EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000026899 (Gene tree)
Gene ID: 100723309
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 12124 bases
Position: chrDS563039.1:103012-115135
Accession: 100723309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000015727	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020080	-	669	XM_003461579	ENSCPOP00000015727	222 (aa)	XP_003461627	H0VYE5

Gene Model

Click here to download ENSCPOG00000026899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000026899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000026899	-	65	30.000	ENSCPOG00000034906	MRAS	77	31.056
ENSCPOG00000026899	-	70	37.654	ENSCPOG00000000119	RAB33A	67	37.654
ENSCPOG00000026899	-	67	30.128	ENSCPOG00000001449	RAB34	60	30.128
ENSCPOG00000026899	-	73	33.136	ENSCPOG00000008172	RAB22A	86	33.136
ENSCPOG00000026899	-	84	35.417	ENSCPOG00000030742	RAB33B	79	35.417
ENSCPOG00000026899	-	51	38.261	ENSCPOG00000034818	RAB5B	53	38.261
ENSCPOG00000026899	-	69	30.380	ENSCPOG00000011491	-	78	30.380
ENSCPOG00000026899	-	88	30.000	ENSCPOG00000038813	RAB6B	93	30.000
ENSCPOG00000026899	-	69	35.220	ENSCPOG00000022689	RAB12	76	35.220
ENSCPOG00000026899	-	67	37.419	ENSCPOG00000014868	RAB1B	76	37.419
ENSCPOG00000026899	-	84	33.503	ENSCPOG00000034570	RAB7A	94	33.503
ENSCPOG00000026899	-	69	30.380	ENSCPOG00000002472	RAB25	74	30.380
ENSCPOG00000026899	-	82	30.851	ENSCPOG00000025645	RAB37	86	30.851
ENSCPOG00000026899	-	87	32.500	ENSCPOG00000015437	RAB1A	93	32.500
ENSCPOG00000026899	-	76	34.463	ENSCPOG00000005047	RAB30	86	34.463
ENSCPOG00000026899	-	74	36.686	ENSCPOG00000036631	RAB14	77	36.686
ENSCPOG00000026899	-	69	33.125	ENSCPOG00000039524	RAB39B	75	33.125
ENSCPOG00000026899	-	67	37.419	ENSCPOG00000037599	RAB11A	71	37.419
ENSCPOG00000026899	-	67	33.333	ENSCPOG00000026575	RAB2B	77	33.557
ENSCPOG00000026899	-	54	30.159	ENSCPOG00000038193	ARFRP1	62	30.159
ENSCPOG00000026899	-	65	38.255	ENSCPOG00000032827	RAB18	72	38.255
ENSCPOG00000026899	-	69	36.478	ENSCPOG00000030154	RAB11B	72	36.478
ENSCPOG00000026899	-	74	33.908	ENSCPOG00000030676	RAB9A	86	33.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000026899	-	98	90.323	ENSG00000079974	RABL2B	100	93.939	Homo_sapiens
ENSCPOG00000026899	-	98	90.323	ENSG00000144134	RABL2A	98	94.949	Homo_sapiens
ENSCPOG00000026899	-	97	75.814	ENSAPOG00000023708	rabl2	96	75.814	Acanthochromis_polyacanthus
ENSCPOG00000026899	-	98	86.425	ENSAMEG00000003173	-	97	86.425	Ailuropoda_melanoleuca
ENSCPOG00000026899	-	92	75.490	ENSACIG00000000670	rabl2	92	75.490	Amphilophus_citrinellus
ENSCPOG00000026899	-	97	76.279	ENSAOCG00000008069	rabl2	96	76.279	Amphiprion_ocellaris
ENSCPOG00000026899	-	97	75.814	ENSAPEG00000003164	rabl2	96	75.814	Amphiprion_percula
ENSCPOG00000026899	-	94	76.442	ENSATEG00000001111	rabl2	94	76.442	Anabas_testudineus
