52.727	ENSCSEG00000008189	NONO	92	51.208	Cynoglossus_semilaevis
ENSCPOG00000026604	-	76	54.717	ENSCVAG00000003978	nono	94	50.469	Cyprinodon_variegatus
ENSCPOG00000026604	-	63	57.377	ENSDARG00000020482	nono	100	52.672	Danio_rerio
ENSCPOG00000026604	-	73	58.333	ENSDNOG00000031430	-	100	58.333	Dasypus_novemcinctus
ENSCPOG00000026604	-	51	81.429	ENSDNOG00000003267	-	86	81.905	Dasypus_novemcinctus
ENSCPOG00000026604	-	63	55.479	ENSDNOG00000032215	-	99	55.556	Dasypus_novemcinctus
ENSCPOG00000026604	-	99	70.763	ENSDORG00000009294	Nono	100	71.610	Dipodomys_ordii
ENSCPOG00000026604	-	84	69.188	ENSETEG00000013823	NONO	86	70.308	Echinops_telfairi
ENSCPOG00000026604	-	99	72.669	ENSECAG00000008502	NONO	100	73.517	Equus_caballus
ENSCPOG00000026604	-	99	70.551	ENSEEUG00000014404	NONO	100	71.398	Erinaceus_europaeus
ENSCPOG00000026604	-	99	48.117	ENSELUG00000001083	nono	100	47.908	Esox_lucius
ENSCPOG00000026604	-	99	72.669	ENSFCAG00000043511	-	100	73.517	Felis_catus
ENSCPOG00000026604	-	99	60.573	ENSFALG00000011765	NONO	100	59.692	Ficedula_albicollis
ENSCPOG00000026604	-	99	72.458	ENSFDAG00000012809	-	100	73.305	Fukomys_damarensis
ENSCPOG00000026604	-	99	65.991	ENSFDAG00000006143	-	100	65.991	Fukomys_damarensis
ENSCPOG00000026604	-	72	55.874	ENSFHEG00000009714	nono	90	53.571	Fundulus_heteroclitus
ENSCPOG00000026604	-	99	60.455	ENSGALG00000005507	NONO	100	61.284	Gallus_gallus
ENSCPOG00000026604	-	71	57.184	ENSGAFG00000011460	nono	94	52.336	Gambusia_affinis
ENSCPOG00000026604	-	77	51.882	ENSGACG00000011824	nono	94	50.118	Gasterosteus_aculeatus
ENSCPOG00000026604	-	99	62.869	ENSGAGG00000025400	-	91	63.502	Gopherus_agassizii
ENSCPOG00000026604	-	94	70.000	ENSGGOG00000006194	NONO	91	79.137	Gorilla_gorilla
ENSCPOG00000026604	-	99	63.462	ENSGGOG00000036327	-	99	64.744	Gorilla_gorilla
ENSCPOG00000026604	-	77	54.521	ENSHBUG00000010741	nono	92	51.551	Haplochromis_burtoni
ENSCPOG00000026604	-	99	72.093	ENSHGLG00000005550	NONO	100	72.939	Heterocephalus_glaber_female
ENSCPOG00000026604	-	99	72.093	ENSHGLG00100013511	NONO	100	72.939	Heterocephalus_glaber_male
ENSCPOG00000026604	-	80	52.987	ENSHCOG00000016441	nono	90	53.525	Hippocampus_comes
ENSCPOG00000026604	-	81	52.152	ENSIPUG00000018271	nono	91	51.442	Ictalurus_punctatus
ENSCPOG00000026604	-	99	72.669	ENSSTOG00000015869	NONO	100	73.517	Ictidomys_tridecemlineatus
ENSCPOG00000026604	-	99	59.519	ENSJJAG00000001971	-	100	59.519	Jaculus_jaculus
ENSCPOG00000026604	-	99	71.822	ENSJJAG00000017151	-	100	72.669	Jaculus_jaculus
ENSCPOG00000026604	-	99	45.591	ENSKMAG00000002798	nono	93	48.941	Kryptolebias_marmoratus