ENSCPOG00000026899	-	74	85.976	ENSACAG00000000418	-	93	85.976	Anolis_carolinensis
ENSCPOG00000026899	-	98	90.323	ENSANAG00000021001	-	95	90.323	Aotus_nancymaae
ENSCPOG00000026899	-	97	74.884	ENSACLG00000025632	rabl2	96	74.884	Astatotilapia_calliptera
ENSCPOG00000026899	-	96	77.465	ENSAMXG00000040611	rabl2	96	77.465	Astyanax_mexicanus
ENSCPOG00000026899	-	98	85.253	ENSBTAG00000004876	RABL2B	96	85.321	Bos_taurus
ENSCPOG00000026899	-	98	90.323	ENSCJAG00000018414	-	95	90.323	Callithrix_jacchus
ENSCPOG00000026899	-	97	90.278	ENSCAFG00020006938	-	97	90.278	Canis_lupus_dingo
ENSCPOG00000026899	-	97	83.408	ENSCHIG00000000591	-	97	83.857	Capra_hircus
ENSCPOG00000026899	-	98	86.636	ENSTSYG00000004323	-	95	86.636	Carlito_syrichta
ENSCPOG00000026899	-	98	91.705	ENSCCAG00000025944	-	95	91.705	Cebus_capucinus
ENSCPOG00000026899	-	98	88.479	ENSCATG00000034307	-	95	88.479	Cercocebus_atys
ENSCPOG00000026899	-	99	94.595	ENSCLAG00000017218	-	99	94.595	Chinchilla_lanigera
ENSCPOG00000026899	-	99	89.041	ENSCSAG00000004698	-	95	89.041	Chlorocebus_sabaeus
ENSCPOG00000026899	-	92	82.843	ENSCPBG00000011715	-	91	82.843	Chrysemys_picta_bellii
ENSCPOG00000026899	-	81	66.667	ENSCING00000004961	-	84	66.667	Ciona_intestinalis
ENSCPOG00000026899	-	81	68.333	ENSCSAVG00000006042	-	87	68.333	Ciona_savignyi
ENSCPOG00000026899	-	98	88.018	ENSCANG00000030879	-	95	88.018	Colobus_angolensis_palliatus
ENSCPOG00000026899	-	98	88.479	ENSCGRG00001021894	Rabl2	97	88.479	Cricetulus_griseus_chok1gshd
ENSCPOG00000026899	-	91	75.862	ENSCSEG00000005479	rabl2	99	72.646	Cynoglossus_semilaevis
ENSCPOG00000026899	-	91	76.847	ENSCVAG00000011432	rabl2	93	76.847	Cyprinodon_variegatus
ENSCPOG00000026899	-	92	75.980	ENSDARG00000063321	rabl2	93	75.980	Danio_rerio
ENSCPOG00000026899	-	99	90.000	ENSDNOG00000035151	-	99	90.000	Dasypus_novemcinctus
ENSCPOG00000026899	-	98	92.627	ENSDORG00000000003	Rabl2	97	92.627	Dipodomys_ordii
ENSCPOG00000026899	-	98	87.558	ENSEASG00005008239	-	97	87.558	Equus_asinus_asinus
ENSCPOG00000026899	-	98	87.558	ENSECAG00000026942	-	97	87.558	Equus_caballus
ENSCPOG00000026899	-	99	89.593	ENSFCAG00000033642	-	99	89.593	Felis_catus
ENSCPOG00000026899	-	98	93.088	ENSFDAG00000002113	-	97	93.088	Fukomys_damarensis
ENSCPOG00000026899	-	100	71.616	ENSFHEG00000015015	rabl2	87	71.616	Fundulus_heteroclitus
ENSCPOG00000026899	-	89	75.635	ENSGMOG00000018928	rabl2	100	75.635	Gadus_morhua
ENSCPOG00000026899	-	96	78.037	ENSGALG00000032458	RABL2B	96	78.037	Gallus_gallus
ENSCPOG00000026899	-	91	77.114	ENSGAFG00000005188	rabl2	91	76.961	Gambusia_affinis
ENSCPOG00000026899	-	96	74.178	ENSGACG00000012474	rabl2	96	74.178	Gasterosteus_aculeatus
ENSCPOG00000026899	-	97	74.884	ENSHBUG00000010964	rabl2	96	74.884	Haplochromis_burtoni
ENSCPOG00000026899	-	97	93.023	ENSHGLG00000005750	-	96	93.023	Heterocephalus_glaber_female
ENSCPOG00000026899	-	97	93.023	ENSHGLG00100016281	-	96	93.023	Heterocephalus_glaber_male
ENSCPOG00000026899	-	98	92.166	ENSSTOG00000002723	-	97	92.166	Ictidomys_tridecemlineatus
ENSCPOG00000026899	-	99	87.727	ENSJJAG00000010792	Rabl2	99	87.727	Jaculus_jaculus
ENSCPOG00000026899	-	95	76.415	ENSKMAG00000012723	rabl2	95	76.415	Kryptolebias_marmoratus
ENSCPOG00000026899	-	94	76.442	ENSLBEG00000003644	rabl2	93	76.442	Labrus_bergylta
ENSCPOG00000026899	-	95	79.717	ENSLACG00000003722	rabl2	94	79.717	Latimeria_chalumnae
ENSCPOG00000026899	-	98	77.880	ENSLOCG00000016767	rabl2	96	77.880	Lepisosteus_oculatus
ENSCPOG00000026899	-	98	89.862	ENSMFAG00000044775	-	95	89.862	Macaca_fascicularis
ENSCPOG00000026899	-	98	89.862	ENSMMUG00000022914	RABL2B	95	89.862	Macaca_mulatta
ENSCPOG00000026899	-	98	89.401	ENSMNEG00000028460	-	95	89.401	Macaca_nemestrina
ENSCPOG00000026899	-	98	88.479	ENSMLEG00000032621	-	95	88.479	Mandrillus_leucophaeus
ENSCPOG00000026899	-	94	75.962	ENSMAMG00000008168	rabl2	93	75.962	Mastacembelus_armatus
ENSCPOG00000026899	-	89	77.665	ENSMZEG00005019758	rabl2	91	77.665	Maylandia_zebra
ENSCPOG00000026899	-	98	86.636	ENSMAUG00000010955	Rabl2	98	86.636	Mesocricetus_auratus
ENSCPOG00000026899	-	98	92.627	ENSMICG00000031301	-	95	92.627	Microcebus_murinus
ENSCPOG00000026899	-	98	87.097	ENSMOCG00000002775	Rabl2	97	87.097	Microtus_ochrogaster
ENSCPOG00000026899	-	95	86.792	ENSMODG00000010838	-	96	86.792	Monodelphis_domestica
ENSCPOG00000026899	-	95	75.000	ENSMALG00000005944	rabl2	95	75.000	Monopterus_albus
ENSCPOG00000026899	-	96	85.047	MGP_CAROLIEiJ_G0020176	Rabl2	95	85.047	Mus_caroli
ENSCPOG00000026899	-	96	85.514	ENSMUSG00000022621	Rabl2	96	85.514	Mus_musculus
ENSCPOG00000026899	-	96	85.981	MGP_PahariEiJ_G0020181	Rabl2	96	85.981	Mus_pahari
ENSCPOG00000026899	-	96	85.047	MGP_SPRETEiJ_G0021073	Rabl2	96	85.047	Mus_spretus
ENSCPOG00000026899	-	97	88.889	ENSMPUG00000001806	-	97	88.889	Mustela_putorius_furo
ENSCPOG00000026899	-	96	86.449	ENSNGAG00000012843	Rabl2	93	86.449	Nannospalax_galili
ENSCPOG00000026899	-	97	74.884	ENSNBRG00000000489	rabl2	96	74.884	Neolamprologus_brichardi
ENSCPOG00000026899	-	98	91.244	ENSNLEG00000030435	-	95	91.244	Nomascus_leucogenys
ENSCPOG00000026899	-	99	93.243	ENSODEG00000015650	-	99	93.243	Octodon_degus
ENSCPOG00000026899	-	97	75.349	ENSONIG00000014885	rabl2	96	75.349	Oreochromis_niloticus
ENSCPOG00000026899	-	94	72.596	ENSORLG00000009874	rabl2	92	72.596	Oryzias_latipes
ENSCPOG00000026899	-	94	72.596	ENSORLG00020001721	rabl2	92	72.596	Oryzias_latipes_hni
ENSCPOG00000026899	-	94	72.596	ENSORLG00015014268	rabl2	92	72.596	Oryzias_latipes_hsok
ENSCPOG00000026899	-	94	75.000	ENSOMEG00000008576	rabl2	96	75.000	Oryzias_melastigma
ENSCPOG00000026899	-	98	92.627	ENSOGAG00000009123	-	95	92.627	Otolemur_garnettii
ENSCPOG00000026899	-	98	88.128	ENSPPRG00000014642	-	96	88.128	Panthera_pardus