ENSCPOG00000026604	-	82	52.405	ENSLBEG00000022623	nono	86	54.278	Labrus_bergylta
ENSCPOG00000026604	-	73	59.827	ENSLACG00000000598	NONO	94	57.431	Latimeria_chalumnae
ENSCPOG00000026604	-	99	50.431	ENSLOCG00000014739	nono	100	50.844	Lepisosteus_oculatus
ENSCPOG00000026604	-	99	71.941	ENSLAFG00000013422	NONO	100	72.363	Loxodonta_africana
ENSCPOG00000026604	-	99	71.882	ENSMFAG00000041557	NONO	100	72.727	Macaca_fascicularis
ENSCPOG00000026604	-	78	70.833	ENSMMUG00000020481	NONO	100	71.875	Macaca_mulatta
ENSCPOG00000026604	-	99	71.882	ENSMNEG00000009698	NONO	100	72.727	Macaca_nemestrina
ENSCPOG00000026604	-	99	71.882	ENSMLEG00000042452	NONO	100	72.727	Mandrillus_leucophaeus
ENSCPOG00000026604	-	76	53.951	ENSMAMG00000007314	nono	94	49.292	Mastacembelus_armatus
ENSCPOG00000026604	-	71	56.522	ENSMZEG00005010199	nono	91	56.522	Maylandia_zebra
ENSCPOG00000026604	-	88	62.736	ENSMGAG00000008869	NONO	98	63.679	Meleagris_gallopavo
ENSCPOG00000026604	-	99	71.218	ENSMAUG00000016243	Nono	100	71.429	Mesocricetus_auratus
ENSCPOG00000026604	-	99	71.822	ENSMICG00000000232	NONO	100	72.669	Microcebus_murinus
ENSCPOG00000026604	-	91	70.709	ENSMOCG00000005532	-	96	71.824	Microtus_ochrogaster
ENSCPOG00000026604	-	99	62.121	ENSMOCG00000021293	-	100	63.420	Microtus_ochrogaster
ENSCPOG00000026604	-	100	58.734	ENSMOCG00000020099	-	96	60.699	Microtus_ochrogaster
ENSCPOG00000026604	-	77	54.011	ENSMMOG00000015503	nono	77	54.011	Mola_mola
ENSCPOG00000026604	-	91	66.437	ENSMODG00000004445	NONO	99	67.206	Monodelphis_domestica
ENSCPOG00000026604	-	80	52.880	ENSMALG00000001310	nono	90	52.880	Monopterus_albus
ENSCPOG00000026604	-	99	71.368	ENSMUSG00000031311	Nono	100	74.490	Mus_musculus
ENSCPOG00000026604	-	99	71.069	MGP_PahariEiJ_G0031826	Nono	100	71.279	Mus_pahari
ENSCPOG00000026604	-	99	72.669	ENSMPUG00000004937	NONO	100	73.517	Mustela_putorius_furo
ENSCPOG00000026604	-	99	72.246	ENSMLUG00000002489	NONO	89	73.093	Myotis_lucifugus
ENSCPOG00000026604	-	99	70.551	ENSNGAG00000010857	Nono	100	71.610	Nannospalax_galili
ENSCPOG00000026604	-	77	54.787	ENSNBRG00000017083	nono	92	51.790	Neolamprologus_brichardi
ENSCPOG00000026604	-	99	71.795	ENSNLEG00000001278	NONO	100	71.875	Nomascus_leucogenys
ENSCPOG00000026604	-	99	62.579	ENSMEUG00000004294	NONO	100	62.791	Notamacropus_eugenii
ENSCPOG00000026604	-	58	82.353	ENSOPRG00000001139	-	68	82.353	Ochotona_princeps
ENSCPOG00000026604	-	96	57.143	ENSODEG00000004982	-	99	58.411	Octodon_degus
ENSCPOG00000026604	-	99	66.949	ENSODEG00000002224	-	100	68.856	Octodon_degus