ENSCPOG00000026899	-	99	89.593	ENSPTIG00000018747	-	99	89.593	Panthera_tigris_altaica
ENSCPOG00000026899	-	98	85.022	ENSPTRG00000014555	-	95	85.022	Pan_troglodytes
ENSCPOG00000026899	-	98	85.022	ENSPANG00000036121	-	95	85.022	Papio_anubis
ENSCPOG00000026899	-	91	79.803	ENSPKIG00000025372	rabl2	90	79.803	Paramormyrops_kingsleyae
ENSCPOG00000026899	-	92	84.390	ENSPSIG00000014041	-	91	84.390	Pelodiscus_sinensis
ENSCPOG00000026899	-	89	75.127	ENSPMGG00000012946	rabl2	96	75.127	Periophthalmus_magnuspinnatus
ENSCPOG00000026899	-	98	87.097	ENSPEMG00000024045	Rabl2	97	87.097	Peromyscus_maniculatus_bairdii
ENSCPOG00000026899	-	89	89.899	ENSPCIG00000012436	-	81	89.899	Phascolarctos_cinereus
ENSCPOG00000026899	-	95	75.117	ENSPFOG00000017960	rabl2	96	75.117	Poecilia_formosa
ENSCPOG00000026899	-	95	75.829	ENSPLAG00000015685	rabl2	96	75.829	Poecilia_latipinna
ENSCPOG00000026899	-	95	75.829	ENSPMEG00000004703	rabl2	96	75.829	Poecilia_mexicana
ENSCPOG00000026899	-	89	77.665	ENSPREG00000014761	rabl2	94	79.894	Poecilia_reticulata
ENSCPOG00000026899	-	98	91.705	ENSPPYG00000012000	-	95	91.705	Pongo_abelii
ENSCPOG00000026899	-	98	92.627	ENSPCOG00000024865	-	95	92.627	Propithecus_coquereli
ENSCPOG00000026899	-	97	83.260	ENSPVAG00000004539	-	95	83.260	Pteropus_vampyrus
ENSCPOG00000026899	-	97	74.884	ENSPNYG00000004845	rabl2	96	74.884	Pundamilia_nyererei
ENSCPOG00000026899	-	91	80.100	ENSPNAG00000024254	rabl2	96	77.465	Pygocentrus_nattereri
ENSCPOG00000026899	-	96	87.383	ENSRNOG00000013947	Rabl2	86	87.383	Rattus_norvegicus
ENSCPOG00000026899	-	98	88.940	ENSRBIG00000033607	-	95	88.940	Rhinopithecus_bieti
ENSCPOG00000026899	-	98	89.401	ENSRROG00000031130	-	95	89.401	Rhinopithecus_roxellana
ENSCPOG00000026899	-	98	92.627	ENSSBOG00000033266	-	95	92.627	Saimiri_boliviensis_boliviensis
ENSCPOG00000026899	-	92	76.961	ENSSFOG00015020738	rabl2	95	75.000	Scleropages_formosus
ENSCPOG00000026899	-	99	74.661	ENSSMAG00000004606	rabl2	99	74.661	Scophthalmus_maximus
ENSCPOG00000026899	-	92	77.073	ENSSDUG00000014765	rabl2	92	77.073	Seriola_dumerili
ENSCPOG00000026899	-	77	89.412	ENSSSCG00000025041	-	100	89.412	Sus_scrofa
ENSCPOG00000026899	-	89	78.680	ENSTGUG00000016028	-	95	78.680	Taeniopygia_guttata
ENSCPOG00000026899	-	95	75.000	ENSTRUG00000012454	rabl2	95	75.000	Takifugu_rubripes
ENSCPOG00000026899	-	95	74.528	ENSTNIG00000017951	rabl2	95	74.528	Tetraodon_nigroviridis
ENSCPOG00000026899	-	91	89.109	ENSUAMG00000015761	-	90	89.109	Ursus_americanus
ENSCPOG00000026899	-	98	88.940	ENSUMAG00000017116	-	97	88.940	Ursus_maritimus
ENSCPOG00000026899	-	97	89.352	ENSVVUG00000025761	-	97	89.352	Vulpes_vulpes
ENSCPOG00000026899	-	95	76.995	ENSXETG00000015712	rabl2b	95	76.995	Xenopus_tropicalis
ENSCPOG00000026899	-	88	80.513	ENSXMAG00000004569	rabl2	91	78.325	Xiphophorus_maculatus