ENSCPOG00000026604	-	99	54.120	ENSODEG00000011878	-	100	54.875	Octodon_degus
ENSCPOG00000026604	-	89	53.598	ENSODEG00000000530	-	89	51.887	Octodon_degus
ENSCPOG00000026604	-	99	69.011	ENSODEG00000002994	-	100	69.890	Octodon_degus
ENSCPOG00000026604	-	77	54.787	ENSONIG00000020497	nono	92	51.790	Oreochromis_niloticus
ENSCPOG00000026604	-	99	51.732	ENSOCUG00000024801	-	97	51.963	Oryctolagus_cuniculus
ENSCPOG00000026604	-	99	67.086	ENSOCUG00000021848	-	90	71.296	Oryctolagus_cuniculus
ENSCPOG00000026604	-	95	47.216	ENSORLG00000012801	nono	94	48.706	Oryzias_latipes
ENSCPOG00000026604	-	60	57.241	ENSORLG00020003761	nono	80	52.825	Oryzias_latipes_hni
ENSCPOG00000026604	-	95	47.216	ENSORLG00015018033	nono	94	48.706	Oryzias_latipes_hsok
ENSCPOG00000026604	-	95	46.875	ENSOMEG00000012702	nono	94	48.706	Oryzias_melastigma
ENSCPOG00000026604	-	99	72.304	ENSOGAG00000004834	NONO	100	73.150	Otolemur_garnettii
ENSCPOG00000026604	-	99	72.669	ENSOARG00000016966	NONO	99	73.517	Ovis_aries
ENSCPOG00000026604	-	99	72.009	ENSPPAG00000032487	NONO	100	72.727	Pan_paniscus
ENSCPOG00000026604	-	99	63.214	ENSPPAG00000041394	-	99	64.905	Pan_paniscus
ENSCPOG00000026604	-	99	72.669	ENSPPRG00000024537	-	100	73.517	Panthera_pardus
ENSCPOG00000026604	-	99	72.458	ENSPTIG00000016068	-	100	73.305	Panthera_tigris_altaica
ENSCPOG00000026604	-	99	63.002	ENSPTRG00000051228	-	100	64.693	Pan_troglodytes
ENSCPOG00000026604	-	99	72.009	ENSPTRG00000022010	NONO	100	72.727	Pan_troglodytes
ENSCPOG00000026604	-	99	55.814	ENSPANG00000035017	-	99	56.025	Papio_anubis
ENSCPOG00000026604	-	99	71.882	ENSPANG00000013979	NONO	100	72.727	Papio_anubis
ENSCPOG00000026604	-	89	49.878	ENSPKIG00000019475	-	92	59.341	Paramormyrops_kingsleyae
ENSCPOG00000026604	-	90	50.000	ENSPKIG00000014500	nono	100	50.641	Paramormyrops_kingsleyae
ENSCPOG00000026604	-	99	63.080	ENSPSIG00000010678	NONO	99	63.080	Pelodiscus_sinensis
ENSCPOG00000026604	-	84	48.649	ENSPMGG00000023030	nono	87	51.823	Periophthalmus_magnuspinnatus
ENSCPOG00000026604	-	99	71.308	ENSPEMG00000011150	Nono	100	72.152	Peromyscus_maniculatus_bairdii
ENSCPOG00000026604	-	99	65.328	ENSPCIG00000026515	NONO	100	65.828	Phascolarctos_cinereus
ENSCPOG00000026604	-	71	55.623	ENSPFOG00000016436	nono	94	50.611	Poecilia_formosa
ENSCPOG00000026604	-	71	56.034	ENSPLAG00000017492	nono	93	51.402	Poecilia_latipinna
ENSCPOG00000026604	-	80	53.506	ENSPMEG00000021530	nono	85	54.400	Poecilia_mexicana
ENSCPOG00000026604	-	81	53.627	ENSPREG00000010014	nono	93	51.636	Poecilia_reticulata
ENSCPOG00000026604	-	99	71.459	ENSPPYG00000020451	NONO	100	72.304	Pongo_abelii
ENSCPOG00000026604	-	99	71.069	ENSPCAG00000002541	NONO	100	71.908	Procavia_capensis
ENSCPOG00000026604	-	99	72.669	ENSPCOG00000008197	NONO	100	73.517	Propithecus_coquereli
ENSCPOG00000026604	-	99	72.034	ENSPVAG00000016503	NONO	100	72.881	Pteropus_vampyrus
ENSCPOG00000026604	-	72	53.779	ENSPNAG00000008232	nono	82	49.065	Pygocentrus_nattereri
ENSCPOG00000026604	-	99	69.874	ENSRNOG00000003689	Nono	100	71.130	Rattus_norvegicus
ENSCPOG00000026604	-	74	69.837	ENSRBIG00000037966	NONO	100	70.924	Rhinopithecus_bieti
ENSCPOG00000026604	-	99	71.670	ENSRROG00000043203	NONO	100	72.516	Rhinopithecus_roxellana
ENSCPOG00000026604	-	99	59.785	ENSSBOG00000018932	-	99	60.430	Saimiri_boliviensis_boliviensis
ENSCPOG00000026604	-	99	71.670	ENSSBOG00000032772	-	100	72.516	Saimiri_boliviensis_boliviensis
ENSCPOG00000026604	-	99	68.288	ENSSBOG00000027683	-	99	69.133	Saimiri_boliviensis_boliviensis
ENSCPOG00000026604	-	99	65.272	ENSSHAG00000010195	NONO	100	66.109	Sarcophilus_harrisii
ENSCPOG00000026604	-	99	50.000	ENSSFOG00015008964	nono	90	59.633	Scleropages_formosus
ENSCPOG00000026604	-	89	47.470	ENSSFOG00015000137	-	91	49.507	Scleropages_formosus
ENSCPOG00000026604	-	89	48.931	ENSSDUG00000021886	nono	94	49.180	Seriola_dumerili
ENSCPOG00000026604	-	89	48.931	ENSSLDG00000012392	nono	94	49.180	Seriola_lalandi_dorsalis
ENSCPOG00000026604	-	99	68.008	ENSSARG00000007959	NONO	100	67.857	Sorex_araneus
ENSCPOG00000026604	-	78	61.399	ENSSPUG00000003116	NONO	100	62.435	Sphenodon_punctatus
ENSCPOG00000026604	-	77	52.941	ENSSPAG00000012663	nono	95	48.946	Stegastes_partitus
ENSCPOG00000026604	-	99	72.669	ENSSSCG00000023245	NONO	100	73.517	Sus_scrofa
ENSCPOG00000026604	-	99	62.105	ENSTGUG00000007048	NONO	100	62.105	Taeniopygia_guttata
ENSCPOG00000026604	-	72	55.874	ENSTRUG00000005554	nono	91	51.544	Takifugu_rubripes
ENSCPOG00000026604	-	99	72.669	ENSTTRG00000009605	NONO	100	73.517	Tursiops_truncatus
ENSCPOG00000026604	-	99	72.281	ENSUAMG00000008220	NONO	100	73.134	Ursus_americanus
ENSCPOG00000026604	-	99	72.669	ENSUMAG00000021550	NONO	100	73.517	Ursus_maritimus
ENSCPOG00000026604	-	99	72.669	ENSVPAG00000002272	NONO	100	73.517	Vicugna_pacos
ENSCPOG00000026604	-	99	70.763	ENSVVUG00000003390	-	100	71.610	Vulpes_vulpes
ENSCPOG00000026604	-	99	56.871	ENSXETG00000020868	nono	99	56.448	Xenopus_tropicalis
ENSCPOG00000026604	-	71	56.897	ENSXCOG00000015587	nono	94	52.103	Xiphophorus_couchianus
ENSCPOG00000026604	-	71	56.897	ENSXMAG00000019883	nono	94	52.103	Xiphophorus_maculatus